| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017N13 | Sequence | 588 | 006673 (9) | ref|XP_009761754.1| | 155 | PREDICTED: uncharacterized protein LOC104213893 [Nicotiana sylvestris] | 751 | 006673 (9) | ref|XP_006342376.1| | 1e-47 | PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum tuberosum] |
| JMFN005K07 | Sequence | 462 | 006673 (9) | ||||||||
| JMFN012E24 | Sequence | 590 | 006673 (9) | ref|XP_009761754.1| | 166 | PREDICTED: uncharacterized protein LOC104213893 [Nicotiana sylvestris] | |||||
| JMSF014I13 | Sequence | 578 | 006673 (9) | ref|XP_009761754.1| | 156 | PREDICTED: uncharacterized protein LOC104213893 [Nicotiana sylvestris] | 796 | 006673 (9) | ref|XP_009761754.1| | 175 | PREDICTED: uncharacterized protein LOC104213893 [Nicotiana sylvestris] |
| JMSF035F07 | Sequence | 690 | 006673 (9) | ref|XP_009761754.1| | 187 | PREDICTED: uncharacterized protein LOC104213893 [Nicotiana sylvestris] | 464 | 005816 (6) | ref|XP_009591013.1| | 6e-36 | PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Nicotiana tomentosi |
| JMSF042J24 | Sequence | 706 | 006673 (9) | ref|XP_009761754.1| | 172 | PREDICTED: uncharacterized protein LOC104213893 [Nicotiana sylvestris] | 746 | 006673 (9) | ref|XP_009761754.1| | 183 | PREDICTED: uncharacterized protein LOC104213893 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFN005K07+ TTTTTGTTTTCCTTTTCAGTATTTTTTTTTCTTTCTTTGT
____________________________________________________________
consensus TTTTTGTTTTCCTTTTCAGTATTTTTTTTTCTTTCTTTGT
. : . : . : . : . : . :
JMFN005K07+ TTTTTTGGTTTTTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAGCCCTTGAGGTTGA
____________________________________________________________
consensus TTTTTTGGTTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGCCCTTGAGGTTGA
. : . : . : . : . : . :
JMFN005K07+ AATTTCAGTAGAGGCAGAACTAGAATCTCTAATGCATTCAGATATACAATGGTCAGAAGG
rJMFF017N13- TACAATGGTCAGAAGG
____________________________________________________________
consensus AATTTCAGTAGAGGCAGAACTAGAATCTCTAATGCATTCAGATATACAATGGTCAGAAGG
. : . : . : . : . : . :
JMFN005K07+ GAAAACACATAGGTTAAAACAGTATATAGATGGAAATTACATTATGTGCCCACACGG-TA
rJMFF017N13- GAAAACACATAGGTTAAAACAGTATATAGATGGAAATTACATTATGTGCCCACACGG-TA
rJMSF042J24- ATGGAAATTACATTATGTGCCCACACGGNTA
rJMSF014I13- AAACACATAGGTTAAAACAGTATATAGATGGAAATTACATTATGTGCCCACACGG-TA
____________________________________________________________
consensus GAAAACACATAGGTTAAAACAGTATATAGATGGAAATTACATTATGTGCCCACACGG-TA
