| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015O10 | Sequence | 508 | 006662 (11) | emb|CDP05070.1| | 8e-22 | unnamed protein product [Coffea canephora] | 740 | 006662 (11) | ref|XP_011075994.1| | 8e-102 | PREDICTED: protein BOBBER 1 [Sesamum indicum] |
| JMFF028P21 | Sequence | 516 | 006662 (11) | emb|CDP05070.1| | 2e-23 | unnamed protein product [Coffea canephora] | 349 | 006662 (11) | ref|XP_004234959.1| | 5e-33 | PREDICTED: protein BOBBER 1 [Solanum lycopersicum] |
| JMFF030M24 | Sequence | 437 | 006662 (11) | ref|XP_009601406.1| | 2e-17 | PREDICTED: protein BOBBER 1-like [Nicotiana tomentosiformis] | 730 | 006662 (11) | ref|XP_011075994.1| | 4e-91 | PREDICTED: protein BOBBER 1 [Sesamum indicum] |
| JMFF035F13 | Sequence | 606 | 006662 (11) | emb|CDP05070.1| | 8e-43 | unnamed protein product [Coffea canephora] | 692 | 006662 (11) | ref|XP_011075994.1| | 4e-92 | PREDICTED: protein BOBBER 1 [Sesamum indicum] |
| JMFN005D19 | Sequence | 585 | 006662 (11) | emb|CDP05070.1| | 4e-32 | unnamed protein product [Coffea canephora] | |||||
| JMSF041H12 | Sequence | 746 | 006662 (11) | ref|XP_009601406.1| | 5e-59 | PREDICTED: protein BOBBER 1-like [Nicotiana tomentosiformis] | 716 | 006662 (11) | ref|XP_011075994.1| | 6e-105 | PREDICTED: protein BOBBER 1 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMFF035F13- AATATAATTCCAC
rJMFF030M24- ACCTAGTCATTCAATATAATTCCAC
rJMFF015O10- AATATAATTCCAC
____________________________________________________________
consensus ACCTAGTCATTCAATATAATTCCAC
. : . : . : . : . : . :
rJMFF035F13- TAACATATCAGCAGTTCAAAATTTCCATCGAATAAAATGTCAACAAACAAATTGAGCATA
rJMFF030M24- TAACATATCAGCAGTTCAAAATTTCCATCGAATAAAATGTCAACAAACAAATTGAGCATA
rJMFF015O10- TAACATATCAGCAGTTCAAAATTTCCATCGAATAAAATGTCAACAAACAAATTGAGCATA
rJMSF041H12- GTCAACAAACAAATTGAGCATA
____________________________________________________________
consensus TAACATATCAGCAGTTCAAAATTTCCATCGAATAAAATGTCAACAAACAAATTGAGCATA
. : . : . : . : . : . :
rJMFF035F13- TGCACTACAAAACTCCAAGAAAAAACATATCCACAGTGAAGAAAATGGTTTTTAGCCCAA
rJMFF030M24- TGCACTACAAAACTCCAAGAAAAAACATATCCACAGTGAAGAAAATGGTTTTTAGCCCAA
rJMFF015O10- TGCACTACAAAACTCCAAGAAAAAACATATCCACAGTGAAGAAAATGGTTTTTAGCCCAA
