clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF020M11 | Sequence | 505 | 006661 (3) | ref|XP_010032541.1| | 3e-54 | PREDICTED: serine carboxypeptidase-like 25 [Eucalyptus grandis] gb|KCW51926.1| h | 632 | 008218 (3) | ref|XP_009771074.1| | 2e-104 | PREDICTED: serine carboxypeptidase-like 25 [Nicotiana sylvestris] |
JMSF041D15 | Sequence | 778 | 006661 (3) | ref|XP_009771074.1| | 5e-116 | PREDICTED: serine carboxypeptidase-like 25 [Nicotiana sylvestris] | 666 | 008218 (3) | ref|XP_009771074.1| | 2e-127 | PREDICTED: serine carboxypeptidase-like 25 [Nicotiana sylvestris] |
JMSF041G15 | Sequence | 800 | 006661 (3) | ref|XP_009771074.1| | 2e-120 | PREDICTED: serine carboxypeptidase-like 25 [Nicotiana sylvestris] | 638 | 008218 (3) | ref|XP_009596929.1| | 6e-120 | PREDICTED: serine carboxypeptidase-like 25 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF041D15+ T
JMSF041G15+ TACGTCACCGTTCCCAGGTT
____________________________________________________________
consensus TACGTCACCGTTCCCAGGTT
. : . : . : . : . : . :
JMSF041D15+ GTCGTGGTAGTTGTCGGTAANTGCGTTCCCCACCATGAACCCTTTAATCTTGATCGGATT
JMSF041G15+ GTCGTGGTAGTTGTCGGTAACTGCGTTCCCCACCATGAACCCTTTAATCTTGATCGGATT
____________________________________________________________
consensus GTCGTGGTAGTTGTCGGTAACTGCGTTCCCCACCATGAACCCTTTAATCTTGATCGGATT
. : . : . : . : . : . :
JMSF041D15+ CTTGGAATGCGCGTTATAGTGCACAATCTCTCTGGCGAGCTGAGGAACATAATGCCCGGC
JMSF041G15+ CTTGGAATGCGCGTTATAGTGCACAATCTCTCTGGCGAGCTGAGGAACATAATGCCCGGC
____________________________________________________________
consensus CTTGGAATGCGCGTTATAGTGCACAATCTCTCTGGCGAGCTGAGGAACATAATGCCCGGC
. : . : . : . : . : . :
JMSF041D15+ GTAGCTCTCGCCGGTCAGATACACATCCCGGCCTTTGTACGACGGGAATCGGTCCATCCA
JMSF041G15+ GTAGCTCTCGCCGGTCAGATACACATCCCGGCCTTTGTACGACGGGAATCGGTCCATCCA
____________________________________________________________
consensus GTAGCTCTCGCCGGTCAGATACACATCCCGGCCTTTGTACGACGGGAATCGGTCCATCCA
. : . : . : . : . : . :
JMSF041D15+ TCTTATTAGAAACTGCAACGAGTCCTTTGCAGTGCGATGATCTCCGGTGTCGAGGAGATC
JMSF041G15+ TCTTATTAGAAACTGCAACGAGTCCTTTGCAGTGCGATGATCTCCGGTGTCGAGGAGATC
____________________________________________________________
consensus TCTTATTAGAAACTGCAACGAGTCCTTTGCAGTGCGATGATCTCCGGTGTCGAGGAGATC
. : . : . : . : . : . :
JMSF041D15+ AGAAGATCGGTTAGTATAAGAGAAACCGACACCGGCCGGGGTTTCGAGGAAGAGCAAGTT
JMFF020M11+ GGCCGGGGCTTCGAGGAAGAGCAAGTT
JMSF041G15+ AGAAGATCGGTTAGTATAAGAGAAACCGACACCGGCCGGGGTTTCGAGGAAGAGCAAGTT
____________________________________________________________
consensus AGAAGATCGGTTAGTATAAGAGAAACCGACACCGGCCGGGGTTTCGAGGAAGAGCAAGTT
. : . : . : . : . : . :
JMSF041D15+ GACCTCCGTATTCCATGAGAATTTGTTGAGGTAAAGCCCAGAGGCGGTTTTGTTTATCCT
JMFF020M11+ GACCTCCGTATTCCATGAGAATTTGTTGAGGTAAAGCCCAGAGGCGGTTTTGTTTATCCT
JMSF041G15+ GACCTCCGTATTCCATGAGAATTTGTTGAGGTAAAGCCCAGAGGCGGTTTTGTTTATCCT
