Contig 006659:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS022C09+                                                                   GATC
                      ____________________________________________________________
consensus                                                                     GATC
 
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JMFS022C09+           AATTTCATCATCATCCATAGAAGCATCATTACCACCATTCTGTGAAATTTTTAAATCAGG
                      ____________________________________________________________
consensus             AATTTCATCATCATCCATAGAAGCATCATTACCACCATTCTGTGAAATTTTTAAATCAGG
 
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JMFS022C09+           TACATCATTGGAACTTACAGAGCCAACTCCATCCACATCCAAAGGCTTAGCAAGTCCATC
                      ____________________________________________________________
consensus             TACATCATTGGAACTTACAGAGCCAACTCCATCCACATCCAAAGGCTTAGCAAGTCCATC
 
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JMFS022C09+           CACATCCACATCCATATCCATATCCATATCCATGCCTTGTTTTTCCTCAAGAGCAGCATC
                      ____________________________________________________________
consensus             CACATCCACATCCATATCCATATCCATATCCATGCCTTGTTTTTCCTCAAGAGCAGCATC
 
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JMFS022C09+           TTCATCATCAGATTCCCCTTCCAAAGTCCAAGTCTTGCCTGACTTGGGTTCATCAGTAAT
                      ____________________________________________________________
consensus             TTCATCATCAGATTCCCCTTCCAAAGTCCAAGTCTTGCCTGACTTGGGTTCATCAGTAAT
 
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JMFS022C09+           TGCTGCAACTCCAAGCTTTTCTCTCTCTGACTCCTCCTTCTTTCTTCTCAACTCCTGCCA
                      ____________________________________________________________
consensus             TGCTGCAACTCCAAGCTTTTCTCTCTCTGACTCCTCCTTCTTTCTTCTCAACTCCTGCCA
 
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JMFS022C09+           TTCCTGAACTCTCCTTCTTCGCTTCTCCATCTCTTCTTCCAGTTTCCTTTGTTCCTCAGC
                      ____________________________________________________________
consensus             TTCCTGAACTCTCCTTCTTCGCTTCTCCATCTCTTCTTCCAGTTTCCTTTGTTCCTCAGC
 
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JMFS022C09+           TTGTTCTTCTTCTAGATTCTTCTGTTTCTTTTCTGATGATTCTTCATCACTTCTTCTCAG
                      ____________________________________________________________
consensus             TTGTTCTTCTTCTAGATTCTTCTGTTTCTTTTCTGATGATTCTTCATCACTTCTTCTCAG
 
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JMFS022C09+           TGGGCTACCATCTTCACTGTCATCTCTGAGCTTAATAGGTTTCTTGCTTCGCTCATGATC
                      ____________________________________________________________
consensus             TGGGCTACCATCTTCACTGTCATCTCTGAGCTTAATAGGTTTCTTGCTTCGCTCATGATC
 
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JMFS022C09+           CCTGCTCTTGTGATCATTCTCTCTCTTTCGCCTCTTTCTTTCACGATCTCTTACATCAAC
JMFS029E09+                                                              TACATCAAC
                      ____________________________________________________________
consensus             CCTGCTCTTGTGATCATTCTCTCTCTTTCGCCTCTTTCTTTCACGATCTCTTACATCAAC
 
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JMFS022C09+           ATCATCATCATCATCATCACTGCTATAATCACGCCTGCGCTCTTTCTCACGACCCCTCTT
JMFS029E09+           ATCATCATCATCATCATCACTGCTATAATCACGCCTGCGCTCTTTCTCACGACCCCTCTT
                      ____________________________________________________________
consensus             ATCATCATCATCATCATCACTGCTATAATCACGCCTGCGCTCTTTCTCACGACCCCTCTT
 