. : . : . : . : . : . :
JMFN005K07+ TGCCTCGAGCATAAACCATAGAAAGCAACTGCAAACAAAATATTCCCACCTCCACGAACA
rJMFF017N13- TGCCTCGAGCATAAACCATAGAAAGCAACTGCAAACAAAATATTCCCACCTCCACGAACA
rJMSF042J24- TGCCTCGAGCATAAACCATAGAAAGCAACTGCAAACAAAATATTCCCACCTCCACGAACA
rJMSF014I13- TGCCTCGAGCATAAACCATAGAAAGCAACTGCAAACAAAATATTCCCACCTCCACGAACA
____________________________________________________________
consensus TGCCTCGAGCATAAACCATAGAAAGCAACTGCAAACAAAATATTCCCACCTCCACGAACA
. : . : . : . : . : . :
JMFN005K07+ TCTAGTGCACTTAATTTCACAGGGCGACTAAGAAAATCAAACCGCAGTTAATATATCCTC
rJMFF017N13- TCTAGTGCACTTAATTTCACAGGGCGACTAAGAAAATCAAACCGCAGTTAATATATCCTC
rJMSF042J24- TCTAGTGCACTTAATTTCACAGGGCGACTAAGAAAATCAAACCGCAGTTAATATATCCTC
rJMSF014I13- TCTAGTGCACTTAATTTCACAGGGCGACTAAGAAAATCAAACCGCAGTTAATATATCCTC
____________________________________________________________
consensus TCTAGTGCACTTAATTTCACAGGGCGACTAAGAAAATCAAACCGCAGTTAATATATCCTC
. : . : . : . : . : . :
JMFN005K07+ TAGTTCTTTATACCAGCAATGCCGGGAGTTGCAGCAGTAGCAGCGCCTTGAAGATCAGAC
rJMFF017N13- TAGTTCTTTATACCAGCAATGCCGGGAGTTGCAGCAGTAGCAGCGCCTTGAAGATCAGAC
rJMSF042J24- TAGTTCTTTATACCAGCAATGCCGGGAGTTGCAGCAGTAGCAGCGCCTTGAAGATCAGAC
rJMSF014I13- TAGTTCTTTATACCAGCAATGCCGGGAGTTGCAGCAGTAGCAGCGCCTTGAAGATCAGAC
____________________________________________________________
consensus TAGTTCTTTATACCAGCAATGCCGGGAGTTGCAGCAGTAGCAGCGCCTTGAAGATCAGAC
. : . : . : . : . : . :
JMFN005K07+ AGGGAGAAAGACCGCCACGAAGGGAACTTCTGTTCGGGATGTGGCAAGGATGGCTCGTTA
rJMFF017N13- AGGGAGAAAGACCGCCACGAAGGGAACTTCTGTTCGGGATGTGGCAAGGATGGCTCGTTA
rJMSF042J24- AGGGAGAAAGACCGCCACGAAGGGAACTTCTGTTCGGGATGTGGCAAGGATGGCTCGTTA
rJMSF014I13- AGGGAGAAAGACCGCCACGAAGGGAACTTCTGTTCGGGATGTGGCAAGGATGGCTCGTTA
____________________________________________________________
consensus AGGGAGAAAGACCGCCACGAAGGGAACTTCTGTTCGGGATGTGGCAAGGATGGCTCGTTA
. : . : . : . : . : . :
JMFN005K07+ CTA
rJMFF017N13- CTAGATCGTCGTGGGTGAGGAGGAAGAGGCGGAAGGTTGAAACAAGGTGGTGATGATGGA
rJMSF042J24- CTAGATCTTCGTGGGTGAGGAGGAAGAGGCGGAAGGTTGAAACAAGGTGGTGATGATGGA
rJMSF014I13- CTAGATCTTCGTGGGTGAGGAGGAAGAGGCGGAAGGTTGAAACAAGGTGGTGATGATGGA
JMSF035F07+ GTGGTGATGATGGA
____________________________________________________________
consensus CTAGATCTTCGTGGGTGAGGAGGAAGAGGCGGAAGGTTGAAACAAGGTGGTGATGATGGA
. : . : . : . : . : . :
rJMFF017N13- GTAGAGTTGAAAGACTCGGTGCTATGGTGGTTCTCGGAGCAGCACGTGGTTGCGGCAAGA
rJMSF042J24- GTAGAGTTGAAAGACTCGGTGCTATGGTGGTTCTCGGAGCAGCACGTGGTTGCGGCAAGA
