Contig 006695:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF043A16Sequence785006695 (3)emb|CAN68478.1|1e-107hypothetical protein VITISV_029628 [Vitis vinifera]638012731 (5)gb|EYU43608.1|3e-66hypothetical protein MIMGU_mgv1a001835mg [Erythranthe guttata]
JMSF044L05Sequence659006695 (3)ref|XP_010094986.1|2e-81hypothetical protein L484_006858 [Morus notabilis] gb|EXB57745.1| hypothetical p805012731 (5)ref|XP_009781050.1|1e-139PREDICTED: exocyst complex component SEC6 isoform X1 [Nicotiana sylvestris] ref
JMSF053O13Sequence629006695 (3)ref|XP_010094986.1|6e-80hypothetical protein L484_006858 [Morus notabilis] gb|EXB57745.1| hypothetical p842012731 (5)emb|CDP01157.1|9e-127unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF043A16+                                              CTCCTTAGCAAGTTTGAAGAAGTTG
                      ____________________________________________________________
consensus                                                CTCCTTAGCAAGTTTGAAGAAGTTG
 
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JMSF043A16+           GAAATATGGCCCCCATAGTGAGTTTTCAAAAGTTTCCCATGTGCGATCTACATCTTCAAA
                      ____________________________________________________________
consensus             GAAATATGGCCCCCATAGTGAGTTTTCAAAAGTTTCCCATGTGCGATCTACATCTTCAAA
 
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JMSF043A16+           ATACTCTCTTAGTCTGCCAACCTCTTCCTCATGAGATGCTGCAGCAGCTAGTGCAAACCT
                      ____________________________________________________________
consensus             ATACTCTCTTAGTCTGCCAACCTCTTCCTCATGAGATGCTGCAGCAGCTAGTGCAAACCT
 
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JMSF053O13+                  CCATCAAGAGCTGTTAACCTCTCATAGGTGCTAATGAGTTCTTTGTCATCACC
JMSF043A16+           CCGTTTTCCATCAAGAGCTGTTAACCTCTCATAGGTGCTAATGAGTTCTTTGTCATCACC
JMSF044L05+                  CCATCAAGAGCTGTTAACCTTTCATAGGTGNTAATGAGTTCTTTGTCATCACC
                      ____________________________________________________________
consensus             CCGTTTTCCATCAAGAGCTGTTAACCTCTCATAGGTGCTAATGAGTTCTTTGTCATCACC
 
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JMSF053O13+           AAGGGACTCCTGTGCATCAGCAGCCTCAACAGAAATTGACATCATTCCCTCCACATCCTT
JMSF043A16+           AAGGGACTCCTGTGCATCAGCAGCCTCAACAGAAATTGACATCATTCCCTCCACATCCTT
JMSF044L05+           AAGGGACTCCTGTGCATCAGCAGCCTCAACAGAAATTGACATCATTCCCTCCACATCCTT
                      ____________________________________________________________
consensus             AAGGGACTCCTGTGCATCAGCAGCCTCAACAGAAATTGACATCATTCCCTCCACATCCTT
 
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JMSF053O13+           CAGGGTAGTGTTCAGGTTATTCCTTGCATTACTAAGAAGCTTTATCTGATCGTGATTGTC
JMSF043A16+           CAGGGTAGTGTTCAGGTTATTCCTTGCATTACTAAGAAGCTTTATCTGATCGTGATTGTC
JMSF044L05+           CAGGGTAGTGTTCAGGTTATTCCTTGCATTACTAAGAAGCTTTATCTGATCGTGATTGTC
                      ____________________________________________________________
consensus             CAGGGTAGTGTTCAGGTTATTCCTTGCATTACTAAGAAGCTTTATCTGATCGTGATTGTC
 
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JMSF053O13+           TATTAATGTTTGGCATTCTTGACATAACTTTTCAATTGAAAGGAAGTTCTCTCGGAGTTG
JMSF043A16+           TATTAATGTTTGGCATTCTTGACATAACTTTTCAATTGAAAGGAAGTTCTCTCGGAGTTG
JMSF044L05+           TATTAATGTTTGGCATTCTTGACATAACTTTTCAATTGAAAGGAAGTTCTCTCGGAGTTG
                      ____________________________________________________________
consensus             TATTAATGTTTGGCATTCTTGACATAACTTTTCAATTGAAAGGAAGTTCTCTCGGAGTTG
 
