| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002H05 | Sequence | 562 | 006704 (6) | ref|XP_009790840.1| | 2e-81 | PREDICTED: uncharacterized protein LOC104238234 isoform X2 [Nicotiana sylvestri | |||||
| JMFF003E08 | Sequence | 130 | 006704 (6) | ||||||||
| JMSF010H19 | Sequence | 397 | 006704 (6) | ref|XP_009790840.1| | 1e-51 | PREDICTED: uncharacterized protein LOC104238234 isoform X2 [Nicotiana sylvestri | 742 | 006704 (6) | ref|XP_003603211.1| | 3e-87 | hypothetical protein MTR_3g105080 [Medicago truncatula] gb|AES73462.1| ferredoxi |
| JMSF045L07 | Sequence | 751 | 006704 (6) | ref|XP_009626175.1| | 1e-99 | PREDICTED: uncharacterized protein LOC104116915 isoform X2 [Nicotiana tomentosi | 722 | 006704 (6) | ref|XP_003603211.1| | 6e-65 | hypothetical protein MTR_3g105080 [Medicago truncatula] gb|AES73462.1| ferredoxi |
This contig is upended
. : . : . : . : . : . :
rJMSF045L07- GCAGTATGCTCATTTACATAACCTGCAGGATTGGTGGCTTATCATTTAAAGGTGCA
____________________________________________________________
consensus GCAGTATGCTCATTTACATAACCTGCAGGATTGGTGGCTTATCATTTAAAGGTGCA
. : . : . : . : . : . :
rJMSF045L07- TATAAGAGATCCAAAATATTTTCAACAAAATCAAATGTGGAAATGGTATTCTTTACAGAG
rJMSF010H19- AATGGTATTCTTTACAGAG
____________________________________________________________
consensus TATAAGAGATCCAAAATATTTTCAACAAAATCAAATGTGGAAATGGTATTCTTTACAGAG
. : . : . : . : . : . :
rJMSF045L07- AACATTGATGAATGAATTGATACAATAATGATACACTAAACACAGTTCCTACGGCATAAC
rJMSF010H19- AACATTGATGAATGAATTGATACAATAATGATACACTAAACACAGTTCCTACGGCATAAC
____________________________________________________________
consensus AACATTGATGAATGAATTGATACAATAATGATACACTAAACACAGTTCCTACGGCATAAC
. : . : . : . : . : . :
rJMSF045L07- AAGAGAGTTGCCCAAGAACAGCCATCCACAATCCATGAAATGGTGGGTTATACTGATCCA
rJMSF010H19- AAGAGAGTTGCCCAAGAACAGCCATCCACAATCCATGAAATGGTGGGTTATACTGATCCA
JMSF045L07+ AATCCATGAAATGGTGGGTTATACTGATCCA
____________________________________________________________
consensus AAGAGAGTTGCCCAAGAACAGCCATCCACAATCCATGAAATGGTGGGTTATACTGATCCA
. : . : . : . : . : . :
rJMSF045L07- AATGCATAAACGAGGGCAACCAAAGCTCCAACGGCAACTAGCCATGGGCGTAAGGTTCGA
rJMSF010H19- AATGCATAAACGAGGGCAACCAAAGCTCCAACGGCAACTAGCCATGGGCGTAAGGTTCGA
JMSF045L07+ AATGCATAAACGAGGGCAACCAAAGCTCCAACGGCAACTAGCCATGGGCGTAAGGTTCGA
____________________________________________________________
consensus AATGCATAAACGAGGGCAACCAAAGCTCCAACGGCAACTAGCCATGGGCGTAAGGTTCGA
. : . : . : . : . : . :
rJMSF045L07- GACAAAGCATTAGCTGCGCTGCACACATCGTTAGCACCGCTGAAGCATCCGGGCTTCGTG