rJMFF028P21- AAGAAAAAACATATCCACAGTGAAGAAAATGGTTTTTAGCCCAA
rJMSF041H12- TGCACTACAAAACTCCAAGAAAAAACATATCCACAGTGAAGAAAATGGTTTTTAGCCCAA
____________________________________________________________
consensus TGCACTACAAAACTCCAAGAAAAAACATATCCACAGTGAAGAAAATGGTTTTTAGCCCAA
. : . : . : . : . : . :
rJMFF035F13- AACAAAAAACGCAAT-CTATACTACTACTAGGCACCACCACCGCTAAACTTGACCTTAGA
rJMFF030M24- AACAAAAAACGCAAT-CTATACTACTACTAGGCACCACCACCGCTAAACTTGACCTTAGA
rJMFF015O10- AACAAAAAACGCAAT-CTATACTACTACTAGGCACCACCACCGCTAAACTTGACCTTAGA
rJMFF028P21- AACAAAAAACGCAATCCTATACTACTACTAGGCACCACCACCGCTAAACTTGACCTTAGA
rJMSF041H12- AACAAAAAACGCAAT-CTATACTACTACTAGGCACCACCACCGCTAAACTTGACCTTAGA
____________________________________________________________
consensus AACAAAAAACGCAAT-CTATACTACTACTAGGCACCACCACCGCTAAACTTGACCTTAGA
. : . : . : . : . : . :
rJMFF035F13- AAAGTCCACCACCAACCACCACCAAAACCAAAATAAGCACTCAGCTAAACTTGGCCTTGG
rJMFF030M24- AAAGTCCACCACCAACCACCACCAAAACCAAAATAAGCACTCAGCTAAACTTGGCCTTGG
rJMFF015O10- AAAGTCCACCACCAACCACCACCAAAACCAAAATAAGCACTCAGCTAAACTTGGCCTTGG
rJMFF028P21- AAAGTCCACCACCAACCACCACCAAAACCAAAATAAGCACTCAGCTAAACTTGGCCTTGG
rJMSF041H12- AAAGTCCACCACCAACCACCACCAAAACCAAAATAAGCACTCAGCTAAACTTGGCCTTGG
____________________________________________________________
consensus AAAGTCCACCACCAACCACCACCAAAACCAAAATAAGCACTCAGCTAAACTTGGCCTTGG
. : . : . : . : . : . :
rJMFF035F13- AAAAGTCCATTTCTGGATGCTCAGCCATGAATTTCTTCAGGATATCTTGTTTCTGCACTT
rJMFF030M24- AAAAGTCCATTTCTGGATGCTCAGCCATGAATTTCTTCAGGATATCTTGTTTCTGCACTT
rJMFF015O10- AAAAGTCCATTTCTGGATGCTCAGCCATGAATTTCTTCAGGATATCTTGTTTCTGCACTT
rJMFF028P21- AAAAGTCCATTTCTGGATGCTCAGCCATGAATTTCTTCAGGATATCTTGTTTCTGCACTT
rJMSF041H12- AAAAGTCCATTTCTGGATGCTCAGCCATGAATTTCTTCAGGATATCTTGTTTCTGCACTT
____________________________________________________________
consensus AAAAGTCCATTTCTGGATGCTCAGCCATGAATTTCTTCAGGATATCTTGTTTCTGCACTT
. : . : . : . : . : . :
rJMFF035F13- CGTCACTTGTAGGAAGACCCATGGATTTCTGTCGCTGATCAAACATCATTTTTTCCACTG
rJMFF030M24- CGTCACTTGTAGGAAGACCCATGGATTTCTGTCGCTGATCAAACATCATTTTTTCCACTG
rJMFF015O10- CGTCACTTGTAGGAAGACCCATGGATTTCTGTCGCTGATCAAACATCATTTTTTCCACTG
rJMFF028P21- CGTCACTTGTAGGAAGACCCATGGATTTCTGTCGCTGATCAAACATCATTTTTTCCACTG
