Contig 006647:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025A23Sequence754006647 (13)dbj|BAD02268.1|3e-118aspartate aminotransferase [Nicotiana tabacum]
JMFF030O10Sequence515000191 (11)gb|KDO46793.1|4e-34hypothetical protein CISIN_1g012238mg [Citrus sinensis]693006647 (13)dbj|BAD02268.1|7e-108aspartate aminotransferase [Nicotiana tabacum]
JMFF031H09Sequence562000191 (11)gb|KDO46793.1|9e-46hypothetical protein CISIN_1g012238mg [Citrus sinensis]767006647 (13)dbj|BAD02268.1|2e-122aspartate aminotransferase [Nicotiana tabacum]
JMFF043O07Sequence643000191 (11)gb|KDO46793.1|3e-52hypothetical protein CISIN_1g012238mg [Citrus sinensis]607006647 (13)dbj|BAD02268.1|1e-80aspartate aminotransferase [Nicotiana tabacum]
JMSF004N05Sequence398000584 (2)ref|XP_009790324.1|3e-36PREDICTED: heat stress transcription factor A-1b [Nicotiana sylvestris]284006647 (13)dbj|BAD02268.1|2e-16aspartate aminotransferase [Nicotiana tabacum]
JMSF005C21Sequence388000191 (11)ref|XP_009789886.1|1e-12PREDICTED: aspartate aminotransferase, chloroplastic [Nicotiana sylvestris] ref463006647 (13)dbj|BAD02268.1|4e-59aspartate aminotransferase [Nicotiana tabacum]
JMSF006H18Sequence401016688ref|XP_004245248.1|108PREDICTED: uncharacterized protein LOC101254717 [Solanum lycopersicum]170006647 (13)
JMSF016P15Sequence446000191 (11)gb|KDO46793.1|2e-46hypothetical protein CISIN_1g012238mg [Citrus sinensis]758006647 (13)dbj|BAD02268.1|4e-133aspartate aminotransferase [Nicotiana tabacum]
JMSF039K02Sequence526006647 (13)dbj|BAD02268.1|2e-46aspartate aminotransferase [Nicotiana tabacum]483006647 (13)dbj|BAD02268.1|1e-46aspartate aminotransferase [Nicotiana tabacum]
JMSF043P13Sequence783000191 (11)gb|KDO46793.1|5e-110hypothetical protein CISIN_1g012238mg [Citrus sinensis]679006647 (13)dbj|BAD02268.1|1e-78aspartate aminotransferase [Nicotiana tabacum]
JMSF044H08Sequence794000191 (11)gb|KDO46793.1|3e-117hypothetical protein CISIN_1g012238mg [Citrus sinensis]786006647 (13)dbj|BAD02268.1|2e-127aspartate aminotransferase [Nicotiana tabacum]
JMSF046M09Sequence805000191 (11)gb|KDO46793.1|7e-92hypothetical protein CISIN_1g012238mg [Citrus sinensis]789006647 (13)dbj|BAD02268.1|1e-112aspartate aminotransferase [Nicotiana tabacum]

Alignment

This contig is upended


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rJMSF016P15+                     CNAGAGAAGAACCACATTCCGTTTTTTGATGTTGCCTATCAGGGA-TTT
rJMSF046M09+                                          TTTTTTGATGTTGCCTATCAGGGATTTT
rJMFF031H09+                                                                   TTT
rJMSF044H08+                                          TTTTTTGATGTTGCCTATCAGGGA-TTT
                      ____________________________________________________________
consensus                        CNAGAGAAGAACCACATTCCGTTTTTTGATGTTGCCTATCAGGGA-TTT
 
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rJMSF016P15+          GCGAGTGGTAGCCTTGATGCAGATGCATCATCTGTGAGAATGTTTGCTTCACGTGGGTTG
rJMSF046M09+          GCGAGTGGTAGCCNTGATGCAGATGCATCATCTGTGAGAATGTTTGCTTCACGTGGGTNG
rJMFF025A23+            GAGTGGTAGCNTTGATGCAGATGCATCATCTGTGAGAATGTTTGCTTCACGTGGGTTG
rJMFF031H09+          GCGAGTGGTAGCCTTGATGCAGATGCATCATCTGTGAGAATGTTTGCTTCACGTGGGTTG
rJMSF044H08+          GCGAGTGGTAGCCTTGATGCAGATGCATCATCTGTGAGAATGTTTGCTTCACGTGGGTTG
                      ____________________________________________________________
consensus             GCGAGTGGTAGCCTTGATGCAGATGCATCATCTGTGAGAATGTTTGCTTCACGTGGGTTG
 
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rJMSF016P15+          GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
rJMSF046M09+          GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
rJMFF025A23+          GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
rJMFF030O10+          GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
rJMFF031H09+          GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
rJMSF044H08+          GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
rJMSF043P13+                                                                  TGGA
                      ____________________________________________________________
consensus             GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
 
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rJMSF016P15+          GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
rJMSF046M09+          GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
rJMFF025A23+          GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
rJMFF030O10+          GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
rJMFF031H09+          GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
rJMSF044H08+          GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
rJMFF043O07+                                                                    GA
rJMSF043P13+          GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTGAAAAAGCCAACTGAA
                      ____________________________________________________________
consensus             GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
 