rJMSF010H19- GACAAAGCATTAGCTGCGCTGCACACATCGTTAGCACCGCTGAAGCATCCGGGCTTCGTG
JMSF045L07+ GACAAAGCATTAGCTGCGCTGCACACATCGTTAGCACCGCTGAAGCATCCGGGCTTCGTG
____________________________________________________________
consensus GACAAAGCATTAGCTGCGCTGCACACATCGTTAGCACCGCTGAAGCATCCGGGCTTCGTG
. : . : . : . : . : . :
rJMSF045L07- TCCTTCGCCGTGCCTCCCTCCAAGGCGAAGCTGCTATTCGATTTGCCATTGCTGAAGAGC
rJMSF010H19- TCCTTCGCCGTGCCTCCCTCCAAGGCGAAGCTGCTATTCGATTTGCCATTGCTGAAGAGC
JMFF002H05+ TCGATTTGCCATTGCTGAAGAGC
JMSF045L07+ TCCTTCGCCGTGCCTCCCTCCAAGGCGAAGCTGCTATTCGATTTGCCATTGCTGAAGAGC
____________________________________________________________
consensus TCCTTCGCCGTGCCTCCCTCCAAGGCGAAGCTGCTATTCGATTTGCCATTGCTGAAGAGC
. : . : . : . : . : . :
rJMSF045L07- ACACACCAGAAATACGGGCCACCGCCATCACTGCCACTCACAGCACCGCCAACCTCGGTG
rJMSF010H19- ACACACCAGAAATACGGGCCACCGCCATCACTGCCACTCACAGCACCGCCAACCTCGGTG
JMFF002H05+ ACACACCAGAAATACGGGCCACCGCCATCACTGCCACTCACAGCACCGCCAACCTCGGTG
JMSF045L07+ ACACACCAGAAATACGGGCCACCGCCATCACTGCCACTCACAGCACCGCCAACCTCGGTG
____________________________________________________________
consensus ACACACCAGAAATACGGGCCACCGCCATCACTGCCACTCACAGCACCGCCAACCTCGGTG
. : . : . : . : . : . :
rJMSF045L07- TGGTTCTTGCTGTAGAGTATATCGAAGCTTTTTTGGCCTCTTATCAAGATGTCCGAGAAT
rJMSF010H19- TGGTTCTTGCTGTAGAGTATATCGAAGCTTTTTTGGCCTCTTATCAAGATGTCCGAGAAT
JMFF002H05+ TGGTTCTTGCTGTAGAGTATATCGAAGCTTTTTTGGCCTCTTATCAAGATGTCCGAGAAT
JMSF045L07+ TGGTTCTTGCTGTAGAGTATATCGAAGCTTTTTTGGCCTCTTATCAAGATGTCCGAGAAT
____________________________________________________________
consensus TGGTTCTTGCTGTAGAGTATATCGAAGCTTTTTTGGCCTCTTATCAAGATGTCCGAGAAT
. : . : . : . : . : . :
rJMSF045L07- GCTTGAGAAGGGCTCACGTATTTGGATTGGCAGGCAAGAAAGCGGCCGGTTATTTGAGCA
rJMSF010H19- GCTTGAGAAGGGCTCACGTATTTGGATTGGCAGGCAAGAAAGCGGCCGGTTATTTGAGCA
JMFF002H05+ GCTTGAGAAGGGCTCACGTATTTGGATTGGCAGGCAAGAAAGCGGCCGGTTATTTGAGCA
JMSF010H19+ CGTATTTGGATTGGCAGGCAAGAAAGCGGCCGGTTATTTGAGCA
JMSF045L07+ GCTTGAGAAGGGCTCACGTATTTGGATTGGCAGGCAAGAAAGCGGCCGGTTATTTGAGCA
____________________________________________________________
consensus GCTTGAGAAGGGCTCACGTATTTGGATTGGCAGGCAAGAAAGCGGCCGGTTATTTGAGCA
. : . : . : . : . : . :
rJMSF045L07- AGGGTGTTTACCTGAACACCGCAGTTGGGGGCAAAAGTTTCAACGAATGAAGAATCGGGA
rJMSF010H19- AGGGTGTTTACCTGAACACCGCAGTTGGGGGCAAAAGTTTCAACGAATGAAGAATCGGGA
JMFF002H05+ AGGGTGTTTACCTGAACACCGCAGTTGGGGGCAAAAGTTTCAACGAATGAAGAATCGGGA
JMSF010H19+ AGGGTGTTTACCTGAACACCGCAGTTGGGGGCAAAAGTTTCAACGAATGAAGAATCGGGA
JMSF045L07+ AGGGTGTTTACCTGAACACCGCAGTTGGGGGCAAAAGTTTCAACGAATGAAGAATCGGGA
