Contig 006680:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF041I04+                                                                      T
                      ____________________________________________________________
consensus                                                                        T
 
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JMSF041I04+           GAAGAGCCTTGTCAAAATCCTCTATAAACCCTTCAAACACAATCACGAAAACAGATCGGA
JMSF043J19+                 CCTTGTCAAAATCCTCTATNAACCCTTCAAACACANTCACGAAAACAGATCGGA
                      ____________________________________________________________
consensus             GAAGAGCCTTGTCAAAATCCTCTATAAACCCTTCAAACACAATCACGAAAACAGATCGGA
 
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JMSF041I04+           TTATCAGAGTAACCGATCTTTTGGAGAATGAACCTTGGAAAAATCCTCTATAAACCCCTC
JMSF043J19+           TTATCAGAGTAACCGATCTTTTGGAGAATGAACCTTGGAAAAATCCTCTATAAACCCCTC
                      ____________________________________________________________
consensus             TTATCAGAGTAACCGATCTTTTGGAGAATGAACCTTGGAAAAATCCTCTATAAACCCCTC
 
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JMFS151C08+                           TCGACCTGATTATCAGCAGAATATATC-TTCGAAGAATGAACC-
JMSF041I04+           AATCACAACCACAAAATCGACCTGATTATCAGCAGAATATATCTTTCGAAGAATGAACCT
JMSF043J19+           AATCACAACCACAAAATCGACCTGATTATCAGCAGAATATATCTTTCGAAGAATGAACCT
                      ____________________________________________________________
consensus             AATCACAACCACAAAATCGACCTGATTATCAGCAGAATATATCTTTCGAAGAATGAACCT
 
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JMFS151C08+           TGTCAAAATCCCCAATAAACTCCTTAACCACGAATCACAAAGAAGACCTTATTATCAAGG
JMSF041I04+           TGTCAAAATCCCCAATAAACTCCTTAACCACGAATCACAAAGAAGACCTTATTATCAAGG
JMSF043J19+           TGTCAAAATCCCCAATAAACTCCTTAACCACGAATCACAAAGAAGACCTTATTATCAAGG
                      ____________________________________________________________
consensus             TGTCAAAATCCCCAATAAACTCCTTAACCACGAATCACAAAGAAGACCTTATTATCAAGG
 
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JMFS151C08+           GAATGATCCTTTGAAGAATAAATCCAGCAATCACAAAATCAACCCGATTAACGATCAAAA
JMSF041I04+           GAATGATCCTTTGAAGAATAAATCCAGCAATCACAAAATCAACCCGATTAACGATCAAAA
JMSF043J19+           GAATGATCCTTTGAAGAATAAATCCAGCAATCACAAAATCAACCCGATTAACGATCAAAA
                      ____________________________________________________________
consensus             GAATGATCCTTTGAAGAATAAATCCAGCAATCACAAAATCAACCCGATTAACGATCAAAA
 
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JMFS151C08+           GCGAAGACCGACCATATTTTCCGAGAAAAAAAGAAGCAGCTAAACCGTCCTACCGTAGCA
JMSF041I04+           GCGAAGACCGACCATATTTTCCGAGAAAAAAAGAAGCAGCTAAACCGTCCTACCGTAGCA
JMSF043J19+           GCGAAGACCGACCATATTTTCCGAGAAAAAAAGAAGCAGCTAAACCGTCCTACCGTAGCA
                      ____________________________________________________________
consensus             GCGAAGACCGACCATATTTTCCGAGAAAAAAAGAAGCAGCTAAACCGTCCTACCGTAGCA
 
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JMFS151C08+           TCTAGAAGGGACAAGGACAACGTAAAGGAGGAAGAGAAAGATAACCAAGGAGAAAGCAAA
JMSF041I04+           TCTAGAAGGGACAAGGACAACGTAAAGGAGGAAGAGAAAGATAACCAAGGAGAAAGCAAA
JMSF043J19+           TCTAGAAGGGACAAGGACAACGTAAAGGAGGAAGAGAAAGATAACCAAGGAGAAAGCAAA
                      ____________________________________________________________
consensus             TCTAGAAGGGACAAGGACAACGTAAAGGAGGAAGAGAAAGATAACCAAGGAGAAAGCAAA
 
