Contig 006701:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF045D18+                                                    CGAGTGAACCATTGATCCC
                      ____________________________________________________________
consensus                                                      CGAGTGAACCATTGATCCC
 
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JMSF045D18+           TGTCTGGGATGAGGGTGAAGCCCAACAGGATGCTGTTGATGATGATGAACCCTCATTGAA
                      ____________________________________________________________
consensus             TGTCTGGGATGAGGGTGAAGCCCAACAGGATGCTGTTGATGATGATGAACCCTCATTGAA
 
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JMSF045D18+           CCTTGTAAATCAAGACCCCCATAAGAACTACCAGGAATCATGTTCCCTGATGATATATTT
                      ____________________________________________________________
consensus             CCTTGTAAATCAAGACCCCCATAAGAACTACCAGGAATCATGTTCCCTGATGATATATTT
 
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JMSF045D18+           CCTTCCATTTCTTGCTAACAAACCACCATCCAAATCAACCCTAAAAGGCTAAAACAAGTA
                      ____________________________________________________________
consensus             CCTTCCATTTCTTGCTAACAAACCACCATCCAAATCAACCCTAAAAGGCTAAAACAAGTA
 
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JMSF045D18+           AACAACCACTCCTTTCCCTAATCCCTACTACAATGGTTCAAAATTAAAGCAACTCCCTTT
                      ____________________________________________________________
consensus             AACAACCACTCCTTTCCCTAATCCCTACTACAATGGTTCAAAATTAAAGCAACTCCCTTT
 
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JMSF045D18+           TTTCTCACAAAAAGTGAAATCTTTCTACCTCAGAACCAGAAAGCCAGAAAGGTATTCACT
                      ____________________________________________________________
consensus             TTTCTCACAAAAAGTGAAATCTTTCTACCTCAGAACCAGAAAGCCAGAAAGGTATTCACT
 
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JMSF004C23+                      ATTTTTGACAAAACAGCTCAGAATACAGAAACACCCAAAAAATCATTTC
JMSF045D18+           TCAAAAAGCCCATTTTTGACAAAACAGCTCAGAATACAGAAACACCCAAAAAATCATTTC
                      ____________________________________________________________
consensus             TCAAAAAGCCCATTTTTGACAAAACAGCTCAGAATACAGAAACACCCAAAAAATCATTTC
 
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JMSF004C23+           ATTTTACTCATCAACAGAAAGGCAAATCCATAGTCTATACCAATCATCAACTTAGATACA
JMSF045D18+           ATTTTACTCATCAACAGAAAGGCAAATCCATAGTCTATACCAATCATCAACTTAGATACA
                      ____________________________________________________________
consensus             ATTTTACTCATCAACAGAAAGGCAAATCCATAGTCTATACCAATCATCAACTTAGATACA
 
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JMSF004C23+           AATCACTAGTGAAAGAAAATCCAAACACAAACATTTCCTGACACCATACAAAGAAACCCA
JMSF045D18+           AATCACTAGTGAAAGAAAATCCAAACACAAACATTTCCTGACACCATACAAAGAAACCCA
                      ____________________________________________________________
consensus             AATCACTAGTGAAAGAAAATCCAAACACAAACATTTCCTGACACCATACAAAGAAACCCA
 
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JMSF004C23+           TTAACACCAAC                                                 
JMSF005P12+                    ACACATGATTTAAGAGGCGTCCTAATTATCTGCCGAGATTCCGGGGTTGAA
JMSF045D18+           TTAACACCAACACATGATTTAAGAGGCGTCCTAATTATCTGCCGAGATTCCGGGGTTGAA
                      ____________________________________________________________
consensus             TTAACACCAACACATGATTTAAGAGGCGTCCTAATTATCTGCCGAGATTCCGGGGTTGAA
 
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JMSF005P12+           GAAGGAAGAATACAAGAGGCAATCTGGAGTTTATACC                       
JMSF045D18+           GAAGGAAGAATACAAGAGGCAATCTGGAGTTTATACCCGTAAAAAGACAAATTTTCAGGC
                      ____________________________________________________________
consensus             GAAGGAAGAATACAAGAGGCAATCTGGAGTTTATACCCGTAAAAAGACAAATTTTCAGGC
 
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JMSF045D18+           TGTATACTGTTAACCGTAGAGGGTAAAAGGGCTTAGGTGGTTGCAGTTTCAATGTGTGGG
                      ____________________________________________________________
consensus             TGTATACTGTTAACCGTAGAGGGTAAAAGGGCTTAGGTGGTTGCAGTTTCAATGTGTGGG
 
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JMSF045D18+           GCCGGGCCGGGAGGTATTCAGAATTTTTTCGTGTTCTCAAATCTCAACAAAGCATATTTC
                      ____________________________________________________________
consensus             GCCGGGCCGGGAGGTATTCAGAATTTTTTCGTGTTCTCAAATCTCAACAAAGCATATTTC