Contig 006664:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF041P01+                                                         GGAAAGGAAGCTG
JMSF041P01-                                                          GGAAAGGAAGCTG
                      ____________________________________________________________
consensus                                                            GGAAAGGAAGCTG
 
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rJMSF041P01+          TCAAGATTGCACATTCACCATAGACGAAATTGAGAGCTCAAGCGACAACTAGTTGAAGAG
JMSF041P01-           TCAAGATTGCACATTCACCATAGACGAAATTGAGAGCTCAAGCGACAACTAGTTGAAGAG
                      ____________________________________________________________
consensus             TCAAGATTGCACATTCACCATAGACGAAATTGAGAGCTCAAGCGACAACTAGTTGAAGAG
 
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rJMSF041P01+          GTGGGTAAGACTACACAACCGGGAGCTATGGCGGACGGGCCTCAAAAAGAAATCAACGGC
JMSF041P01-           GTGGGTAAGACTACACAACCGGGAGCTATGGCGGACGGGCCTCAAAAAGAAATCAACGGC
                      ____________________________________________________________
consensus             GTGGGTAAGACTACACAACCGGGAGCTATGGCGGACGGGCCTCAAAAAGAAATCAACGGC
 
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rJMSF041P01+          GTTCATCTGTTGAGGCAACGAGTAGACTCCGGCGACTCGCTTCGACTCCGTTGGAGTGCG
JMSF041P01-           GTTCATCTGTTGAGGCAACGAGTAGACTCCGGCGACTCGCTTCGACTCCGTTGGAGTGCG
                      ____________________________________________________________
consensus             GTTCATCTGTTGAGGCAACGAGTAGACTCCGGCGACTCGCTTCGACTCCGTTGGAGTGCG
 
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rJMSF041P01+          CCGGTGGGTGAGGGCGGCAAATACAGTGCGGGAACAATGGGCGAAGAACAAGAAATCCAA
JMSF041P01-           CCGGTGGGTGAGGGCGGCAAATACAGTGCGGGAACAATGGGCGAAGAACAAGAAATCCAA
                      ____________________________________________________________
consensus             CCGGTGGGTGAGGGCGGCAAATACAGTGCGGGAACAATGGGCGAAGAACAAGAAATCCAA
 
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rJMSF041P01+          GAAATCTAAGAAGCAACATGTTGAGATTACGGACAGCCATAACACAGATGATGACTTCGT
JMSF041P01-           GAAATCTAAGAAGCAACATGTTGAGATTACGGACAGCCATAACACAGATGATGACTTCGT
                      ____________________________________________________________
consensus             GAAATCTAAGAAGCAACATGTTGAGATTACGGACAGCCATAACACAGATGATGACTTCGT
 
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rJMSF041P01+          TGATCCTCCGGTTCAAGAAACAAGTACACAGGATAACCAAGACTGTTTGTTTCTGTGCCG
JMSF041P01-           TGATCCTCCGGTTCAAGAAACAAGTACACAGGATAACCAAGACTGTTTGTTTCTGTGCCG
                      ____________________________________________________________
consensus             TGATCCTCCGGTTCAAGAAACAAGTACACAGGATAACCAAGACTGTTTGTTTCTGTGCCG
 
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rJMSF041P01+          TTATGTTTTGTAAAGTATGCATTTGTGGGTGTATTGTATGTTAGTGAAAGTGTGCATCAG
JMSF041P01-           TTATGTTTTGTAAAGTATGCATTTGTGGGTGTATTGTATGTTAGTGAAAGTGTGCATCAG
                      ____________________________________________________________
consensus             TTATGTTTTGTAAAGTATGCATTTGTGGGTGTATTGTATGTTAGTGAAAGTGTGCATCAG
 
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rJMSF041P01+          GTAATATTATTTCAGTGCAATTTTGAATGTTTATAATGTGCATAGTAGAGGTTTGTGGAA
JMSF041P01-           GTAATATTATTTCAGTGCAATTTTGAATGTTTATAATGTGCATAGTAGAGGTTTGTGGAA
                      ____________________________________________________________
consensus             GTAATATTATTTCAGTGCAATTTTGAATGTTTATAATGTGCATAGTAGAGGTTTGTGGAA
 
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rJMSF041P01+          AATACTGCCATGACAGAATTCTCATTTGCAGGCGTGTGCACTTTGGTTTTAGTGCGCTGC
JMSF041P01-           AATACTGCCATGACAGAATTCTCATTTGCAGGCGTGTGCACTTTGGTTTTAGTGCGCTGC
                      ____________________________________________________________
consensus             AATACTGCCATGACAGAATTCTCATTTGCAGGCGTGTGCACTTTGGTTTTAGTGCGCTGC
 
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rJMSF041P01+          CCAATCACGA                                                  
JMSF041P01-           CCAATCACGATACTTGAACATCTGTCGGAATGCAATAAAACTTCAATCACAAAAAAAAAA
                      ____________________________________________________________
consensus             CCAATCACGATACTTGAACATCTGTCGGAATGCAATAAAACTTCAATCACAAAAAAAAAA