Contig 006707:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF045P01+                                                    GGCAGCATTCCCATTATT
                      ____________________________________________________________
consensus                                                       GGCAGCATTCCCATTATT
 
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rJMSF045P01+          TCTCCTAAATAAGCAAAAACCCTCTTTTGTTCTCAACTACTTACGATGGCTTCTTCTTCT
JMSF045P01-                                                            CTTCTTCTTCT
                      ____________________________________________________________
consensus             TCTCCTAAATAAGCAAAAACCCTCTTTTGTTCTCAACTACTTACGATGGCTTCTTCTTCT
 
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rJMSF045P01+          GTTCGTTTGGTTGCAATTGCCTCACTCTTGGTGATGCTCTTCATGGCCTCTGGTTTGCTC
JMSF045P01-           GTTCGTTTGGTTGCAATTGCCTCACTCTTGGTGATGCTCTTCATGGCCTCTGGTTTGCTC
                      ____________________________________________________________
consensus             GTTCGTTTGGTTGCAATTGCCTCACTCTTGGTGATGCTCTTCATGGCCTCTGGTTTGCTC
 
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rJMSF045P01+          TCTCACTTTCTGATTTTCTCCATTATTATTATTATTATTATTTTTTGATGATTGATATGA
JMSF045P01-           TCTCACTTTCTGATTTTCTCCATTATTATTATTATTATTATTTTTTGATGATTGATATGA
                      ____________________________________________________________
consensus             TCTCACTTTCTGATTTTCTCCATTATTATTATTATTATTATTTTTTGATGATTGATATGA
 
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rJMSF045P01+          GTGCCAATTATCGGATCTGATCTAATTCTGCAGGGATGGGAACAATGGCTGCCGGTACCA
JMSF045P01-           GTGCCAATTATCGGATCTGATCTAATTCTGCAGGGATGGGAACAATGGCTGCCGGTACCA
                      ____________________________________________________________
consensus             GTGCCAATTATCGGATCTGATCTAATTCTGCAGGGATGGGAACAATGGCTGCCGGTACCA
 
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rJMSF045P01+          GAATGTGCACGTCGCAGAGTGAACACTACAGGGGGAATTGTCTTTTAATCAACCAAAATT
JMSF045P01-           GAATGTGCACGTCGCAGAGTGAACACTACAGGGGGAATTGTCTTTTAATCAACCAAAATT
                      ____________________________________________________________
consensus             GAATGTGCACGTCGCAGAGTGAACACTACAGGGGGAATTGTCTTTTAATCAACCAAAATT
 
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rJMSF045P01+          CCCGCAACAACTGCAATAGAATTTGCAGGGATACAGAGGGGTTTACCTCCGGGGATTGCA
JMSF045P01-           CCCGCAACAACTGCAATAGAATTTGCAGGGATACAGAGGGGTTTACCTCCGGGGATTGCA
                      ____________________________________________________________
consensus             CCCGCAACAACTGCAATAGAATTTGCAGGGATACAGAGGGGTTTACCTCCGGGGATTGCA
 
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rJMSF045P01+          CCATTACCGCTCAGGCAAGGCGCATCTGCAGCTGCTTCATGCCTTGCCATTGCTAAATAA
JMSF045P01-           CCATTACCGCTCAGGCAAGGCGCATCTGCAGCTGCTTCATGCCTTGCCATTGCTAAATAA
                      ____________________________________________________________
consensus             CCATTACCGCTCAGGCAAGGCGCATCTGCAGCTGCTTCATGCCTTGCCATTGCTAAATAA
 
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rJMSF045P01+          CCAACATTGCTTGCTTCAACTTCAATTCGATCAGTGTTTTTATATATATAGCTAAATAAA
JMSF045P01-           CCAACATTGCTTGCTTCAACTTCAATTCGATCAGTGTTTTTATATATATAGCTAAATAAA
                      ____________________________________________________________
consensus             CCAACATTGCTTGCTTCAACTTCAATTCGATCAGTGTTTTTATATATATAGCTAAATAAA
 
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rJMSF045P01+          TGTCCCAAATAATATAATCCAAACATGCATGTGCATGCATGGTACCTGGAGTTTGTCTTC
JMSF045P01-           TGTCCCAAATAATATAATCCAAACATGCATGTGCATGCATGGTACCTGGAGTTTGTCTTC
                      ____________________________________________________________
consensus             TGTCCCAAATAATATAATCCAAACATGCATGTGCATGCATGGTACCTGGAGTTTGTCTTC
 
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rJMSF045P01+          GGGATTTCAGTTCTTTGGTAGCTGCCATGCTCTGATTCTCTCATGTTACGTTGTTTGTAT
JMSF045P01-           GGGATTTCAGTTCTTTGGTAGCTGCCATGCTCTGATTCTCTCATGTTACGTTGTTTGTAT
                      ____________________________________________________________
consensus             GGGATTTCAGTTCTTTGGTAGCTGCCATGCTCTGATTCTCTCATGTTACGTTGTTTGTAT
 
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rJMSF045P01+          GTAGTGTGTTTCGATCGTT                                         
JMSF045P01-           GTAGTGTGTTTCGATCGTTTGAAGTTATGCAATTTCTAATCTGTGTTTTCTAAAANAAAA
                      ____________________________________________________________
consensus             GTAGTGTGTTTCGATCGTTTGAAGTTATGCAATTTCTAATCTGTGTTTTCTAAAANAAAA