Contig 006678:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF043G03+                     GAGTTCAAGAAAGGATGCTGTTGCAACACTCCTTGATAAATCAATATCAG
                      ____________________________________________________________
consensus                       GAGTTCAAGAAAGGATGCTGTTGCAACACTCCTTGATAAATCAATATCAG
 
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JMSF043G03+           ATAGTAATTTTGCCATCCATTCCTCCAAAGAAGAACGTCTCTCTTCCAGTAAGACCTTGG
                      ____________________________________________________________
consensus             ATAGTAATTTTGCCATCCATTCCTCCAAAGAAGAACGTCTCTCTTCCAGTAAGACCTTGG
 
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JMSF043G03+           TTTTCAACCGTGAGAATCCCTTTGGTGGGGCTGGTGGGAGATTTTTCTTGGGGAATATTT
                      ____________________________________________________________
consensus             TTTTCAACCGTGAGAATCCCTTTGGTGGGGCTGGTGGGAGATTTTTCTTGGGGAATATTT
 
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JMSF043G03+           TTTTTAGCGCAGCATGAAATTTCAAGAAATCATTAAATCTTCTAAGTACAATTCGTGTAC
                      ____________________________________________________________
consensus             TTTTTAGCGCAGCATGAAATTTCAAGAAATCATTAAATCTTCTAAGTACAATTCGTGTAC
 
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JMFS027F01+                                                         CACTACAGGATCTG
JMFS108A07+                                                         CACTACAGGATCTG
JMSF043G03+           TTGTGATCCCATCTGGCGACTGTATGCCAACCACAACCCTGTAGAACACTACAGGATCTG
                      ____________________________________________________________
consensus             TTGTGATCCCATCTGGCGACTGTATGCCAACCACAACCCTGTAGAACACTACAGGATCTG
 
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JMFS027F01+           AATCTCTTGATTTTGCAAGGACAACCCAGGAAGGAATTGTGACACAATAACTCCACCCTG
JMFS108A07+           AATCTCTTGATTTTGCAAGGACAACCCAGGAAGGAATTGTGACACAATAACTCCACCCTG
JMSF043G03+           AATCTCTTGATTTTGCAAGGACAACCCAGGAAGGAATTGTGACACAATAACTCCACCCTG
                      ____________________________________________________________
consensus             AATCTCTTGATTTTGCAAGGACAACCCAGGAAGGAATTGTGACACAATAACTCCACCCTG
 
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JMFS027F01+           TGTGAGGATCATGAGGCCATATAGTTTCCTGTCCTGCCCATTTTTTGGGGGGCGGACTCC
JMFS108A07+           TGTGAGGATCATGAGGCCATATAGTTTCCTGTCCTGCCCATTTTTTGGGGGGCGGACTCC
JMSF043G03+           TGTGAGGATCATGAGGCCATATAGTTTCCTGTCCTGCCCATTTTTTGGGGGGCGGACTCC
                      ____________________________________________________________
consensus             TGTGAGGATCATGAGGCCATATAGTTTCCTGTCCTGCCCATTTTTTGGGGGGCGGACTCC
 
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JMFS027F01+           AATCCATTCCCAATGGCAAAGGCGAAGTCCCATCGTGCCTATGCTTCGGCGGACTTTGCC
JMFS108A07+           AATCCATTCCCAATGGCAAAGGCGAAGTCCCATCGTGCCTATGCTTCGGCGGACTTTGCC
JMSF043G03+           AATCCATTCCCAATGGCAAAGGCGAAGTCCCATCGTGCCTATGCTTCGGCGGACTTTGCC
                      ____________________________________________________________
consensus             AATCCATTCCCAATGGCAAAGGCGAAGTCCCATCGTGCCTATGCTTCGGCGGACTTTGCC
 
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JMFS027F01+           TCTGCATCCCTATTCCGACTACAACAGTACTATGAATCAGTTCACCTCTCCTCCTGTATG
JMFS108A07+           TCTGCATCCCTATTCCGACTACAACAGTACTATGAATCAGTTCACCTCTCCTCCTGTATG
JMSF043G03+           TCTGCATCCCTATTCCGACTACAACAGTACTATGAATCAGTTCACCTCTCCTCCTGTATG
                      ____________________________________________________________
consensus             TCTGCATCCCTATTCCGACTACAACAGTACTATGAATCAGTTCACCTCTCCTCCTGTATG
 
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JMFS027F01+           CGTGCACATATAAAGATTGAAATATCTAATATAATCTAAATCAAATCCAATTATTTATGA
JMFS108A07+           CGTGCACATATACAGATTGAAATATCTAATATAATCTAAATCAAATCCAATTATTTATGA
JMSF043G03+           CGTGCACATATACAGATTGAAATATCTAATATAATCTAAATCAAATCCAATTATTTATGA
                      ____________________________________________________________
consensus             CGTGCACATATACAGATTGAAATATCTAATATAATCTAAATCAAATCCAATTATTTATGA
 
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JMFS027F01+           AAGTGCAGGCAGTATAATCAACGGAATCCTATGAAACTGAAGGGATTAACGATGGAGAAA
JMFS108A07+           AAGTGCAGGCAGTATAATCAACGGAATCCTATGAAACTGAAGGGATTAACGATGGAGAAA
JMSF043G03+           AAGTGCAGGCAGTATAATCAACGGAATCCTATGAAACTGAAGGGATTAACGATGGAGAAA
                      ____________________________________________________________
consensus             AAGTGCAGGCAGTATAATCAACGGAATCCTATGAAACTGAAGGGATTAACGATGGAGAAA
 
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JMFS027F01+           AGGAACTAGGGTTTTGGTGATCTGATCATGGAAGGAGAAGACGAGTGAGATTTAGAGAAT
JMFS108A07+           AGGAACTAGGGTTTTGGTGATCTGATCATGGAAGGAGAAGACGAGTGAGA          
JMSF043G03+           AGGAACTAGGGTTTTGGTGATCTGATCATGGAAGGAGAAGACGAGTGAGATTTAGAGAAT
                      ____________________________________________________________
consensus             AGGAACTAGGGTTTTGGTGATCTGATCATGGAAGGAGAAGACGAGTGAGATTTAGAGAAT
 
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JMFS027F01+           TGTGGGAAAAATATGAGCAGAGAGGAAATGGCGTATTATAACGATAGAGAGTGA      
JMSF043G03+           TGTGGGAAAAATATGAGCAGAGAGGAAATGGCGTATTATAACGATAGAGAGTGAGACTTC
                      ____________________________________________________________
consensus             TGTGGGAAAAATATGAGCAGAGAGGAAATGGCGTATTATAACGATAGAGAGTGAGACTTC