Contig 006690:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027M22Sequence525006690 (7)ref|XP_006351510.1|201PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum]578002603 (7)ref|XP_002511170.1|7e-15conserved hypothetical protein [Ricinus communis] gb|EEF51772.1| conserved hypot
JMFF031C23Sequence591006690 (7)ref|XP_006351510.1|246PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum]573002603 (7)ref|XP_010086962.1|4e-12hypothetical protein L484_010108 [Morus notabilis] gb|EXB25241.1| hypothetical p
JMSF012E19Sequence234006690 (7)756002603 (7)ref|XP_006351510.1|218PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum]
JMSF025A11Sequence650006690 (7)ref|XP_006351510.1|265PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum]758002603 (7)ref|XP_006351510.1|219PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum]
JMSF039I04Sequence727006690 (7)ref|XP_006351510.1|320PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum]871002603 (7)ref|XP_006351510.1|288PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum]
JMSF040D14Sequence671006690 (7)ref|XP_006351510.1|352PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum]867002603 (7)ref|XP_006351510.1|261PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum]
JMSF044G11Sequence811006690 (7)ref|XP_006351510.1|340PREDICTED: uncharacterized protein LOC102597647 [Solanum tuberosum]843002603 (7)ref|XP_009623438.1|2e-81PREDICTED: probable transporter mch1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF040D14+                     CCACAGGTCTCACTAAGAACATCACAGCAGTGATCACAATCGATGGCCCA
JMSF039I04+                                                                   CCCA
JMSF044G11+                                        CATCACAGCAGTGATCACAATCGATGGCCCA
                      ____________________________________________________________
consensus                       CCACAGGTCTCACTAAGAACATCACAGCAGTGATCACAATCGATGGCCCA
 
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JMSF040D14+           ACAGCAACCATGAAGACCAGTGATGATTGATCAGGGAAGTTGATCATGGTATAAAGTTGT
JMSF039I04+           NCAGCAACCATGAAGACCAGTGATGATTGATCAGGGAAGTTGATCATGGTATAAAGTTGT
JMSF044G11+           ACAGCAACCATGAAGACCAGTGATGATTGATCAGGGAAGTTGATCATGGTATAAAGTTGT
                      ____________________________________________________________
consensus             ACAGCAACCATGAAGACCAGTGATGATTGATCAGGGAAGTTGATCATGGTATAAAGTTGT
 
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JMSF040D14+           GTCAAAATTGCACCACTTAACCCTGCAAATCCTTTCAGTATTCCAACTATTGGACCACGG
JMSF039I04+           GTCAAAATTGCACCACTTAACCCTGCAAATCCTTTCAGTATTCCAACTATTGGACCACGG
JMSF025A11+                                              CAGTATTCCAACTATTGGACCACGG
JMSF044G11+           GTCAAAATTGCACCACTTAACCCTGCAAATCCTTTCAGTATTCCAACTATTGGACCACGG
                      ____________________________________________________________
consensus             GTCAAAATTGCACCACTTAACCCTGCAAATCCTTTCAGTATTCCAACTATTGGACCACGG
 
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JMSF040D14+           CTTTTGGGGAAATTTTGAACACTGGAAACTAGAGCCCCAGTATTGAAGTATGTCTCGCCA
JMSF039I04+           CTTTTGGGGAAATTTTGAACACTGGAAACTAGAGCCCCAGTATTGAAGTATGTCTCGCCA
JMSF025A11+           CTTTTGGGGAAATTTTGAACACTGGAAACTAGAGCCCCAGTATTGAAGTATGTCTCGCCA
JMFF031C23+              TTGGGGAAATTTTGAACACTGGAAACTAGAGCCCCAGTATTGAAGTATGTCTCGCCA
JMSF044G11+           CTTTTGGGGAAATTTTGAACACTGGAAACTAGAGCCCCAGTATTGAAGTATGTCTCGCCA
                      ____________________________________________________________
consensus             CTTTTGGGGAAATTTTGAACACTGGAAACTAGAGCCCCAGTATTGAAGTATGTCTCGCCA
 
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JMSF040D14+           TTTGTTCCCACAAATATCAAAACGCAAAGCAGCCAAAGAGGGAGCTCAGGAATCTTGTGG
JMSF039I04+           TTTGTTCCCACAAATATCAAAAAGCAAAGCAGCCAAAGAGGGAGCTCAGGAATCTTGTGG
JMSF025A11+           TTTGTTCCCACAAATATCAAAACGCAAAGCAGCCAAAGAGGGAGCTCAGGAATCTTGTGG
JMFF031C23+           TTTGTTCCCACAAATATCAAAACGCAAAGCAGCCAAAGAGGGAGCTCAGGAATCTTGTGG
JMFF027M22+                    ACAAATATCAAAACGCAAAGCAGCCAAAGAGGGAGCTCAGGAATCTTGTGG
JMSF044G11+           TTTGTTCCCACAAATATCAAAACGCAAAGCAGCCAAAGAGGGAGCTCAGGAATCTTGTGG
                      ____________________________________________________________
consensus             TTTGTTCCCACAAATATCAAAACGCAAAGCAGCCAAAGAGGGAGCTCAGGAATCTTGTGG
 
