Contig 006703:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003N14Sequence352006703 (2)ref|XP_009801650.1|2e-35PREDICTED: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase [N771012326 (3)emb|CDP07519.1|3e-122unnamed protein product [Coffea canephora]
JMSF045J04Sequence659006703 (2)ref|XP_006367624.1|1e-81PREDICTED: tRNA wybutosine-synthesizing protein 1 homolog [Solanum tuberosum]663012326 (3)emb|CDP07519.1|1e-95unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF045J04+            TCTACATCCCCCTCACAGACCCCCAAAACCTCAGCACCCCCAAGTTTGCGCAATCTTTT
                      ____________________________________________________________
consensus              TCTACATCCCCCTCACAGACCCCCAAAACCTCAGCACCCCCAAGTTTGCGCAATCTTTT
 
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JMSF045J04+           CGAAAAATCTTTAGCAACAGCATTAAACGTCTCACCATAAGACCTACTGCCAACACCAAA
                      ____________________________________________________________
consensus             CGAAAAATCTTTAGCAACAGCATTAAACGTCTCACCATAAGACCTACTGCCAACACCAAA
 
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JMSF045J04+           GATTGCAAATTTACACTTGCTGAGCAACAAAGCTCCAACTCTGAAGTCATCAGAGCTCTC
                      ____________________________________________________________
consensus             GATTGCAAATTTACACTTGCTGAGCAACAAAGCTCCAACTCTGAAGTCATCAGAGCTCTC
 
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JMSF045J04+           GGTTAACCAATTCCCTAAAAACCCACCATTTTTAGGAGGCTTCCCGTCTTCCCAGGTGGA
                      ____________________________________________________________
consensus             GGTTAACCAATTCCCTAAAAACCCACCATTTTTAGGAGGCTTCCCGTCTTCCCAGGTGGA
 
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JMSF003N14+           GGCTACAATGAGAACTACACTTTCTTTATGCAAATCCTCAGGCTCATAATCCCTAGGGTC
JMSF045J04+           GGCTACAATGAGAACTACACTTTCTTTATGCAAATCCTCAGGCTCATAATCCCTAGGGTC
                      ____________________________________________________________
consensus             GGCTACAATGAGAACTACACTTTCTTTATGCAAATCCTCAGGCTCATAATCCCTAGGGTC
 
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JMSF003N14+           AACGAGGTCAAACTGCAGATCCTTGAGGGCCAGGAAGGCGCGCAGGCGATGAGCTAGGGT
JMSF045J04+           AACGAGGTCAAACTGCAGATCCTTGAGGGCCAGGAAGGCGCGCAGGCGATGAGCTAGGGT
                      ____________________________________________________________
consensus             AACGAGGTCAAACTGCAGATCCTTGAGGGCCAGGAAGGCGCGCAGGCGATGAGCTAGGGT
 
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JMSF003N14+           TTTGGAAGTGCCGGTTTCAGAAAGAAAGAATATTTTGCCTCTAGAGTTACGGGTAGGATT
JMSF045J04+           TTTGGAAGTGCCGGTTTCAGAAAGAAAGAATATTTTGCCTCTAGAGTTACGGGTAGGATT
                      ____________________________________________________________
consensus             TTTGGAAGTGCCGGTTTCAGAAAGAAAGAATATTTTGCCTCTAGAGTTACGGGTAGGATT
 
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JMSF003N14+           CTGGGCAGGGAGTAATGTGGAGGCCTTGAGGCGGCGGAGGAGGTGGCGACGCGACTTGTA
JMSF045J04+           CTGGGCAGGGAGTAATGTGGAGGCCTTGAGGCGGCGGAGGAGGTGGCGACGCGACTTGTA
                      ____________________________________________________________
consensus             CTGGGCAGGGAGTAATGTGGAGGCCTTGAGGCGGCGGAGGAGGTGGCGACGCGACTTGTA
 
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JMSF003N14+           GAAGAAGAAGATGGTGGTGGCGGAGAGGAGGCCGAGCACGGCGAGTCGCGTAGAAAGAGA
JMSF045J04+           GAAGAAGAAGATGGTGGTGGCGGAGAGGAGGCCGAGCACGGCGAGTCGCGTAGAAAGAGA
                      ____________________________________________________________
consensus             GAAGAAGAAGATGGTGGTGGCGGAGAGGAGGCCGAGCACGGCGAGTCGCGTAGAAAGAGA
 
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JMSF003N14+           AGTGGCTGAAGGAGACATGGTGAGAATTTAGGTTTTCCCGCGTTTAGCTTC         
JMSF045J04+           AGTGGCTGAAGGAGACATGGTGAGAATTTAGGTTTTCCCGCGTTTAGCTTCGGGGAAAGA
                      ____________________________________________________________
consensus             AGTGGCTGAAGGAGACATGGTGAGAATTTAGGTTTTCCCGCGTTTAGCTTCGGGGAAAGA
 
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JMSF045J04+           GAGCAATCACTGATCAGCGTCAACTTAAATGCTTCATCTTCGAATCCACCCCTGCAACTC
                      ____________________________________________________________
consensus             GAGCAATCACTGATCAGCGTCAACTTAAATGCTTCATCTTCGAATCCACCCCTGCAACTC