____________________________________________________________
consensus AGGGTGTTTACCTGAACACCGCAGTTGGGGGCAAAAGTTTCAACGAATGAAGAATCGGGA
. : . : . : . : . : . :
rJMSF045L07- GGCTTCTTGGCATCTGACCCTCCAACGGCATCGCAGTCACCTTCAAAGGCTTTTATGTAT
rJMSF010H19- GGCTTCTTGGCATCTGACCCTCCAACGGCATCGCAGTCACCTTCAAAGGCTTTTATGTAT
JMFF002H05+ GGCTTCTTGGCATCTGACCCTCCAACGGCATCGCAGTCACCTTCAAAGGCTTTTATGTAT
JMSF010H19+ GGCTTCTTGGCATCTGACCCTCCAACGGCATCGCAGTCACCTTCAAAGGCTTTTATGTAT
JMSF045L07+ GGCTTCTTGGCATCTGACCCTCCAACGGCATCGCAGTCACCTTCAAAGGCTTTTATGTAT
____________________________________________________________
consensus GGCTTCTTGGCATCTGACCCTCCAACGGCATCGCAGTCACCTTCAAAGGCTTTTATGTAT
. : . : . : . : . : . :
rJMSF045L07- TGCAGA
rJMSF010H19- TGCAGAGCTAAGCACGCCAGTCCCGGATTGCTGTACAAGGAAGGTAGTTTCTTAGCAGTC
JMFF002H05+ TGCAGAGCTAAGCACGCCAGTCCCGGATTGCTGTACAAGGAAGGTAGTTTCTTAGCAGTC
JMSF010H19+ TGCAGAGCTAAGCACGCCAGTCCCGGATTGCTGTACAAGGAAGGTAGTTTCTTAGCAGTC
JMSF045L07+ TGCAGAGCTAAGCACGCCAGTCCCGGATTGCTGTACAAGGAAGGTAGTTTCTTAGCAGTC
____________________________________________________________
consensus TGCAGAGCTAAGCACGCCAGTCCCGGATTGCTGTACAAGGAAGGTAGTTTCTTAGCAGTC
. : . : . : . : . : . :
rJMSF010H19- CTATTATTGTTGAGTGCCGCTACAAGCTCATCAGCAGGATTGTCTGTGACTTTACTTTGA
JMFF002H05+ CTATTATTGTTGAGTGCCGCTACAAGCTCATCAGCAGGATTGTCTGTGACTTTACTTTGA
JMSF010H19+ CTATTATTGTTGAGTGCCGCTACAAGCTCATCAGCAGGATTGTCTGTGACTTTACTTTGA
JMFF003E08+ CTTTNCTTTGA
JMSF045L07+ CTATTATTGTTGAGTGCCGCTACAAGCTCATCAGCAGGATTGTCTGTGACTTTACTTTGA
____________________________________________________________
consensus CTATTATTGTTGAGTGCCGCTACAAGCTCATCAGCAGGATTGTCTGTGACTTTACTTTGA
. : . : . : . : . : . :
rJMSF010H19- GC
JMFF002H05+ GCATTAGCGGAGGCGGAGGTGAAGAAAATACAGAGAAGAAGAAACCATTGAAGAAACGCC
JMSF010H19+ GCATTAGCGGAGGCGGAGGTGAAGAAAATACAGAGAAGAA-AAACCATTGAAGAAACGCC
JMFF003E08+ GCATTAGCGGAGGCGGAGGTGAAGAAAATNCAGAGAAGAAGAATCCATTGAAGAAACGCC
JMSF045L07+ GCATTAGCGGAGGCGGAGGTGAAGAAAATACAGAGAAGAAGAAACCATTGAAGAAACGCC
____________________________________________________________
consensus GCATTAGCGGAGGCGGAGGTGAAGAAAATACAGAGAAGAAGAAACCATTGAAGAAACGCC
. : . : . : . : . : . :
JMFF002H05+ ATTGTGGGGAGGTTAGAGAGAGACGGGAAATGTGAGGAAGCTGTGGAGCATC
JMSF010H19+ ATTGTGGGGAGGTTAGAGAGAGACGGGAAATGTGAGGAAGCTGTGGAGC
JMFF003E08+ ATTGTGGGGAGGTTAGAGAGAGNCGGGAAATGTGAGGAAGCTGTGGAGC
JMSF045L07+ ATTGTGGGGAGGTTAGAGAGAGACGGGAAATGTGAGGAAGCTGTGGAGCATCGCAGAGCC
____________________________________________________________
consensus ATTGTGGGGAGGTTAGAGAGAGACGGGAAATGTGAGGAAGCTGTGGAGCATCGCAGAGCC