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JMFS022C09+           CTCCCTACTCCTT                                               
JMCP020H05+                                               CCTCCTATCTCTCTCTCTTCTCTC
JMFS029E09+           CTCCCTACTCCTTTCCTTCTCCTCCTTATCTTTTTCCCTCCTATCTCTCTCTCTTCTCTC
                      ____________________________________________________________
consensus             CTCCCTACTCCTTTCCTTCTCCTCCTTATCTTTTTCCCTCCTATCTCTCTCTCTTCTCTC
 
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JMCP020H05+           CCTTTCCTTATCCCTCTCCTTTTCTTTCTCTCTCTCCTTTTCTCTTTCACGTTCCCTCTC
JMFS029E09+           CCTTTCCTTATCCCTCTCCTTTTCTTTCTCTCTCTCCTTTTCTCTTTCACGTTCCCTCTC
rJMSF041C02-           CTTTCCTTATCCCTCTCCTTTTCTTTCTCTCTCTCCTTTTCTCTTTCACGTTCCCTCTC
                      ____________________________________________________________
consensus             CCTTTCCTTATCCCTCTCCTTTTCTTTCTCTCTCTCCTTTTCTCTTTCACGTTCCCTCTC
 
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JMCP020H05+           CTTCTCTTTCTCTCGGTCTCGATCCCTCTCCTTCTCTCTCTCTCTT              
JMFS029E09+           CTTCTCTTTCTCTCGGTCTCGATCCCTCTCCTTCTCTTTCTCTCTTTCGCGATCCTTCTC
rJMSF041C02-          CTTCTCTTTCTCTCGGTCTCGATCCCTCTCCTTCTCTTTCTCTCTTTCGCGATCCTTCTC
                      ____________________________________________________________
consensus             CTTCTCTTTCTCTCGGTCTCGATCCCTCTCCTTCTCTTTCTCTCTTTCGCGATCCTTCTC
 
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JMFS029E09+           CTTCTCCTTCTCTTTCTCTCTCTCCCTCTCTCTGTCTTCCTTCTCCCTAGCACTCTCTCT
rJMSF041C02-          CTTCTCCTTCTCTTTCTCTCTCTCCCTCTCTCTGTCTTCCTTCTCCCTAGCACTCTCTCT
                      ____________________________________________________________
consensus             CTTCTCCTTCTCTTTCTCTCTCTCCCTCTCTCTGTCTTCCTTCTCCCTAGCACTCTCTCT
 
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JMFS029E09+           GTCAGACCTATCCTTTTCTCTGTCTTTAGAGACCTTATCTCTGCTGCTCTTTTCCCTCTC
rJMSF041C02-          GTCAGACCTATCCTTTTCTCTGTCTTTAGAGACCTTATCTCTGCTGCTCTTTTCCCTCTC
JMSF041C02+                                                             TTTCCCTCTC
                      ____________________________________________________________
consensus             GTCAGACCTATCCTTTTCTCTGTCTTTAGAGACCTTATCTCTGCTGCTCTTTTCCCTCTC
 
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JMFS029E09+           TTTCTCTTTATGCCTATCCTTGTGTTTTTCCTTTTCCCTATCTCTATTTCTCTCCCTATA
rJMSF041C02-          TTTCTCTTTATGCCTATCCTTGTGTTTTTCCTTTTCCCTATCTCTATTTCTCTCCCTATA
JMSF041C02+           TTTCTCTTTATGCCTATCCTTGTGTTTTTCCTTTTCCCTATCTCTATTTCTCTCCCTATA
                      ____________________________________________________________
consensus             TTTCTCTTTATGCCTATCCTTGTGTTTTTCCTTTTCCCTATCTCTATTTCTCTCCCTATA
 
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JMFS029E09+           CTTATCATCAGTACTCTTCTCCCTATCATGGCGGTCTTTCTTGTCACGGTAGTGTTCCCT
rJMSF041C02-          CTTATCATCAGTACTCTTCTCCCTATCATGGCGGTCTTTCTTGTCACGGTAGTGTTCCCT
JMSF041C02+           CTTATCATCAGTACTCTTCTCCCTATCATGGCGGTCTTTCTTGTCACGGTAGTGTTCCCT
                      ____________________________________________________________
consensus             CTTATCATCAGTACTCTTCTCCCTATCATGGCGGTCTTTCTTGTCACGGTAGTGTTCCCT
 