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rJMSF016P15+          AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMSF046M09+          AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMFF025A23+          AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMFF030O10+          AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMFF031H09+          AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMSF044H08+          AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMFF043O07+          AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMSF043P13+          GAGGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
                      ____________________________________________________________
consensus             AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
 
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rJMSF016P15+          ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMSF046M09+          ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMFF025A23+          ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMFF030O10+          ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMFF031H09+          ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMSF044H08+          ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMFF043O07+          ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMSF005C21+                                CTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMSF043P13+          ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
                      ____________________________________________________________
consensus             ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
 
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rJMSF016P15+          GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMSF046M09+          GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMFF025A23+          GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMFF030O10+          GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMFF031H09+          GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMSF044H08+          GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMFF043O07+          GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMSF039K02+                        GTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMSF005C21+          GGAGGGTAAAGAGCGTGAGGCAAAANCTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMSF043P13+          GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
JMSF039K02-                         GTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
                      ____________________________________________________________
consensus             GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
 
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rJMSF016P15+          GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMSF046M09+          GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMFF025A23+          GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMFF030O10+          GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMFF031H09+          GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMSF044H08+          GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMFF043O07+          GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMSF039K02+          GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMSF005C21+          GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMSF004N05+                                                              CCTGAATA
rJMSF043P13+          GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
JMSF039K02-           GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
                      ____________________________________________________________
consensus             GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
 
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rJMSF016P15+          AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMSF046M09+          AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMFF025A23+          AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMFF030O10+          AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMFF031H09+          AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMSF044H08+          AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMFF043O07+          AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMSF039K02+          AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMSF005C21+          AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMSF004N05+          AANCTCAGAGCGAAACCATGTCGAATAAGTGGCACATATACATGNCCAAAGATGGAAGAA
rJMSF043P13+          AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
JMSF039K02-           AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
                      ____________________________________________________________
consensus             AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
 
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rJMSF016P15+          TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMSF046M09+          TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMFF025A23+          TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMFF030O10+          TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMFF031H09+          TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMSF044H08+          TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMFF043O07+          TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMSF039K02+          TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMSF005C21+          TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMSF004N05+          TNTCCTTGGCTGGCTTATNTGCAGCGANGTGCGAATATCNTGCAGATGCCATCATTGATT
rJMSF043P13+          TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
JMSF039K02-           TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
                      ____________________________________________________________
consensus             TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
 
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rJMSF016P15+          CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMSF046M09+          CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMFF025A23+          CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMFF030O10+          CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMFF031H09+          CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMSF044H08+          CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMFF043O07+          CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMSF039K02+          CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMSF005C21+          CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMSF004N05+          CANATCACAATGTCAGCTNGATAAATAAGACTGGAAGTACATTNTCATAGCAATTTTGAT
rJMSF043P13+          CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
JMSF039K02-           CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
                      ____________________________________________________________
consensus             CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
 
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rJMSF016P15+          GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMSF046M09+          GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMFF025A23+          GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMFF030O10+          GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMFF031H09+          GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMSF044H08+          GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMFF043O07+          GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMSF039K02+          GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMSF005C21+          GAGTTACTTTGTNTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMSF004N05+          GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTNG
rJMSF043P13+          GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMSF006H18+                                       TGACTCTTAACAANTCTNATAATAATCGTTG
JMSF039K02-           GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
                      ____________________________________________________________
consensus             GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
 
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rJMSF016P15+          TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATAT        
rJMSF046M09+          TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAAAATATTGTAAT
rJMFF025A23+          TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMFF030O10+          TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMFF031H09+          TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMSF044H08+          TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATCGGATTCAGAATATATTGTAAT
rJMFF043O07+          TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMSF039K02+          TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMSF005C21+          TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMSF004N05+          TCCAGCATGATGATTTACCCATCAATTAGAAGAGCC                        
rJMSF043P13+          TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMSF006H18+          TCCNGCACNANGATTTACCCATCAATTNGAAGAGCCATTGGATTCAGAATATATNGTAAT
JMSF039K02-           TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
                      ____________________________________________________________
consensus             TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
 
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rJMSF046M09+          -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTT                      
rJMFF025A23+          -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTT                      
rJMFF030O10+          -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATT                       
rJMFF031H09+          -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTT                      
rJMSF044H08+          -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTT                      
rJMFF043O07+          -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTTTGGAACTTTTTGAATGTAAGGT
rJMSF039K02+          -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTTTGGAACTTTTTGAATGTAAGGT
rJMSF005C21+          AATGG                                                       
rJMSF043P13+          -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTTTGGAACTTTTTGAATGTAAGGT
rJMSF006H18+          CAATGGTTTCTCAATGTTAGGGTTGTGCCCAGCAATTTTGGAACTTTTCGAATGTAAGCT
JMSF039K02-           -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTTTGGAACTTTTTGAATGTAAGGT
                      ____________________________________________________________
consensus             -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTTTGGAACTTTTTGAATGTAAGGT
 
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rJMFF043O07+          TTTGC                                                       
rJMSF039K02+          TTTGCGTAAGAGATC                                             
rJMSF043P13+          TTTGCGTAAGAGATC                                             
rJMSF006H18+          TTTGCGTAAGAGATC                                             
JMSF039K02-           TTTGCGTAAGAGATCTTTGTGTGATATGTCAATCCCATTAAATTTACTTGGTAANANANA
                      ____________________________________________________________
consensus             TTTGCGTAAGAGATCTTTGTGTGATATGTCAATCCCATTAAATTTACTTGGTAANANANA