Contig 006706:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045O14+                                                           TTCTGTATCTGC
                      ____________________________________________________________
consensus                                                             TTCTGTATCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045O14+           CCATTTGACTACTAAAGGGACCGTAGAACCCTCCATCTTATGGTTTCCATTAAGGGCATC
                      ____________________________________________________________
consensus             CCATTTGACTACTAAAGGGACCGTAGAACCCTCCATCTTATGGTTTCCATTAAGGGCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051G15+                               CTTTTTGTTCATATTTTAGAAAAGCGCATCCTCTACTAGT
JMSF045O14+           TATGGCTGCAACAGCTTCTTCTTTTTGTTCATATTTTAGAAAAGCGCATCCTCTACTAGT
                      ____________________________________________________________
consensus             TATGGCTGCAACAGCTTCTTCTTTTTGTTCATATTTTAGAAAAGCGCATCCTCTACTAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051G15+           NTGCTGAGACCCTCTAATAATTTGTAAATCTTTAATGGTTCCATATTGTGAGAATAAGGC
JMSF045O14+           TTGCTGAGACCCTCTAATAATTTGTAAATCTTTAATGGTTCCATATTGTGAGAATAAGGC
                      ____________________________________________________________
consensus             TTGCTGAGACCCTCTAATAATTTGTAAATCTTTAATGGTTCCATATTGTGAGAATAAGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051G15+           CGAGAGNTCAGCTTCAGAAACATTCTTCGGTAGCATACCAACAAAAAGCTTGTGCTCTAG
JMSF045O14+           CGAGAGTTCAGCTTCAGAAACATTCTTCGGTAGCATACCAACAAAAAGCTTGTGCTCTAG
                      ____________________________________________________________
consensus             CGAGAGTTCAGCTTCAGAAACATTCTTCGGTAGCATACCAACAAAAAGCTTGTGCTCTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051G15+           CCTTTCCAACTCGCCATNTGCATACTTTACTTGCAATGGACTAGAAGCCCCGGGAAGCGT
JMSF045O14+           CCTTTCCAACTCGCCATCTGCATACTTTACTTGCAATGGACTAGAAGCCCCGGGAAGCGT
                      ____________________________________________________________
consensus             CCTTTCCAACTCGCCATCTGCATACTTTACTTGCAATGGACTAGAAGCCCCGGGAAGCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051G15+           CTTCTTATTGTGGCACGCATNTATAGCCTTCTCGGCTTCTTCTCTCGACGGGCATATCAC
JMSF045O14+           CTTCTTATTGTGGCACGCATNTATAGCCTTCTCGGCTTCTTCTCTCGACGGGCATATCAC
                      ____________________________________________________________
consensus             CTTCTTATTGTGGCACGCATNTATAGCCTTCTCGGCTTCTTCTCTCGACGGGCATATCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051G15+           GAAACAACACCCTCGAGAAGCTCGCGTCGTCTTGTCTTTGATGATGTTGACTTCATCAAC
JMSF045O14+           GAAACAACACCCTCGAGAAGCTCGCGTCGTCTTGTCTTTGATGATGTTGACTTCATCAAC
                      ____________________________________________________________
consensus             GAAACAACACCCTCGAGAAGCTCGCGTCGTCTTGTCTTTGATGATGTTGACTTCATCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051G15+           GATAG-AAAACTCGGCGAACATTGCGAGGAGNTGCGCTTCCGTCATNTGCTTCGGCACTT
JMSF045O14+           GATAGAAAAACTCGGCGAACATTGCGAGGAGCTGCGCTTCCGTCATCTGCTTCGGCACTT
                      ____________________________________________________________
consensus             GATAGAAAAACTCGGCGAACATTGCGAGGAGCTGCGCTTCCGTCATCTGCTTCGGCACTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF051G15+           GACCGACGAAGAGCTTGACGCTCTCTTCGCCGTGCTTC                      
JMSF045O14+           GACCGACGAAGAGCTTGACGCTCTCTTCGCCGTGCTTCTGCGGCTGCTGCGTTTGCCCCT
                      ____________________________________________________________
consensus             GACCGACGAAGAGCTTGACGCTCTCTTCGCCGTGCTTCTGCGGCTGCTGCGTTTGCCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045O14+           CCGCCATTAATGCCGCCGCGACACGTTAACTCACTCTCTCTCTCTCTCTCTCTCTCTAGA
                      ____________________________________________________________
consensus             CCGCCATTAATGCCGCCGCGACACGTTAACTCACTCTCTCTCTCTCTCTCTCTCTCTAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF045O14+           TTTTGTCACTCTCTTCTTCTCCTGTCGTTGACGGCTGCTTCGTGCCGATCTCGCACCGCC
                      ____________________________________________________________
consensus             TTTTGTCACTCTCTTCTTCTCCTGTCGTTGACGGCTGCTTCGTGCCGATCTCGCACCGCC