____________________________________________________________
consensus GACCTCCGTATTCCATGAGAATTTGTTGAGGTAAAGCCCAGAGGCGGTTTTGTTTATCCT
. : . : . : . : . : . :
JMSF041D15+ AAACGGTCCGATTTCTTCGGATGCACCGTAGGCCACGGAGGAGCAACCCGGACCTCCATT
JMFF020M11+ AAACGGTCCGATTTCTTCGGATGCACCGTAGGCCACGGAGGAGCAACCCGGACCTCCATT
JMSF041G15+ AAACGGTCCGATTTCTTCGGATGCACCGTAGGCCACGGAGGAGCAACCCGGACCTCCATT
____________________________________________________________
consensus AAACGGTCCGATTTCTTCGGATGCACCGTAGGCCACGGAGGAGCAACCCGGACCTCCATT
. : . : . : . : . : . :
JMSF041D15+ GAGCCAAACGACGAGCGGTTTGGACAGGGGCTGAGACTGGGCTTCCGTCAGCCAGTAAAA
JMFF020M11+ GAGCCAAACGACGAGCGGTTTGGACAGGGGCTGAGACTGGGCTTCCGTCAGCCAGTAAAA
JMSF041G15+ GAGCCAAACGACGAGCGGTTTGGACAGGGGCTGAGACTGGGCTTCCGTCAGCCAGTAAAA
____________________________________________________________
consensus GAGCCAAACGACGAGCGGTTTGGACAGGGGCTGAGACTGGGCTTCCGTCAGCCAGTAAAA
. : . : . : . : . : . :
JMSF041D15+ CAGCGCGCGGCCGGCGGTTTCGTCGACGGTGACGTACCCGGAGTACTGCCGGAACGCCAC
JMFF020M11+ CAGCGCGCGGCCGGCGGTTTCGTCGACGGTGACGTACCCGGAGTACTGCCGGAACGCCAC
JMSF041G15+ CAGCGCGCGGCCGGCGGTTTCGTCGACGGTGACGTACCCGGAGTACTGCCGGAACGCCAC
____________________________________________________________
consensus CAGCGCGCGGCCGGCGGTTTCGTCGACGGTGACGTACCCGGAGTACTGCCGGAACGCCAC
. : . : . : . : . : . :
JMSF041D15+ CTTGGGCTGTCCGGGGAGCGACACTATCCTGTCCGCTTCGGCGGTGGCGGCGGCAGCTCT
JMFF020M11+ CTTGGGCTGTCCGGGGAGCGACACTATCCTGTCCGCTTCGGCGGTGGCGGCGGCAGCTCT
JMSF041G15+ CTTGGGCTGTCCGGGGAGCGACACTATCCTGTCCGCTTCGGCGGTGGCGGCGGCAGCTCT
____________________________________________________________
consensus CTTGGGCTGTCCGGGGAGCGACACTATCCTGTCCGCTTCGGCGGTGGCGGCGGCAGCTCT
. : . : . : . : . : . :
JMSF041D15+ GCCGCCGGTAATATGGAGGAGGAGGAGTAGAGCAGTGACGACGGAAAGACGATACATAAG
JMFF020M11+ GCCGCCGGTAATATGGAGGAGGAGGAGTAGAGCAGTGACGACGGAAAGACGATACATAAG
JMSF041G15+ GCCGCCGGTAATATGGAGGAGGAGGAGTAGAGCAGTGACGACGGAAAGACGATACATAAG
____________________________________________________________
consensus GCCGCCGGTAATATGGAGGAGGAGGAGTAGAGCAGTGACGACGGAAAGACGATACATAAG
. : . : . : . : . : . :
JMSF041D15+ AGACGGCATGGAAGGCGGAGGTGTTGTCCCTACGGCGGCCATGGGTTTCATGGCGAATTA
JMFF020M11+ AGACGGCATGGAAGGCGGAGGTGTTGTCCCTACGGCGGCCATGGGTTTCATGGCGAATTA
JMSF041G15+ AGACGGCATGGAAGGCGGAGGTGTTGTCCCTACGGCGGCCATGGGTTTCATGGCGAATTA
____________________________________________________________
consensus AGACGGCATGGAAGGCGGAGGTGTTGTCCCTACGGCGGCCATGGGTTTCATGGCGAATTA
. : . : . : . : . : . :
JMSF041D15+ AAGAATTGAAACGCAGTAGTTAGGTTGGTGCAAGCTGGCTGGGGGATACTGTCTTT
JMFF020M11+ AAGAATTGAAACGCAGTAGTTAGGTTGGTGCAAGCTGGCTGGGGGATACTGTCTTT
JMSF041G15+ AAGAATTGAAACGCAGTAGTTAGGTTGGTGCAAGCTGGCTGGGGGATACTGTCTTTACCC
____________________________________________________________
consensus AAGAATTGAAACGCAGTAGTTAGGTTGGTGCAAGCTGGCTGGGGGATACTGTCTTTACCC