rJMSF041H12- CGTCACTTGTAGGAAGACCCATGGATTTCTGTCGCTGATCAAACATCATTTTTTCCACTG
____________________________________________________________
consensus CGTCACTTGTAGGAAGACCCATGGATTTCTGTCGCTGATCAAACATCATTTTTTCCACTG
. : . : . : . : . : . :
rJMFF035F13- TTGACCTTGTCTCAGGGTCTAGATCCGATAGTTTACTGCTTTCTGGTTCTACCTTCTGGG
rJMFF030M24- TTGACCTTGTCTCAGGGTCTAGATCCGATAGTTTACTGCTTTCTGGTTCTACCTTCTGGG
rJMFF015O10- TTGACCTTGTCTCAGGGTCTAGATCCGATAGTTTACTGCTTTCTGGTTCTACCTTCTGGG
rJMFF028P21- TTGACCTTGTCTCAGGGTCTAGATCCGATAGTTTACTGCTTTCTGGTTCTACCTTCTGGG
rJMSF041H12- TTGACCTTGTCTCAGGGTCTAGATCCGATAGTTTACTGCTTTCTGGTTCTACCTTCTGGG
____________________________________________________________
consensus TTGACCTTGTCTCAGGGTCTAGATCCGATAGTTTACTGCTTTCTGGTTCTACCTTCTGGG
. : . : . : . : . : . :
rJMFF035F13- TATCAATTTCAGGCTCACCCTTCACCAAAAATTTCCACCATTCCATTTGATCACTCTTGG
rJMFF030M24- TATCAATTTCAGGCTCACCCTTCACCAAAAATTTCCACCATTCCATTTGATCACTCTTGG
rJMFF015O10- TATCAATTTCAGGCTCACCCTTCACCAAAAATTTCCACCATTCCATTTGATCACTCTTGG
rJMFF028P21- TATCA
rJMSF041H12- TATCAATTTCAGGCTCACCCTTCACCAAAAATTTCCACCATTCCATTTGATCACTCTTGG
____________________________________________________________
consensus TATCAATTTCAGGCTCACCCTTCACCAAAAATTTCCACCATTCCATTTGATCACTCTTGG
. : . : . : . : . : . :
rJMFF035F13- TTAGGAGCACAGAGATGGATTTTTGGTCCTCCAGGCTCCAAAAGCAATCATCAACCTTGA
rJMFF030M24- TTAGGAGCACAGAGATGGATTTTTGGTCCTCCAGGCTCCAAAAGCAATCATCAACCTTGA
rJMFF015O10- TTAGGAGCACAGAGATGGATTTTTGGTCCTCCAGGCTCCAAAAGCAATCATCAACCTTGA
rJMSF041H12- TTAGGAGCACAGAGATGGATTTTTGGTCCTCCAGGCTCCAAAAGCAATCATCAACCTTGA
JMSF041H12+ GGCTCCAAAAGCAATCATCAACCTTGA
____________________________________________________________
consensus TTAGGAGCACAGAGATGGATTTTTGGTCCTCCAGGCTCCAAAAGCAATCATCAACCTTGA
. : . : . : . : . : . :
rJMFF035F13- CAGGCTTGTAGAGTTCAGCATCAATTACTGGTGGCTGACCCTTAAGTCCAACTTTAAGAT
rJMFF030M24- CAGGCTTGTAGAGTTCAGCATCAATTACTGGTGGCTGACCCTTAAGTCCAACTTTAAGAT
rJMFF015O10- CAGGCTTGTAGAGTTCAGCATCAATTACTGGTGGCTGACCCTTAAGTCCAACTTTAAGAT
rJMSF041H12- CAGGCTTGTAGAGTTCAGCATCAATTACTGGTGGCTGACCCTTAAGTCCAACTTTAAGAT
JMFF035F13+ TCCAACTTTAAGAT
JMFN005D19+ CCTTAAGTCCAACTTAAGGAT
JMSF041H12+ CAGGCTTGTAGAGTTCAGCATCAATTACTGGTGGCTGACCCTTAAGTCCAACTTTAAGAT