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JMFS029E09+           GTCTCTTTCCCTGTGCCTCTCTCCATTCTTCTCCTTATCACGGTCTCGGTGCTCATCTCT
rJMSF041C02-          GTCTCTTTCCCTGTGCCTCTCTCCATTCTTCTCCTTATCACGGTCTCGGTGCTCATCTCT
JMSF041C02+           GTCTCTTTCCCTGTGCCTCTCTCCATTCTTCTCCTTATCACGGTCTCGGTGCTCATCTCT
                      ____________________________________________________________
consensus             GTCTCTTTCCCTGTGCCTCTCTCCATTCTTCTCCTTATCACGGTCTCGGTGCTCATCTCT
 
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JMFS029E09+           GTCACGGTGGCTCCTCCTCCTTGGCTCT                                
rJMSF041C02-          GTCACGGTGGCTCCTCCTCCTTGGCTCTTCTACTTCCTTTTCAGAGTCCTCCCTCTTAGA
JMSF041C02+           GTCACGGTGGCTCCTCCTCCTTGGCTCTTCTACTTCCTTTTCAGAGTCCTCCCTCTTAGA
                      ____________________________________________________________
consensus             GTCACGGTGGCTCCTCCTCCTTGGCTCTTCTACTTCCTTTTCAGAGTCCTCCCTCTTAGA
 
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rJMSF041C02-          AGACTTCTGCTTTGGTTCTTCCATACTAAATCAACAAGAGAAACCAACTGACAAAACCAA
JMSF041C02+           AGACTTCTGCTTTGGTTCTTCCATACTAAATCAACAAGAGAAACCAACTGACAAAACCAA
                      ____________________________________________________________
consensus             AGACTTCTGCTTTGGTTCTTCCATACTAAATCAACAAGAGAAACCAACTGACAAAACCAA
 
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rJMSF041C02-          GTAACCCAAGTTTCACTACGAAACAACTGCAAAACCTGTCTTACCGATCTGCAGAGCAAG
JMSF041C02+           GTAACCCAAGTTTCACTACGAAACAACTGCAAAACCTGTCTTACCGATCTGCAGAGCAAG
                      ____________________________________________________________
consensus             GTAACCCAAGTTTCACTACGAAACAACTGCAAAACCTGTCTTACCGATCTGCAGAGCAAG
 
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rJMSF041C02-          CTTTTACACAAGAGCCTCAACCATTTACAAGCAACCTAAGAATTCAAACGTGAACGGAGA
JMSF041C02+           CTTTTACACAAGAGCCTCAACCATTTACAAGCAACCTAAGAATTCAAACGTGAACGGAGA
                      ____________________________________________________________
consensus             CTTTTACACAAGAGCCTCAACCATTTACAAGCAACCTAAGAATTCAAACGTGAACGGAGA
 
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rJMSF041C02-          CAACGAAGCGGCTCGGCGAGGAGAAATTTGTGCTACTTGAAACCTTCCTGGCCTTCTCNA
JMSF041C02+           CAACGAAGCGGCTCGGCGAGGAGAAATTTGTGCTACTTGAAACCTTCCTGGCCTTCTCCA
                      ____________________________________________________________
consensus             CAACGAAGCGGCTCGGCGAGGAGAAATTTGTGCTACTTGAAACCTTCCTGGCCTTCTCCA
 
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rJMSF041C02-          GAAGCTTTCCAATAAGAGATTCGTCGAGAGCT                            
JMSF041C02+           GAAGCTTTCCAATAAGAGATTCGTCGAGAGCTTAGGTGAATCTGAATTCTTCGCTCAATC
                      ____________________________________________________________
consensus             GAAGCTTTCCAATAAGAGATTCGTCGAGAGCTTAGGTGAATCTGAATTCTTCGCTCAATC