rJMSF014I13- GTAGAGTTGAAAGACTCGGTGCTATGGTGGTTCTCGGAGCAGCACGTGGTTGCGGCAAGA
JMSF035F07+ GTAGAGTTGAAAGACTCGGTGCTATGGTGGTTCTCGGAGCAGCACGTGGTTGCGGCAAGA
____________________________________________________________
consensus GTAGAGTTGAAAGACTCGGTGCTATGGTGGTTCTCGGAGCAGCACGTGGTTGCGGCAAGA
. : . : . : . : . : . :
rJMFF017N13- GCCAACGAGCTTCTAGCGTTGGTAGGTCTCTTGTACATACTGCCACTGTTGCTTCTATTG
rJMSF042J24- GCCAACGAGCTTCTAGCGTTGGTAGGTCTCTTGTACATACTGCCACTGTTGCTTCTATTG
rJMSF014I13- GCCAACGAGCTTCTAGCGTTGGTAGGTCTCTTGTACATACTGCCACTGTTGCTTCTATTG
JMSF035F07+ GCCAACGAGCTTCTAGCGTTGGTAGGTCTCTTGTACATACTGCCACTGTTGCTTCTATTG
JMFN012E24+ CTTGTACATACTGCCACTGTTGCTTCTATTG
JMFF017N13+ CTATTG
JMSF042J24+ TAGCGTTGGTAGGTCTCTTGTACATACTGCCACTGTTGCTTCTATTG
____________________________________________________________
consensus GCCAACGAGCTTCTAGCGTTGGTAGGTCTCTTGTACATACTGCCACTGTTGCTTCTATTG
. : . : . : . : . : . :
rJMFF017N13- ATAAAATTATGATTCCTGTCGAAGAAATTGTTGCGAGCAAGTTCGTTCTTGCGTTTCCTT
rJMSF042J24- ATAAAATTATGATTCCTGTCGAAGAAATTGTTGCGAGCAAGTTCGTTCTTGCGTTTCCTT
rJMSF014I13- ATAAAATTATGATTCCTGTCGAAGAAATTGTTGCGAGCAAGTTCGTTCTTGCGTTTCCTT
JMSF035F07+ ATAAAATTATGATTCCTGTCGAAGAAATTGTTGCGAGCAAGTTCGTTCTTGCGTTTCCTT
JMFN012E24+ ATAAAATTATGATTCCTGTCGAAGAAATTGTTGCGAGCAAGTTCGTTCTTGCGTTTCCTT
JMFF017N13+ ATAAAATTATGATTCCTGTCGAAGAAATTGTTGCGAGCAAGTTCGTTCTTGCGTTTCCTT
JMSF014I13+ AATTATGATTCCTGTCGAAGAAATTGTTGCGAGCAAGTTCGTTCTTGCGTTTCCTT
JMSF042J24+ ATAAAATTATGATTCCTGTCGAAGAAATTGTTGCGAGCAAGTTCGTTCTTGCGTTTCCTT
____________________________________________________________
consensus ATAAAATTATGATTCCTGTCGAAGAAATTGTTGCGAGCAAGTTCGTTCTTGCGTTTCCTT
. : . : . : . : . : . :
rJMFF017N13- GTGTACGGGTTCTCGGGCTTGACAATGTCTTTCAAGGAGGAACAAGAAGTTGCATCTGAT
rJMSF042J24- GTGTACGGGTTCTCGGGCTTGACAATGTCTTTCAAGGAGGAACAAGAAGTTGCATCTGAT
rJMSF014I13- GTGTACGGGTTCTCGGGCTTGACAATGTCTTTCAAGGAGGAACAAGAAGTTGCATCTGAT
JMSF035F07+ GTGTACGGGTTCTCGGGCTTGACAATGTCTTTCAAGGAGGAACAAGAAGTTGCATCTGAT
JMFN012E24+ GTGTACGGGTTCTCGGGCTTGACAATGTCTTTCAAGGAGGAACAAGAAGTTGCATCTGAT
JMFF017N13+ GTGTACGGGTTCTCGGGCTTGACAATGTCTTTCAAGGAGGAACAAGAAGTTGCATCTGAT
JMSF014I13+ GTGTACGGGTTCTCGGGCTTGACAATGTCTTTCAAGGAGGAACAAGAAGTTGCATCTGAT
JMSF042J24+ GTGTACGGGTTCTCGGGCTTGACAATGTCTTTCAAGGAGGAACAAGAAGTTGCATCTGAT
____________________________________________________________
consensus GTGTACGGGTTCTCGGGCTTGACAATGTCTTTCAAGGAGGAACAAGAAGTTGCATCTGAT
. : . : . : . : . : . :
rJMFF017N13- AGACTCGTAAATGATTTGGATTTGCCAGCATAGAAATTTGATATGCCTCTCTTTATCGGT