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JMFS151C08+           TGTTAACTAATACTACTACACCGAGGTTTCAGACGATGAAAACACAAGACGCCATAGAAG
JMSF041I04+           TGTTAACTAATACTACTACACCGAGGTTTCAGACGATGAAAACACAAGACGCCATAGAAG
JMSF043J19+           TGTTAACTAATACTACTACACCGAGGTTTCAGACGATGAAAACACAAGACGCCATAGAAG
                      ____________________________________________________________
consensus             TGTTAACTAATACTACTACACCGAGGTTTCAGACGATGAAAACACAAGACGCCATAGAAG
 
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JMFS151C08+           CAGGTAGCATACGGACTGATGACGAGCAGATCGAGCAAGAAAGAAGGCACCGACATCGTT
JMSF041I04+           CAGGTAGCATACGGACTGATGACGAGCAGATCGAGCAAGAAAGAAGGCACCGACATCGTT
JMSF043J19+           CAGGTAGCATACGGACTGATGACGAGCAGATCGAGCAAGAAAGAAGGCACCGACATCGTT
                      ____________________________________________________________
consensus             CAGGTAGCATACGGACTGATGACGAGCAGATCGAGCAAGAAAGAAGGCACCGACATCGTT
 
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JMFS151C08+           TGATTCGATGCTCTTCGATTTGATACTGTTTTCCCCTAAACCCTAAAAATCAAAAGCTTA
JMSF041I04+           TGATTCGATGCTCTTCGATTTGATACTGTTTTCCCCTAAACCCTAAAAATCAAAAGCTTA
JMSF043J19+           TGATTCGATGCTCTTCGATTTGATACTGTTTTCCCCTAAACCCTAAAAATCAAAAGCTTA
                      ____________________________________________________________
consensus             TGATTCGATGCTCTTCGATTTGATACTGTTTTCCCCTAAACCCTAAAAATCAAAAGCTTA
 
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JMFS151C08+           CCACTCTCAAACCGATCGGCGAAGATGTAAATCCGGATGTGAAGAAATGGATTGTTGAAT
JMSF041I04+           CCACTCTCAAACCGATCGGCGAAGATGTAAATCCGGATGTGAAGAAATGGATTGTTGAAT
JMSF043J19+           CCACTCTCAAACCGATCGGCGAAGATGTAAATCCGGATGTGAAGAAATGGATTGTTGAAT
                      ____________________________________________________________
consensus             CCACTCTCAAACCGATCGGCGAAGATGTAAATCCGGATGTGAAGAAATGGATTGTTGAAT
 
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JMFS151C08+           TTCGTGAAACTGAGGAATAAATACTGATTGAAACAGAGATCGCGATTACATCGGCGTGGA
JMSF041I04+           TTCGTGAAACTGAGGAATAAATACTGATTGAAACAGAGATCGCGATTACATCGGCGTGGA
JMSF043J19+           TTCGTGAAACTGAGGAATAAATACTGATTGAAACAGAGATCGCGATTACATCGGCGTGGA
                      ____________________________________________________________
consensus             TTCGTGAAACTGAGGAATAAATACTGATTGAAACAGAGATCGCGATTACATCGGCGTGGA
 
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JMFS151C08+           AATGGAACGAATCATGAGACTTGAAGACGAAGAAA                         
JMSF041I04+           AATGGAACGAATCATGAGACTTGAAGACGAAGAAATTGGATCGAGCAGAAATGC      
JMSF043J19+           AATGGAACGAATCATGAGACTTGAAGACGAAGAAATTGGATCGAGCAGAAATGCATTTCC
                      ____________________________________________________________
consensus             AATGGAACGAATCATGAGACTTGAAGACGAAGAAATTGGATCGAGCAGAAATGCATTTCC