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JMSF040D14+           GCGACGATAAGCCAGACGAGGCCATAGCCGAAGAAGTTCTGCAAAACGCCAATGAAGAGG
JMSF039I04+           GCGACGATAAGCCAGACGAGGCCATAGCCGAAGAAGTTCTGCAAAACGCCAATGAAGAGG
JMSF025A11+           GCGACGATAAGCCAGACGAGGCCATAGCCGAAGAAGTTCTGCAAAACGCCAATGAAGAGG
JMFF031C23+           GCGACGATAAGCCAGACGAGGCCATAGCCGAAGAAGTTCTGCAAAACGCCAATGAAGAGG
JMFF027M22+           GCGACGATAAGCCAGACGAGGCCATAGCCGAAGAAGTTCTGCAAAACGCCAATGAAGAGG
JMSF044G11+           GCGACGATAAGCCAGACGAGGCCATAGCCGAAGAAGTTCTGCAAAACGCCAATGAAGAGG
                      ____________________________________________________________
consensus             GCGACGATAAGCCAGACGAGGCCATAGCCGAAGAAGTTCTGCAAAACGCCAATGAAGAGG
 
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JMSF040D14+           ACGACCCAGATGGGCATAATCTCGCAGAGGACCCCGGGAAGGAAGCCAATAGCATCCCCC
JMSF039I04+           ACGACCCAGATGGGCATAATCTCGCAGAGGACCCCGGGAAGGAAGCCAATAGCATCCCCC
JMSF025A11+           ACGACCCAGATGGGCATAATCTCGCAGAGGACCCCGGGAAGGAAGCCAATAGCATCCCCC
JMFF031C23+           ACGACCCAGATGGGCATAATCTCGCAGAGGACCCCGGGAAGGAAGCCAATAGCATCCCCC
JMFF027M22+           ACGACCCAGATGGGCATAATCTCGCAGAGGACCCCGGGAAGGAAGCCAATAGCATCCCCC
JMSF044G11+           ACGACCCAGATGGGCATAATCTCGCAGAGGACCCCGGGAAGGAAGCCAATAGCATCCCCC
                      ____________________________________________________________
consensus             ACGACCCAGATGGGCATAATCTCGCAGAGGACCCCGGGAAGGAAGCCAATAGCATCCCCC
 
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JMSF040D14+           AAGTCCTTAGCGACGCCGAGCATGGCAACCTGCCTCTGATTGTAGCCCATGGCGGTCTTG
JMSF039I04+           AAGTCCTTAGCGACGCCGAGCATGGCAACCTGCCTCTGATTGTAGCCCATGGCGGTCTTG
JMSF025A11+           AAGTCCTTAGCGACGCCGAGCATGGCAACCTGCCTCTGATTGTAGCCCATGGCGGTCTTG
JMFF031C23+           AAGTCCTTAGCGACGCCGAGCATGGCAACCTGCCTCTGATTGTAGCCCATGGCGGTCTTG
JMFF027M22+           AAGTCCTTAGCGACGCCGAGCATGGCAACCTGCNTCTGATTGTAGCCCATGGCGGTCTTG
JMSF044G11+           AAGTCCTTAGCGACGCCGAGCATGGCAACCTGCCTCTGATTGTAGCCCATGGCGGTCTTG
                      ____________________________________________________________
consensus             AAGTCCTTAGCGACGCCGAGCATGGCAACCTGCCTCTGATTGTAGCCCATGGCGGTCTTG
 
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JMSF040D14+           ATCACCGGAGAGATGCTGCCGAACAAGTAGCCGATGCCGGAGCAAGACTGTACCCACATT
JMSF039I04+           ATCACCGGAGAGATGCTGCCGAACAAGTAGCCGATGCCGGAGCAAGACTGTACCCACATT
JMSF025A11+           ATCACCGGAGAGATGCTGCCGAACAAGTAGCCGATGCCGGAGCAAGACTGTACCCACATT
JMFF031C23+           ATCACCGGAGAGATGCTGCCGAACAAGTAGCCGATGCCGGAGCAAGACTGTACCCACATT
JMFF027M22+           ATCACCGGAGAGATGCTGCCGAACAAGTAGCCGATGCCGGAGCAAGACTGTACCCACATT
JMSF044G11+           ATCACCGGAGAGATGCTGCCGAACAAGTAGCCGATGCCGGAGCAAGACTGTACCCACATT
                      ____________________________________________________________
consensus             ATCACCGGAGAGATGCTGCCGAACAAGTAGCCGATGCCGGAGCAAGACTGTACCCACATT
 