rJMSF042J24- AGACTCGTAAATGATTTGGATTTGCCAGCATAGAAATTTGATATGCCTCTCTTTATCGGT
rJMSF014I13- AGACTCGTAAATGATTTGGATTTGCCAGCATAGAAATTTGATATGCCTCTCTTTATCGGT
JMSF035F07+ AGACTCGTAAATGATTTGGATTTGCCAGCATAGAAATTTGATATGCCTCTCTTTATCGGT
JMFN012E24+ AGACTCGTAAATGATTTGGATTTGCCAGCATAGAAATTTGATATGCCTCTCTTTATCGGT
JMFF017N13+ AGACTCGTAAATGATTTGGATTTGCCAGCATAGAAATTTGATATGCCTCTCTTTATCGGT
JMSF014I13+ AGACTCGTAAATGATTTGGATTTGCCAGCATAGAAATTTGATATGCCTCTCTTTATCGGT
JMSF042J24+ AGACTCGTAAATGATTTGGATTTGCCAGCATAGAAATTTGATATGCCTCTCTTTATCGGT
____________________________________________________________
consensus AGACTCGTAAATGATTTGGATTTGCCAGCATAGAAATTTGATATGCCTCTCTTTATCGGT
. : . : . : . : . : . :
rJMFF017N13- AAAACCTCCTCTGGATCCTCCAAATTACCCAGAGCGCCATCTTTGGATGAGCTCTGCACT
rJMSF042J24- AAAACCTCCTCTAGATCCTCCAAATTACCCAGAGCGCCATCTTTGGATGAGCTCTGCACT
rJMSF014I13- AAAACCTCCTCTAGATCCTCCAAATTACCCAGAGCGCCATCTTTGGATGAGCTCTGCACT
JMSF035F07+ AAAACCTCCTCTAGATCCTCCAAATTACCCAGAGCGCCATCTTTGGATGAGCTCTGCACT
JMFN012E24+ AAAACCTCCTCTAGATCCTCCAAATTACCCAGAGCGCCATCTTTGGATGAGCTCTGCACT
JMFF017N13+ AAAACCTCCTCTAGATCCTCCAAATTACCCAGAGCGCCATCTTTGGATGAGCTCTGCACT
JMSF014I13+ AAAACCTCCTCTAGATCCTCCAAATTACCCAGAGCGCCATCTTTGGATGAGCTCTGCACT
JMSF042J24+ AAAACCTCCTCTAGATCCTCCAAATTACCCAGAGCGCCATCTTTGGATGAGCTCTGCACT
____________________________________________________________
consensus AAAACCTCCTCTAGATCCTCCAAATTACCCAGAGCGCCATCTTTGGATGAGCTCTGCACT
. : . : . : . : . : . :
rJMFF017N13- TCCTCGCCTTCGCTGT
rJMSF042J24- TCCTCGCCTTCGCTGTCCGACGAAGACTGTCCCGCCGGGG-AATCATCGCTATTCC
rJMSF014I13- TCCTCGCCTTCGCTGTCCGACGAANACTGTCCCGCCNGGGNAATCATCGCTATTCCTCCC
JMSF035F07+ TCCTCGCCTTCGCTGTCCGACGAAGACTGTCCCGCCGGGG-AATCATCGCTATTCCTCCC
JMFN012E24+ TCCTCGCCTTCGCTGTCCGACGAAGACTGTCCCGCCGGGG-AATCATCGCTATTCCTCCC
JMFF017N13+ TCCTCGCCTTCGCTGTCCGACGAAGACTGTCCCGCCGGGG-AATCATCGCTATTCCTTCC
JMSF014I13+ TCCTCGCCTTCGCTGTCCGACGAAGACTGTCCCGCCGGGG-AATCATCGCTATTCCTCCC
JMSF042J24+ TCCTCGCCTTCGCTGTCCGACGAAGACTGTCCCGCCGGGG-AATCATCGCTATTCCTCCC
____________________________________________________________
consensus TCCTCGCCTTCGCTGTCCGACGAAGACTGTCCCGCCGGGG-AATCATCGCTATTCCTCCC
. : . : . : . : . : . :
rJMSF014I13- GATCGACGAA
JMSF035F07+ GATCGACGAAGACGACGAGCTCCGATCTTCGTCCTCCTCCACCTCGGCTGCACTTCTCCG
JMFN012E24+ GATCGACGAAGACGACGAGCTCCGATCTTCGTCCTCCTCCACCTCGGCTGCACTTCTCCG
JMFF017N13+ GATCGACGAAGACGACGAGCTCCGATCTTCGTCCTCCTCCACCTCGGCTGCACTTCTCCG
JMSF014I13+ GATCGACGAAGACGACGAGCTCCGATCTTCGTCCTCCTCCACCTCGGCTGCACTTCTCCG
