Contig 006672:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF042I04Sequence791006672 (2)ref|XP_009605951.1|8e-51PREDICTED: alpha/beta hydrolase domain-containing protein 17B-like [Nicotiana t748006672 (2)ref|XP_009795701.1|1e-67PREDICTED: alpha/beta hydrolase domain-containing protein 17B-like [Nicotiana s

Alignment

This contig is upended


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rJMSF042I04-                                                                  AATC
                      ____________________________________________________________
consensus                                                                     AATC
 
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rJMSF042I04-          AGATAGAGAGAGGGGGGGTTGAGGGGAGTTGAGAAATGAAAAATACATACATGACCAAGA
                      ____________________________________________________________
consensus             AGATAGAGAGAGGGGGGGTTGAGGGGAGTTGAGAAATGAAAAATACATACATGACCAAGA
 
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rJMSF042I04-          AAAAAGAAAAATCAATGAAGTTATTGACAGAAACCATCGCATTCGCATACCTACTGTCAG
                      ____________________________________________________________
consensus             AAAAAGAAAAATCAATGAAGTTATTGACAGAAACCATCGCATTCGCATACCTACTGTCAG
 
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rJMSF042I04-          TGACGAAAGATCTCGACATAACTCTTGGCATTCCTAGTTCCACACCGAGTTAGATTCAAG
                      ____________________________________________________________
consensus             TGACGAAAGATCTCGACATAACTCTTGGCATTCCTAGTTCCACACCGAGTTAGATTCAAG
 
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rJMSF042I04-          CCTAATCGGAAGGTTTTCTGTCGTAAAACGCCACCCTTCACCACAAACTATTTGCACAAG
                      ____________________________________________________________
consensus             CCTAATCGGAAGGTTTTCTGTCGTAAAACGCCACCCTTCACCACAAACTATTTGCACAAG
 
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rJMSF042I04-          CAAGATCCAGAGTGAAGCTGATATCTAGCTAACTCGTGTTAGCTCATTTAGCAAGCTTCA
                      ____________________________________________________________
consensus             CAAGATCCAGAGTGAAGCTGATATCTAGCTAACTCGTGTTAGCTCATTTAGCAAGCTTCA
 
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rJMSF042I04-          TTGGCAACTCGAGATTTGATACCTTTTGAAGTGATGGTCCGATCCAACAAGAATTGCGAC
                      ____________________________________________________________
consensus             TTGGCAACTCGAGATTTGATACCTTTTGAAGTGATGGTCCGATCCAACAAGAATTGCGAC
 
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rJMSF042I04-          TTTCTTTATATATATATTCATCTTTTCCCAAATCTCAAGCATCTGTTGTTTTTGGATTCG
                      ____________________________________________________________
consensus             TTTCTTTATATATATATTCATCTTTTCCCAAATCTCAAGCATCTGTTGTTTTTGGATTCG
 
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rJMSF042I04-          GTTATGCTCGGGGCATGAGTAAGGTGTGGTTTACTTTGGTTCGAGAAGGAGTGTTTTTCC
                      ____________________________________________________________
consensus             GTTATGCTCGGGGCATGAGTAAGGTGTGGTTTACTTTGGTTCGAGAAGGAGTGTTTTTCC
 
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rJMSF042I04-          ATCGCATTTACAAATTTGCGCAAGTGCCTAATGTACTCCGGATATGTCTCCAAGTTACAA
                      ____________________________________________________________
consensus             ATCGCATTTACAAATTTGCGCAAGTGCCTAATGTACTCCGGATATGTCTCCAAGTTACAA
 
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rJMSF042I04-          TGCCCGCCCCCCTGCACCCACAGCGGATCATACTTCTCTTTCGAAAGCTCCCACAAGCGC
                      ____________________________________________________________
consensus             TGCCCGCCCCCCTGCACCCACAGCGGATCATACTTCTCTTTCGAAAGCTCCCACAAGCGC
 
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rJMSF042I04-          TTCCCATGGGAGAAGTCAACGATGTCATCGGCTGTACCATGGATAACTAAAACCGGGCAG
JMSF042I04+                                                               CCGGGCAG
                      ____________________________________________________________
consensus             TTCCCATGGGAGAAGTCAACGATGTCATCGGCTGTACCATGGATAACTAAAACCGGGCAG
 