____________________________________________________________
consensus CAGGCTTGTAGAGTTCAGCATCAATTACTGGTGGCTGACCCTTAAGTCCAACTTTAAGAT
. : . : . : . : . : . :
rJMFF035F13- GGTTCTTTTTTATATTACATTCGATAAACCTAGACTTTGTTCCAGGAGGTACTGGAATAG
rJMFF030M24- GGTTCTTTTTTATATTACATTCGATAAACCTAGACTTTGTTCCAGGAGGTACTGGAATAG
rJMFF015O10- GGTTCTTTTTTATATTACATTCGATAAACCTAGACTTTGTTCCAGGANGTACTGGAATAG
rJMSF041H12- GGTTCTTTTTTATATTACATTCGATAAACCTAGACTTTGTTCCAGGAGGTACTGGAATAG
JMFF035F13+ GGTTCTTTTTTATATTACATTCGATAAACCTAGACTTTGTTCCAGGAGGTACTGGAATAG
JMFN005D19+ GGTTCTTTTTTATATTACATTCGATAAACCTAGAC-TTGTTCCAGGAGGTACTGGAATAG
JMSF041H12+ GGTTCTTTTTTATATTACATTCGATAAACCTAGACTTTGTTCCAGGAGGTACTGGAATAG
____________________________________________________________
consensus GGTTCTTTTTTATATTACATTCGATAAACCTAGACTTTGTTCCAGGAGGTACTGGAATAG
. : . : . : . : . : . :
rJMFF035F13- TGATAGTGACCTCCTGAAGG
rJMFF030M24- TGATAGTGACCTCCTGNAAGGCTTTGAACCCAAGAGTAATTATCCA
rJMFF015O10- TGATAGTGACCTCCTG-AANGCTTTGAACCCAAGAGTAATTATCCATATCAAGGCCATTT
rJMSF041H12- TGATAGTGACCTCCTG-AAGGCTTTGAACCCAAGAGTAATTATCCATATCAAGGCCATTT
JMFF028P21+ AAGGCTTTGAACCCAAGAGTAATTATCCATATCAAGGCCATTT
JMFF015O10+ GAACCCAAGAGTAATTATCCATATCAAGGCCATTT
JMFF035F13+ TGATAGTGACCTCCTG-AAGGCTTTGAACCCAAGAGTAATTATCCATATCAAGGCCATTT
JMFN005D19+ TGATAGTGACCTCCTG-AAGGCTTTGAACCCAAGAGTAATTATCCATATCAAGGCCATTT
JMSF041H12+ TGATAGTGACCTCCTG-AAGGCTTTGAACCCAAGAGTAATTATCCATATCAAGGCCATTT
____________________________________________________________
consensus TGATAGTGACCTCCTG-AAGGCTTTGAACCCAAGAGTAATTATCCATATCAAGGCCATTT
. : . : . : . : . : . :
rJMFF015O10- CCTTTGTTA
rJMSF041H12- CCTTTGTTAGG
JMFF028P21+ CCTTTGTTAGGAGCTCGAGGTCCCTTTTTGTCACCCTCCGTAGTTCCCTCCGTAGTTCCG
JMFF015O10+ CCTTTGTTAGGAGCTCGAGGTCCCTTTTTGTCACCCTCCGTAGTTCCCTCCGTAGTTCCG
JMFF030M24+ TCCGTAGTTCCCTCCGTAGTTCCG
JMFF035F13+ CCTTTGTTAGGAGCTCGAGGTCCCTTTTTGTCACCCTCCGTAGTTCCCTCCGTAGTTCCG
JMFN005D19+ CCTTTGTTAGGAGCTCGAGGTCCCTTTTTGTCACCCTCCGTAGTTCCCTCCGTAGTTCCG
JMSF041H12+ CCTTTGTTAGGAGCTCGAGGTCCCTTTTTGTCACCCTCCGTAGTTCCCTCCGTAGTTCCG
____________________________________________________________
consensus CCTTTGTTAGGAGCTCGAGGTCCCTTTTTGTCACCCTCCGTAGTTCCCTCCGTAGTTCCG