JMSF042J24+ GATCGACGAAGACGACGAGCTCCGATCTTCGTCCTCCTCCACCTCGGCTGCACTTCTCCG
____________________________________________________________
consensus GATCGACGAAGACGACGAGCTCCGATCTTCGTCCTCCTCCACCTCGGCTGCACTTCTCCG
. : . : . : . : . : . :
JMSF035F07+ GTCTCCGATGGAGAACTCAGCCGAATTGTAGATCGCCGCCATACACGCCATCCCGCGCAA
JMFN012E24+ GTCTCCGATGGAGAACTCAGCCGAATTGTAGATCGCCGCCATACACGCCATCCCGCGCAA
JMFF017N13+ GTCTCCGATGGAGAACTCAGCCGAATTGTAGATCGCCGCCGTACACGCCATCCCGCGCAA
JMSF014I13+ GTCTCCGATGGAGAACTCAGCCGAATTGTAGATCGCCGCCATACACGCCATCCCGCGCAA
JMSF042J24+ GTCTCCGATGGAGAACTCAGCCGAATTGTAGATCGCCGCCATACACGCCATCCCGCGCAA
____________________________________________________________
consensus GTCTCCGATGGAGAACTCAGCCGAATTGTAGATCGCCGCCATACACGCCATCCCGCGCAA
. : . : . : . : . : . :
JMSF035F07+ CCGTTCAATCTGATGACCACCAGAATTGTTCCTCTCTAATGCAATCGACATAGCTTCAGT
JMFN012E24+ CCGTTCAATCTGATGACCACCAGAATTGTTCCTCTCTAATGCAATCGACATAGCTTCAGT
JMFF017N13+ CCGTTCAATCTGATGACCACCAGAATTGTTCCTCTCTAATGCAATCGACATAGCTTCAGT
JMSF014I13+ CCGTTCAATCTGATGACCACCAGAATTGTTCCTCTCTAATGCAATCGACATAGCTTCAGT
JMSF042J24+ CCGTTCAATCTGATGACCACCAGAATTGTTCCTCTCTAATGCAATCGACATAGCTTCAGT
____________________________________________________________
consensus CCGTTCAATCTGATGACCACCAGAATTGTTCCTCTCTAATGCAATCGACATAGCTTCAGT
. : . : . : . : . : . :
JMSF035F07+ GTATTGGAGAAGTAATCAGAGATACATACACACAGATTGATAGATAGATATAGAGAGAGA
JMFN012E24+ GTATTGGAGAAGTAATCAGAGATACATACACACAGATTGATAGATAGATATAGAGAGAGA
JMFF017N13+ GTATTGGAGAAGTAATCAGAGATACATACACACAGATTGATAGATAGATATAGAGAGAGA
JMSF014I13+ GTATTGGAGAAGTAATCAGAGATACATACACACAGATTGATAGATAGATATAGAGAGAGA
JMSF042J24+ GTATTGGAGAAGTAATCAGAGATACATACACACAGATTGATAGATAGATATAGAGAGAGA
____________________________________________________________
consensus GTATTGGAGAAGTAATCAGAGATACATACACACAGATTGATAGATAGATATAGAGAGAGA
. : . : . : . : . : . :
JMSF035F07+ GAGAGAGCAATTTAGT
JMFN012E24+ GAGAGAGCAATTTAGTGAGA
JMFF017N13+ GAGAGAGCAATTTAGTGAGAGAGATGAGAAAGGGAATAAAG
JMSF014I13+ GAGAGAGCAATTTAGTGAGAGAGATGAGAAAGGGAATAAAG
JMSF042J24+ GAGAGAGCAATTTAGTGAGAGAGATGAGAAAGGGAATAAAGTCAATAAACAGAGTAAGAT
____________________________________________________________
consensus GAGAGAGCAATTTAGTGAGAGAGATGAGAAAGGGAATAAAGTCAATAAACAGAGTAAGAT
. : . : . : . : . : . :
JMSF042J24+ GAAAGCCTTATCTTTATCCAGACAGAGTCGACAAGATATTGCAATTTGGATAATTAAATC
____________________________________________________________
consensus GAAAGCCTTATCTTTATCCAGACAGAGTCGACAAGATATTGCAATTTGGATAATTAAATC