Contig 006675:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS027F06Sequence562006675 (2)ref|XP_011076286.1|2e-39PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase A
JMSF043A19Sequence770006675 (2)ref|XP_011076286.1|6e-63PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase A

Alignment

This contig is upended


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JMSF043A19+                     GAAAGGTCAAGGTTTACCAATGAAGCCAAGCTAGCCCCAAAACCATTCGG
                      ____________________________________________________________
consensus                       GAAAGGTCAAGGTTTACCAATGAAGCCAAGCTAGCCCCAAAACCATTCGG
 
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JMSF043A19+           CAAAGAACCACTAAAATTATTCACACTCAAATCAAGTTTCTTCAATCTTTTACATTGAAT
                      ____________________________________________________________
consensus             CAAAGAACCACTAAAATTATTCACACTCAAATCAAGTTTCTTCAATCTTTTACATTGAAT
 
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JMFS027F06+                                              GAGAAATATACAAAGTTTGAAGGTA
JMSF043A19+           CAGTGTTGCAGGCAAAGACCCATTCAAGAAATTCTGAGAAATATACAAAGTTTGAAGGTA
                      ____________________________________________________________
consensus             CAGTGTTGCAGGCAAAGACCCATTCAAGAAATTCTGAGAAATATACAAAGTTTGAAGGTA
 
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JMFS027F06+           ATTAAGCCCCCCAACCTCAGAAGGCAAAGGCCCAGACAAAGAATTCCCATTAAGAACCAA
JMSF043A19+           ATTAAGCCCCCCAACCTCAGAAGGCAAAGGCCCAGACAAAGAATTCCCATTAAGAACCAA
                      ____________________________________________________________
consensus             ATTAAGCCCCCCAACCTCAGAAGGCAAAGGCCCAGACAAAGAATTCCCATTAAGAACCAA
 
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JMFS027F06+           ACTTTGCAAACCTAGAGCTCTAAAGAGACCAGGAGGGATGCTTCCATTAAGCCTATTATT
JMSF043A19+           ACTTTGCAAACCTAGAGCTCTAAAGAGACCAGGAGGGATGCTTCCATTAAGCCTATTATT
                      ____________________________________________________________
consensus             ACTTTGCAAACCTAGAGCTCTAAAGAGACCAGGAGGGATGCTTCCATTAAGCCTATTATT
 
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JMFS027F06+           CCTTAAATTCAAATGTCTGAGCTCAGAGAGTGAGCCAAGGGAAGAAGAAAGAACCCCAGA
JMSF043A19+           CCTTAAATTCAAATGTCTGAGCTCAGAGAGTGAGCCAAGGGAAGAAGAAAGAACCCCAGA
                      ____________________________________________________________
consensus             CCTTAAATTCAAATGTCTGAGCTCAGAGAGTGAGCCAAGGGAAGAAGAAAGAACCCCAGA
 
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JMFS027F06+           TAGGCTCTTCTTGGGAATGGTCACAGAGACAACTCTCTGGTCCTTGCAAGTAATACCATT
JMSF043A19+           TAGGCTCTTCTTGGGAATGGTCACAGAGACAACTCTCTGGTCCTTGCAAGTAATACCATT
                      ____________________________________________________________
consensus             TAGGCTCTTCTTGGGAATGGTCACAGAGACAACTCTCTGGTCCTTGCAAGTAATACCATT
 
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JMFS027F06+           CCATGAACATGGGGTTTCATCAGAGTAATTCCAGTTATTCAGTGACCCTTCTGGGTCTTC
JMSF043A19+           CCATGAACATGGGGTTTCATCAGAGTAATTCCAGTTATTCAGTGACCCTTCTGGGTCTTC
                      ____________________________________________________________
consensus             CCATGAACATGGGGTTTCATCAGAGTAATTCCAGTTATTCAGTGACCCTTCTGGGTCTTC
 
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JMFS027F06+           TAAAACAGATTGCTTGAAAGACAAAAGGGCTTTTGCTTCGTCATTCAAAGAACTCACCAG
JMSF043A19+           TAAAACAGATTGCTTGAAAGACAAAAGGGCTTTTGCTTCGTCATTCAAAGAACTCACCAG
                      ____________________________________________________________
consensus             TAAAACAGATTGCTTGAAAGACAAAAGGGCTTTTGCTTCGTCATTCAAAGAACTCACCAG
 
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JMFS027F06+           AGCTTGCGAATTGCAGAAAATCAATATGAACAATGC                        
JMSF043A19+           AGCTTGCGAATTGCAGAAAATCAATATGAACAATGCCAAAGCTAACATTTTTTTCCTTTC
                      ____________________________________________________________
consensus             AGCTTGCGAATTGCAGAAAATCAATATGAACAATGCCAAAGCTAACATTTTTTTCCTTTC
 
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JMSF043A19+           TTCCAAGAAAATGTGGGTGAAAAAAAAAGAAAAGTTGGGTGTCAAAGAGCTTACCTTTGT
                      ____________________________________________________________
consensus             TTCCAAGAAAATGTGGGTGAAAAAAAAAGAAAAGTTGGGTGTCAAAGAGCTTACCTTTGT
 
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JMSF043A19+           GCAACTGAAAACCAAGTTGAGGCAGAGAAAGTTTAGAGAGAGAAACAATGGAGGTCAGGA
                      ____________________________________________________________
consensus             GCAACTGAAAACCAAGTTGAGGCAGAGAAAGTTTAGAGAGAGAAACAATGGAGGTCAGGA
 
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JMSF043A19+           GAGCGAGTAAAAAAGCAAGCTTTGACAGTGAAGTAGTGAGAGAAGAAAAAGGGTGTATTC
                      ____________________________________________________________
consensus             GAGCGAGTAAAAAAGCAAGCTTTGACAGTGAAGTAGTGAGAGAAGAAAAAGGGTGTATTC