. : . : . : . : . : . :
JMFF028P21+ GTAGTCTTATCAGCCTCAGCTTCCACCTCCTTCACCGGAACAGCAGGTGCGGCGGCGGCG
JMFF015O10+ GTAGTCTTATCAGCCTCAGCTTCCACCTCCTTCACCGGAACAGCAGGTGCGGCGGCGGCG
JMFF030M24+ GTAGTCTTATCAGCCTCAGCTTCCACCTCCTTCACCGGAACAGCAGGTGCGGCGGCGGCG
JMFF035F13+ GTAGTCTTATCAGCCTCAGCTTCCACCTCCTTCACCGGAACAGCAGGTGCGGCGGCGGCG
JMFN005D19+ GTAGTCTTATCAGCCTCAGCTTCCACCTCCTTCACCGGAACAGCAGGTGCGGCGGCGGCG
JMSF041H12+ GTAGTCTTATCAGCCTCAGCTTCCACCTCCTTCACCGGAACAGCAGGTGCGGCGGCGGCG
____________________________________________________________
consensus GTAGTCTTATCAGCCTCAGCTTCCACCTCCTTCACCGGAACAGCAGGTGCGGCGGCGGCG
. : . : . : . : . : . :
JMFF028P21+ GCGATCGGCGGCTCCTTCATCTTCTTCTCAATGTTCCCATTCGCGGCCTTCTCTTTCTCC
JMFF015O10+ GCGATCGGCGGCTCCTTCATCTTCTTCTCAATGTTCCCATTCGCGGCCTTCTCTTTCTCC
JMFF030M24+ GCGATCGGCGGCTCCTTCATCTTCTTCTCAATGTTCCCATTCGCGGCCTTCTCTTTCTCC
JMFF035F13+ GCGATCGGCGGCTCCTTCATCTTCTTCTCAATGTTCCCATTCGCGGCCTTCTCTTTCTCC
JMFN005D19+ GCGATCGGCGGCTCCTTCATCTTCTTCTCAATGTTCCCATTCGCGGCCTTCTCTTTCTCC
JMSF041H12+ GCGATCGGCGGCTCCTTCATCTTCTTCTCAATGTTCCCATTCGCGGCCTTCTCTTTCTCC
____________________________________________________________
consensus GCGATCGGCGGCTCCTTCATCTTCTTCTCAATGTTCCCATTCGCGGCCTTCTCTTTCTCC
. : . : . : . : . : . :
JMFF028P21+ TTCCGCTTTCGGTCCTCGGTGTCGACCTTGTCCTTGACCATCCGAACCACCGCATTCACA
JMFF015O10+ TTCCGCTTTCGGTCCTCGGTGTCGACCTTGTCCTTGACCATCCGAACCACCGCATTCACA
JMFF030M24+ TTCCGCTTTCGGTCCTCGGTGTCGACCTTGTCCTTGACCATCCGAACCACCGCATTCACA
JMFF035F13+ TTCCGCTTTCGGTCCTCGGTGTCGACCTTGTCCTTGACCATCCGAACCACCGCATTCACA
JMFN005D19+ TTCCGCTTTCGGTCCTCGGTGTCGACCTTGTCCTTGACCATCCGAACCACCGCATTCACA
JMSF041H12+ TTCCGCTTTCGGTCCTCGGTGTCGACCTTGTCCTTGACCATCCGAACCACCGCATTCACA
____________________________________________________________
consensus TTCCGCTTTCGGTCCTCGGTGTCGACCTTGTCCTTGACCATCCGAACCACCGCATTCACA
. : . : . : . : . : . :
JMFF028P21+ TCGTTGATCAACGAATCGCTGTTGAACAAATCAGACTCGCGCGCCAGGAACTCCAACGCC
JMFF015O10+ TCGTTGATCAACGAATCGCTGTTGAACAAATCAGACTCGCGCGCCAGGAACTCCAACGCC
JMFF030M24+ TCGTTGATCAACGAATCGCTGTTGAACAAATCAGACTCGCGCGCCAGGAACTCCAACGCC
JMFF035F13+ TCGTTGATCAACGAATCGCTGTTGAACAAATCAGACTCGCGCGCCAGGAACTCCAACGCC
JMFN005D19+ TCGTTGATCAACGAATCGCTGTTGAACAAATCAGACTCGCGCGCCAGGAACTCCAACGCC
