Contig 006674:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF042L20+                                             ACATCAGACAGGTAGAAATTGCATGT
                      ____________________________________________________________
consensus                                               ACATCAGACAGGTAGAAATTGCATGT
 
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JMSF042L20+           ATCTTCCCCACCAATGACAATGATTTTGTTCCTCCACGATGAGCAGCTATGACTCTCACG
                      ____________________________________________________________
consensus             ATCTTCCCCACCAATGACAATGATTTTGTTCCTCCACGATGAGCAGCTATGACTCTCACG
 
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JMSF034I22+                                                               GTATTCAA
JMSF042L20+           CTTGGTTGGTGGGGTGCCAGATGGTACAACACGTTTCCACGTGAATGTCTCTGTATTCAA
                      ____________________________________________________________
consensus             CTTGGTTGGTGGGGTGCCAGATGGTACAACACGTTTCCACGTGAATGTCTCTGTATTCAA
 
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JMSF034I22+           TACATAGAGATCATCATAGTATATTTCACTACCCTCAGATTTTCCACATCCACCAAATAT
JMSF042L20+           TACATAGAGATCATCATAGTATATTTCACTACCCTCAGATTTTCCACATCCACCAAATAT
                      ____________________________________________________________
consensus             TACATAGAGATCATCATAGTATATTTCACTACCCTCAGATTTTCCACATCCACCAAATAT
 
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JMSF034I22+           AAATAGCCGTCTACCAATAAGGGCTGCACTGTGGCCTTCCCTAGGTTCAGGCCCATCACC
JMSF042L20+           AAATAGCCGTCTACCAATAAGGGCTGCACTGTGGCCTTCCCTAGGTTCAGGCCCATCACC
                      ____________________________________________________________
consensus             AAATAGCCGTCTACCAATAAGGGCTGCACTGTGGCCTTCCCTAGGTTCAGGCCCATCACC
 
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JMSF034I22+           TCTTAAACTTGGTGAGATCCATGTGTTAGAAGAAGTGTCCAGAATATGCAAATCACCAAG
JMSF042L20+           TCTTAAACTTGGTGAGATCCATGTGTTAGAAGAAGTGTCCAGAATATGCAAATCACCAAG
                      ____________________________________________________________
consensus             TCTTAAACTTGGTGAGATCCATGTGTTAGAAGAAGTGTCCAGAATATGCAAATCACCAAG
 
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JMSF034I22+           AGGCCTTCTTCCATCGGTACCCCCAAAGACAAAAAGATTGTCGCCAACTGTGGTACAACT
JMSF042L20+           AGGCCTTCTTCCATCGGTACCCCCAAAGACAAAAAGATTGTCGCCAACTGTGGTACAACT
                      ____________________________________________________________
consensus             AGGCCTTCTTCCATCGGTACCCCCAAAGACAAAAAGATTGTCGCCAACTGTGGTACAACT
 
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JMSF034I22+           ATGGCTGTCCCTCGGTATAGGCACTGCTCCTTTCATCACAGGCTCACTCCACATCCTATT
JMSF042L20+           ATGGCTGTCCCTCGGTATAGGCACTGCTCCTTTCATCACAGGCTCACTCCACATCCTATT
                      ____________________________________________________________
consensus             ATGGCTGTCCCTCGGTATAGGCACTGCTCCTTTCATCACAGGCTCACTCCACATCCTATT
 
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JMSF034I22+           AACAGTATCGAAGACATGAACTTGGTTAGTCTGGCAGTCATCCTTGCCATAGCCGCCAAA
JMSF042L20+           AACAGTATCGAAGACATGAACTTGGTTAGTCTGGCAGTCATCCTTGCCATAGCCGCCAAA
                      ____________________________________________________________
consensus             AACAGTATCGAAGACATGAACTTGGTTAGTCTGGCAGTCATCCTTGCCATAGCCGCCAAA
 
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JMSF034I22+           CACATAGAGAAGTTTCCCTCCCCCGATGGCGTTGCAGGTGTGGCCCCACCTCTTACCGGG
JMSF042L20+           CACATAGAGAAGTTTCCCTCCCCCGATGGCGTTGCAGGTGTGGCCCCACCTCTTACCGGG
                      ____________________________________________________________
consensus             CACATAGAGAAGTTTCCCTCCCCCGATGGCGTTGCAGGTGTGGCCCCACCTCTTACCGGG
 
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JMSF034I22+           CCCAACACCCACTCCTTGTACCCTCACCTTATCCCACCTCATGTTATTGAACCCCAAAAA
JMSF042L20+           CCCAACACCCACTCCTTGTACCCTCACCTTATCCCACCTCATGTTATTGAACCCCAAAAA
                      ____________________________________________________________
consensus             CCCAACACCCACTCCTTGTACCCTCACCTTATCCCACCTCATGTTATTGAACCCCAAAAA
 
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JMSF034I22+           AAGGGTGAAGAAATTTTGCAAGTGTAGTGAGCGAAGAAGATTTGTGAGAGAGTGAAGAAA
JMSF042L20+           AAGGGTGAAGAAATTTTGCAAGTGTAGTGAGCGAAGAAGATTTGTGAGAGAGTGAAGAAA
                      ____________________________________________________________
consensus             AAGGGTGAAGAAATTTTGCAAGTGTAGTGAGCGAAGAAGATTTGTGAGAGAGTGAAGAAA
 
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JMSF034I22+           CAATGGAATTTTAGGGGTTTGTTTCGGTAATCGTTACTGGGTTTTAAGCGTTTTCGTTTC
JMSF042L20+           CAATGGAATTTTAGGGGTTTGTTTCGGTAATCGTTACTGGGTTTTAAGCGTTTTCGTTTC
                      ____________________________________________________________
consensus             CAATGGAATTTTAGGGGTTTGTTTCGGTAATCGTTACTGGGTTTTAAGCGTTTTCGTTTC
 
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JMSF034I22+           CGGGATTTTTCATGCACTCACACAAAACACTTTGCCATTAACAGCTGTCACAGACTC   
JMSF042L20+           CGGGATTTTTCATGCACTCACACAAAACACTTTGCCATTAACAGCTGTCACAGACTCCCC
                      ____________________________________________________________
consensus             CGGGATTTTTCATGCACTCACACAAAACACTTTGCCATTAACAGCTGTCACAGACTCCCC