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rJMSF042I04-          CTGACTTGCCGTATTTTGTCTATATTTTTAAATATGTCGAACCAGAATGTCATCTTGACG
JMSF042I04+           CTGACTTGCCGTATTTNGTCTATATTTTTAAATATGTCGAACCAGAATGTCATCTTGACG
                      ____________________________________________________________
consensus             CTGACTTGCCGTATTTTGTCTATATTTTTAAATATGTCGAACCAGAATGTCATCTTGACG
 
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rJMSF042I04-          GGATATAAAA                                                  
JMSF042I04+           GGATATAAAACTCGTATTCCAGAAAGTATAGCGCTATGAAGAACAACAGCTTTCAGCCGC
                      ____________________________________________________________
consensus             GGATATAAAACTCGTATTCCAGAAAGTATAGCGCTATGAAGAACAACAGCTTTCAGCCGC
 
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JMSF042I04+           TGTAAACGAGCTGCCAAGTGTAATGTAGGCCCACTACCGACAGATTGGCCATATAGAATC
                      ____________________________________________________________
consensus             TGTAAACGAGCTGCCAAGTGTAATGTAGGCCCACTACCGACAGATTGGCCATATAGAATC
 
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JMSF042I04+           ACTTCCTCTTGCTTAATTCCATATTCGCTCTTCAAACAATTGTAGACAGCTTCTATGTCA
                      ____________________________________________________________
consensus             ACTTCCTCTTGCTTAATTCCATATTCGCTCTTCAAACAATTGTAGACAGCTTCTATGTCA
 
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JMSF042I04+           TAGTATGTGTTGAACTCAGATGGCTGTTAAATAAACGCAAAAAAACACTTCTCAAGAACG
                      ____________________________________________________________
consensus             TAGTATGTGTTGAACTCAGATGGCTGTTAAATAAACGCAAAAAAACACTTCTCAAGAACG
 
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JMSF042I04+           AAGAGAATGAAAAAAACACATTGAAATAATGCTCCAAAGAAGAGAAGGAAAATGGTCTAG
                      ____________________________________________________________
consensus             AAGAGAATGAAAAAAACACATTGAAATAATGCTCCAAAGAAGAGAAGGAAAATGGTCTAG
 
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JMSF042I04+           TCGGTTTTTCTTCCTCTTCCATCTCAAATATTTGAAATTAACAATTTAATGTCAAATTCA
                      ____________________________________________________________
consensus             TCGGTTTTTCTTCCTCTTCCATCTCAAATATTTGAAATTAACAATTTAATGTCAAATTCA
 
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JMSF042I04+           ATTTCTCGATCTGAGCTTTTCTTTATGGAAACTAAGGTGAACTATGATAAAGTATCTATC
                      ____________________________________________________________
consensus             ATTTCTCGATCTGAGCTTTTCTTTATGGAAACTAAGGTGAACTATGATAAAGTATCTATC
 
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JMSF042I04+           CAGTAGCACTTTATATATTCATTACCTTACCAGAAGATCCACCATATCCTGAATAATCAT
                      ____________________________________________________________
consensus             CAGTAGCACTTTATATATTCATTACCTTACCAGAAGATCCACCATATCCTGAATAATCAT
 
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JMSF042I04+           AGCTGCAAACAAAGAAGAAAATTTCATGGTATCAGATAGAAAAGAAACATACCATACCAT
                      ____________________________________________________________
consensus             AGCTGCAAACAAAGAAGAAAATTTCATGGTATCAGATAGAAAAGAAACATACCATACCAT
 
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JMSF042I04+           ACAGCACTGTAAAAAAGAAAGAAAATTTAAGAATCTTTTCAAAATTTCACATCACACTAA
                      ____________________________________________________________
consensus             ACAGCACTGTAAAAAAGAAAGAAAATTTAAGAATCTTTTCAAAATTTCACATCACACTAA
 
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JMSF042I04+           AAGTTTTACCAAAGGCTTCTGCCAAATACATGCAACTAAGCAGATGAAATAACAAACTAA
                      ____________________________________________________________
consensus             AAGTTTTACCAAAGGCTTCTGCCAAATACATGCAACTAAGCAGATGAAATAACAAACTAA
 
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JMSF042I04+           TGGGAAAGCACACACAGATTTTGAAAATAGGAATTCAATAAACAAAAATTTGACCAATTC
                      ____________________________________________________________
consensus             TGGGAAAGCACACACAGATTTTGAAAATAGGAATTCAATAAACAAAAATTTGACCAATTC