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JMSF053O13+           GCTGATAGTCTTCTGAGATAAGGAAAGTGATTCAAGACCAGCTTGTGCTTGTTCAACCTG
JMSF043A16+           GCTGATAGTCTTCTGAGATAAGGAAAGTGATTCAAGACCAGCTTGTGCTTGTTCAACCTG
JMSF044L05+           GCTGATAGTCTTCTGAGATAAGGAAAGTGATTCAAGACCAGCTTGTGCTTGTTCAACCTG
                      ____________________________________________________________
consensus             GCTGATAGTCTTCTGAGATAAGGAAAGTGATTCAAGACCAGCTTGTGCTTGTTCAACCTG
 
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JMSF053O13+           TTCGGCTACCATTGTACTAAGTTGTGCATCATTTGCCTGCTGGCGAGCAATGTAATCAGC
JMSF043A16+           TTCGGCTACCATTGTACTAAGTTGTGCATCATTTGCCTGCTGGCGAGCAATGTAATCAGC
JMSF044L05+           TTCGGCTACCATTGTACTAAGTTGTGCATCATTTGCCTGCTGGCGAGCAATGTAATCAGC
                      ____________________________________________________________
consensus             TTCGGCTACCATTGTACTAAGTTGTGCATCATTTGCCTGCTGGCGAGCAATGTAATCAGC
 
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JMSF053O13+           TTTGATCGAAGCAATCGACTGCAAGAGCTCCGGCAGCGGCAGGAGCTTGGCGACCTCACG
JMSF043A16+           TTTGATCGAAGCAATCGACTGCAAGAGCTCCGGCAGCGGCAGGAGCTTGGCGACCTCACG
JMSF044L05+           TTTGATCGAAGCAATCGACTGCAAGAGCTCCGGCAGCGGCAGGAGCTTGGCGACCTCACG
                      ____________________________________________________________
consensus             TTTGATCGAAGCAATCGACTGCAAGAGCTCCGGCAGCGGCAGGAGCTTGGCGACCTCACG
 
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JMSF053O13+           GACCGCGGCCTCCTTGGCCTCCACACCAAGATCTTCCGCCATCATCTTCAACTTACATAC
JMSF043A16+           GACCGCGGCCTCCTTGGCCTCCACACCAAGATCTTCCGCCATCATCTTCAACTTACATAC
JMSF044L05+           GACCGCGGCCTCCTTGGCCTCCACACCAAGATCTTCCGCCATCATCTTCAACTTACATAC
                      ____________________________________________________________
consensus             GACCGCGGCCTCCTTGGCCTCCACACCAAGATCTTCCGCCATCATCTTCAACTTACATAC
 
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JMSF053O13+           ACAGAAGGTGAGAGCTACGAAAAGGCAGCAGATTCTGTAGGTGAAGATTTTCGAAAACTT
JMSF043A16+           ACAGAAGGTGAGAGCTACGAAAAGGCAGCAGATTCTGTAGGTGAAGATTTTCGAAAACTT
JMSF044L05+           ACAGAAGGTGAGAGCTACGAAAAGGCAGCAGATTCTGTAGGTGAAGATTTTCGAAAACTT
                      ____________________________________________________________
consensus             ACAGAAGGTGAGAGCTACGAAAAGGCAGCAGATTCTGTAGGTGAAGATTTTCGAAAACTT
 
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JMSF053O13+           CAATGCTAAATTTACAGTTAAAGCGTTTGAAGAACGGTTATTTTTCTGAACCGGCGATTC
JMSF043A16+           CAATGCTAAATTTACAGTTAAAGCGTTTGAAGAACGGTTATTTTTCTGAACCGGCGATTC
JMSF044L05+           CAATGCTAAATTTACAGTTAAAGCGTTTGAAGAACGGTTATTTTTCTGAACCGGCGATTC
                      ____________________________________________________________
consensus             CAATGCTAAATTTACAGTTAAAGCGTTTGAAGAACGGTTATTTTTCTGAACCGGCGATTC
 
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JMSF053O13+           AGACACTACCAGCGAGCAATTCGCAGCTCGATCT                          
JMSF043A16+           AGACACTACCAGCGAGCAATTCGCAGCTCGATCT                          
JMSF044L05+           AGACACTACCAGCGAGCAATTCGCAGCTCGATCTCAGTCCACGGAGATGAAGAAAGGACC
                      ____________________________________________________________
consensus             AGACACTACCAGCGAGCAATTCGCAGCTCGATCTCAGTCCACGGAGATGAAGAAAGGACC