JMSF041H12+ TCGTTGATCAACGAATCGCTGTTGAACAAATCAGACTCGCGCGCCAGGAACTCCAACGCC
____________________________________________________________
consensus TCGTTGATCAACGAATCGCTGTTGAACAAATCAGACTCGCGCGCCAGGAACTCCAACGCC
. : . : . : . : . : . :
JMFF028P21+ GTCTCGAGAAATCCAAGCGGATTAGCTGGATCAAGAGAGGCCTTAAACGGCTTCGCTGCG
JMFF015O10+ GTCTCGAGAAATCCAAGCGGATTAGCTGGATCAAGAGAGGCCTTAAACGGCTTCGCTGCG
JMFF030M24+ GTCTCGAGAAATCCAAGCGGATTAGCTGGATCAAGAGAGGCCTTAAACGGCTTCGCTGCG
JMFF035F13+ GTCTCGAGAAATCCAAGCGGATTAGCTGGATCAAGAGAGGCCTTAAACGGCTTCGCTGCG
JMFN005D19+ GTCTCGAGAAATCCAAGCGGATTAGCTGGATCAAGAGAGGCCTTAAACGGCTTCGCTGCG
JMSF041H12+ GTCTCGAGAAATCCAAGCGGATTAGCTGGATCAAGAGAGGCCTTAAACGGCTTCGCTGCG
____________________________________________________________
consensus GTCTCGAGAAATCCAAGCGGATTAGCTGGATCAAGAGAGGCCTTAAACGGCTTCGCTGCG
. : . : . : . : . : . :
JMFF028P21+ GCAGCTGAAGAAGTAGACGTATTAGTTTCCGGCTCCTCGTACTCGGAAAGAATTGCCATG
JMFF015O10+ GCAGCTGAAGAAGTAGACGTATTAGTTTCCGGCTCCTCGTACTCGGAAAGAATTGCCATG
JMFF030M24+ GCAGCTGAAGAAGTAGACGTATTAGTTTCCGGCTCCTCGTACTCGGAAAGAATTGCCATG
JMFF035F13+ GCAGCTGAAGAAGTAGACGTATTAGTTTCCGGCTCCTCGTACTCGGAAAGAATTGCCATG
JMFN005D19+ GCAGCTGAAGAAGTAGACGTATTAGTTTCCGGCTCCTCGTACTCGGAAAGAATTGCCATG
JMSF041H12+ GCAGCTGAAGAAGTAGACGTATTAGTTTCCGGCTCCTCGTACTCGGAAAGAATTGCCATG
____________________________________________________________
consensus GCAGCTGAAGAAGTAGACGTATTAGTTTCCGGCTCCTCGTACTCGGAAAGAATTGCCATG
. : . : . : . : . : . :
JMFF028P21+ GAATCTGTAGCAAGTACTGAGTCTAGGGTTTTGCGTGGTTTGAAAGAGGACTT
JMFF015O10+ GAATCTGTAGCAAGTACTGAGTCTAGGGTTTTGCGTGGTTTGAAAGAGGACTT
JMFF030M24+ GAATCTGTAGCAAGTACTGAGTCTAGGGTTTTGCGTGGTTTGAAAGAGGACTT
JMFF035F13+ GAATCTGTAGCAAGTACTGAGTCTAGGGTTTTGCGTGGTTTGAAAGAGGACTT
JMFN005D19+ GAATCTGTAGCAAGTACTGAGTCTAG
JMSF041H12+ GAATCTGTAGCAAGTACTGAGTCTAGGGTTTTGCGTGGTTTGAAAGAGGACTTGAAGGAA
____________________________________________________________
consensus GAATCTGTAGCAAGTACTGAGTCTAGGGTTTTGCGTGGTTTGAAAGAGGACTTGAAGGAA
. : . : . : . : . : . :
JMSF041H12+ GTATGTAAAGTGTCAAATATGAAGAGTATATGGAGAATTCCAGAAGATCACAAACCGCTC
____________________________________________________________
consensus GTATGTAAAGTGTCAAATATGAAGAGTATATGGAGAATTCCAGAAGATCACAAACCGCTC