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JMSF040D14+           GAAGCCACGAAAACCAGCCATCTATCATTGAAGAAAGCCTTCACTCTCTCCCCCACCACC
JMSF039I04+           GAAGCCACGAAAACCAGCCATCTATCATTGAAGAAAGCCTTCACTCTCTCCCCCACCACC
JMSF025A11+           GAAGCCACGAAAACCAGCCATCTATCATTGAAGAAAGCCTTCACTCTCTCCCCCACCACC
JMFF031C23+           GAAGCCACGAAAACCAGCCATCTATCATTGAAGAAAGCCTTCACTCTCTCCCCCACCACC
JMFF027M22+           GAAGCCACGAAAACCAGCCATCTATCATTGAAGAAAGCCTTCACTCTCTCCCCCACCACC
JMSF012E19+                                                              CCCACCACC
JMSF044G11+           GAAGCCACGAAAACCAGCCATCTATCATTGAAGAAAGCCTTCACTCTCTCCCCCACCACC
                      ____________________________________________________________
consensus             GAAGCCACGAAAACCAGCCATCTATCATTGAAGAAAGCCTTCACTCTCTCCCCCACCACC
 
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JMSF040D14+           ATGACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTACATACAAATGGAAAGG
JMSF039I04+           ATGACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTACATACAAATGGAAAGG
JMSF025A11+           ATGACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTACATACAAATGGAAAGG
JMFF031C23+           ATGACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTACATACAAATGGAAAGG
JMFF027M22+           ATGACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTACATACAAATGGAAAGG
JMSF012E19+           ANGACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTACATACAAATGGAAAGG
JMSF044G11+           ATGACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTACATACAAATGGAAAGG
                      ____________________________________________________________
consensus             ATGACCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTCTACATACAAATGGAAAGG
 
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JMSF040D14+           AGACAAGTAGGAAGAAGAAC                                        
JMSF039I04+           AGACAAGTAGGAAGAAGAACAGTTGCAGAGAGGATAAGAATCACAATATATAGAAAGAGC
JMSF025A11+           AGACAAGTAGGAAGAAGAACAGTTGCAGAGAGGATAAGAATCACAATATATAGAAAGAGC
JMFF031C23+           AGACAAGTAGGAAGAAGAACAGTTGCAGAGAGGATAAGAATCACAATATATAGAAAGAGC
JMFF027M22+           AGACAAGTAGGAAGAAGAACAGTTGCAGAGAGGATAAGAATCACAATATATAGAAAGAGC
JMSF012E19+           AGACAAGTAGGAAGAAGAACAGTTGCAGAGAGGATAAGAATCACAATATATAGAAAGAGC
JMSF044G11+           AGACAAGTAGGAAGAAGAACAGTTGCAGAGAGGATAAGAATCACAATATATAGAAAGAGC
                      ____________________________________________________________
consensus             AGACAAGTAGGAAGAAGAACAGTTGCAGAGAGGATAAGAATCACAATATATAGAAAGAGC
 
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JMSF039I04+           TGAAGAGCTAGAAAGTGGTAGTTGAGAAGGAGGGAGGGAAGGTGTTTGGTGGATGGATAT
JMSF025A11+           TGAAGAGCTAGAAAGTGGTAGTTGAGAAGGAGGGAGGGAAGGTGTTTGGTGGATGGATAT
JMFF031C23+           TGAAGAGCTAGAAAGTGGTAGTTGAGAAGGAGGGAGGGAAGGTGTTTGGTGGA       
JMFF027M22+           TGAAGAGCTAGAAAGTGGTAGTTGAGAAGGAGGGAGGGAAGGTGTTTGGTGGA       
JMSF012E19+           TGAAGAGCTAGAAAGTGGTAGTTGAGAAGGAGGGAGGGAAGGTGTTTGGTGGATGGATAT
JMSF044G11+           TGAAGAGCTAGAAAGTGGTAGTTGAGAAGGAGGGAGGGAAGGTGTTTGGTGGATGGATAT
                      ____________________________________________________________
consensus             TGAAGAGCTAGAAAGTGGTAGTTGAGAAGGAGGGAGGGAAGGTGTTTGGTGGATGGATAT
 
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JMSF039I04+           CC                                                          
JMSF025A11+           CCACAGATCAGACGTTTCTCTA                                      
JMSF012E19+           CCACAGATCAGACGTTTCTCTACTCTGAAAATGAATCAAAAA                  
JMSF044G11+           CCACAGATCAGACGTTTCTCTACTCTGAAAATGAATCAAAAATCGCCACCAACTTCGTTC
                      ____________________________________________________________
consensus             CCACAGATCAGACGTTTCTCTACTCTGAAAATGAATCAAAAATCGCCACCAACTTCGTTC