Contig 006665:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF041K19+                 GCATCTGAGAAAAGAGGTTGATAGCCATCATATGCTTCCCAGCTTGATCATAAC
                      ____________________________________________________________
consensus                   GCATCTGAGAAAAGAGGTTGATAGCCATCATATGCTTCCCAGCTTGATCATAAC
 
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JMSF041K19+           CAGAGATCATTGCTGACCACGTCACAAGATTTTTCTCAGACATTTCATCGAACACTTGGC
JMSF041P11+                                                      TTCATCGAACACTNGGC
                      ____________________________________________________________
consensus             CAGAGATCATTGCTGACCACGTCACAAGATTTTTCTCAGACATTTCATCGAACACTTGGC
 
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JMSF041K19+           TGGCAAATTTGATATTGCCACACTTAGCATACATGTTGAGGACATGATTGGAGGTGAAAA
JMSF041P11+           TGGCAAATTTGATATTGCCACACTTAGCATACATGTTGAGGACATGATTGGAGGTGAAAA
                      ____________________________________________________________
consensus             TGGCAAATTTGATATTGCCACACTTAGCATACATGTTGAGGACATGATTGGAGGTGAAAA
 
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JMSF041K19+           CATCACACTGCAAGCCAGTCTTAATAGCAGCAGAATGAAGAGAAAGGCCACATCGGAGTG
JMSF041P11+           CATCACACTGCAAGCCAGTCTTAATAGCAGCAGAATGAAGAGAAAGGCCACATCGGAGTG
                      ____________________________________________________________
consensus             CATCACACTGCAAGCCAGTCTTAATAGCAGCAGAATGAAGAGAAAGGCCACATCGGAGTG
 
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JMSF041K19+           CCTTAGTCTTAGAGCAGTGATGCAAAAGTGAAGCAATAGTTTCTGGCACCATCTTCCACG
JMSF041P11+           CCTTAGTCTTAGAGCAGTGATGCAAAAGTGAAGCAATAGTTTCTGGCACCATCTTCCACG
                      ____________________________________________________________
consensus             CCTTAGTCTTAGAGCAGTGATGCAAAAGTGAAGCAATAGTTTCTGGCACCATCTTCCACG
 
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JMSF041K19+           TCTAGGGAATGAAGACACAATGGAATAGTTTGTGCCTTCTGCACTGTCCAATATCAGACA
JMSF041P11+           TCTAGGGAATGAAGACACAATGGAATAGTTTGTGCCTTCTGCACTGTCCAATATCAGACA
                      ____________________________________________________________
consensus             TCTAGGGAATGAAGACACAATGGAATAGTTTGTGCCTTCTGCACTGTCCAATATCAGACA
 
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JMSF041K19+           TGGCAGGATTTCAAGTATGATTAAGAGAAACTCTAATGGTATAGCAGTAATTATCATCTA
JMSF041P11+           TGGCAGGATTTCAAGTATGATTAAGAGAAACTCTAATGGTATAGCAGTAATTATCATCTA
                      ____________________________________________________________
consensus             TGGCAGGATTTCAAGTATGATTAAGAGAAACTCTAATGGTATAGCAGTAATTATCATCTA
 
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JMSF041K19+           ATTTCAGAGTAGAACTCATAAAGCTGGTGAATATGAGTTGAATCATATGTGTATAGCATT
JMSF041P11+           ATTTCAGAGTAGAACTCATAAAGCTGGTGAATATGAGTTGAATCATATGTGTATAGCATT
                      ____________________________________________________________
consensus             ATTTCAGAGTAGAACTCATAAAGCTGGTGAATATGAGTTGAATCATATGTGTATAGCATT
 
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JMSF041K19+           TCTGAGTTCAAGGCTTTATCACTCTTGTAAAGATATAAAAATTGATGCTTCTTTTGTTTC
JMSF041P11+           TCTGAGTTCAAGGCTTTATCACTCTTGTAAAGATATAAAAATTGATGCTTCTTTTGTTTC
                      ____________________________________________________________
consensus             TCTGAGTTCAAGGCTTTATCACTCTTGTAAAGATATAAAAATTGATGCTTCTTTTGTTTC
 
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JMSF041K19+           TTCAGTGATGAATTTCATCAAACACCTGCCGATTCGCAGCAGTAGTACGGTCGTTAGTCG
JMSF041P11+           TTCAGTGATGAATTTCATCAAACACCTGCCGATTCGCAGCAGTAGTACGGTCGTTAGTCG
                      ____________________________________________________________
consensus             TTCAGTGATGAATTTCATCAAACACCTGCCGATTCGCAGCAGTAGTACGGTCGTTAGTCG
 
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JMSF041K19+           CCCACTTCGCCCAGCTGCCGAGCTGGAGTATTTGTCGCCAATCGTAGCCACCAGCTGGAG
JMSF041P11+           CCCACTTCGCCCAGCTGCCGAGCTGGAGTATTTGTCGCCAATCGTAGCCACCAGCTGGAG
                      ____________________________________________________________
consensus             CCCACTTCGCCCAGCTGCCGAGCTGGAGTATTTGTCGCCAATCGTAGCCACCAGCTGGAG
 
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JMSF041K19+           TAATCGGAGACGATGAGTATCGAGAGAGAGGTACTGAAGACTCTTGCTCTTCCCTGACGA
JMSF041P11+           TAATCGGAGACGATGAGTATCGAGAGAGAGGTACTGAAGACTCTTGCTCTTCCCTGACGA
                      ____________________________________________________________
consensus             TAATCGGAGACGATGAGTATCGAGAGAGAGGTACTGAAGACTCTTGCTCTTCCCTGACGA
 
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JMSF041K19+           GTTTTTTTCTCTTGGCCTCGTTTGCAACTCGCGATCCTTTACCTTTGGGATCTAATTTTT
JMSF041P11+           GTTTTTTTCTCTTGGCCTCGTTTGCAACTCGCGATCCTTTACCTTTGGGATCTAATTTTT
                      ____________________________________________________________
consensus             GTTTTTTTCTCTTGGCCTCGTTTGCAACTCGCGATCCTTTACCTTTGGGATCTAATTTTT
 
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JMSF041K19+           CCCTCACTAGCCTTCTCTCTTGTTGGGGCGTGCTTAGCCTCGTCAGAGGTGGGTTTCCCC
JMSF041P11+           CCCTCACTAGCCTTCTCTCTTGTTGGGGCGTGCTTAGCCTCGTCAGAGGTGGGTTTCCCC
                      ____________________________________________________________
consensus             CCCTCACTAGCCTTCTCTCTTGTTGGGGCGTGCTTAGCCTCGTCAGAGGTGGGTTTCCCC