Contig 006647:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025A23Sequence754006647 (13)dbj|BAD02268.1|3e-118aspartate aminotransferase [Nicotiana tabacum]
JMFF030O10Sequence515000191 (11)gb|KDO46793.1|4e-34hypothetical protein CISIN_1g012238mg [Citrus sinensis]693006647 (13)dbj|BAD02268.1|7e-108aspartate aminotransferase [Nicotiana tabacum]
JMFF031H09Sequence562000191 (11)gb|KDO46793.1|9e-46hypothetical protein CISIN_1g012238mg [Citrus sinensis]767006647 (13)dbj|BAD02268.1|2e-122aspartate aminotransferase [Nicotiana tabacum]
JMFF043O07Sequence643000191 (11)gb|KDO46793.1|3e-52hypothetical protein CISIN_1g012238mg [Citrus sinensis]607006647 (13)dbj|BAD02268.1|1e-80aspartate aminotransferase [Nicotiana tabacum]
JMSF004N05Sequence398000584 (2)ref|XP_009790324.1|3e-36PREDICTED: heat stress transcription factor A-1b [Nicotiana sylvestris]284006647 (13)dbj|BAD02268.1|2e-16aspartate aminotransferase [Nicotiana tabacum]
JMSF005C21Sequence388000191 (11)ref|XP_009789886.1|1e-12PREDICTED: aspartate aminotransferase, chloroplastic [Nicotiana sylvestris] ref463006647 (13)dbj|BAD02268.1|4e-59aspartate aminotransferase [Nicotiana tabacum]
JMSF006H18Sequence401016688ref|XP_004245248.1|108PREDICTED: uncharacterized protein LOC101254717 [Solanum lycopersicum]170006647 (13)
JMSF016P15Sequence446000191 (11)gb|KDO46793.1|2e-46hypothetical protein CISIN_1g012238mg [Citrus sinensis]758006647 (13)dbj|BAD02268.1|4e-133aspartate aminotransferase [Nicotiana tabacum]
JMSF039K02Sequence526006647 (13)dbj|BAD02268.1|2e-46aspartate aminotransferase [Nicotiana tabacum]483006647 (13)dbj|BAD02268.1|1e-46aspartate aminotransferase [Nicotiana tabacum]
JMSF043P13Sequence783000191 (11)gb|KDO46793.1|5e-110hypothetical protein CISIN_1g012238mg [Citrus sinensis]679006647 (13)dbj|BAD02268.1|1e-78aspartate aminotransferase [Nicotiana tabacum]
JMSF044H08Sequence794000191 (11)gb|KDO46793.1|3e-117hypothetical protein CISIN_1g012238mg [Citrus sinensis]786006647 (13)dbj|BAD02268.1|2e-127aspartate aminotransferase [Nicotiana tabacum]
JMSF046M09Sequence805000191 (11)gb|KDO46793.1|7e-92hypothetical protein CISIN_1g012238mg [Citrus sinensis]789006647 (13)dbj|BAD02268.1|1e-112aspartate aminotransferase [Nicotiana tabacum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016P15+ CNAGAGAAGAACCACATTCCGTTTTTTGATGTTGCCTATCAGGGA-TTT
rJMSF046M09+ TTTTTTGATGTTGCCTATCAGGGATTTT
rJMFF031H09+ TTT
rJMSF044H08+ TTTTTTGATGTTGCCTATCAGGGA-TTT
                      ____________________________________________________________
consensus CNAGAGAAGAACCACATTCCGTTTTTTGATGTTGCCTATCAGGGA-TTT
 
. : . : . : . : . : . :
rJMSF016P15+ GCGAGTGGTAGCCTTGATGCAGATGCATCATCTGTGAGAATGTTTGCTTCACGTGGGTTG
rJMSF046M09+ GCGAGTGGTAGCCNTGATGCAGATGCATCATCTGTGAGAATGTTTGCTTCACGTGGGTNG
rJMFF025A23+ GAGTGGTAGCNTTGATGCAGATGCATCATCTGTGAGAATGTTTGCTTCACGTGGGTTG
rJMFF031H09+ GCGAGTGGTAGCCTTGATGCAGATGCATCATCTGTGAGAATGTTTGCTTCACGTGGGTTG
rJMSF044H08+ GCGAGTGGTAGCCTTGATGCAGATGCATCATCTGTGAGAATGTTTGCTTCACGTGGGTTG
                      ____________________________________________________________
consensus GCGAGTGGTAGCCTTGATGCAGATGCATCATCTGTGAGAATGTTTGCTTCACGTGGGTTG
 
. : . : . : . : . : . :
rJMSF016P15+ GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
rJMSF046M09+ GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
rJMFF025A23+ GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
rJMFF030O10+ GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
rJMFF031H09+ GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
rJMSF044H08+ GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
rJMSF043P13+ TGGA
                      ____________________________________________________________
consensus GAGCTGCTTGTTGCTCAGTCGTACAGTAAGAATCTGGGTCTTTATGCTGAAAGGATTGGA
 
. : . : . : . : . : . :
rJMSF016P15+ GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
rJMSF046M09+ GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
rJMFF025A23+ GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
rJMFF030O10+ GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
rJMFF031H09+ GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
rJMSF044H08+ GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
rJMFF043O07+ GA
rJMSF043P13+ GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTGAAAAAGCCAACTGAA
                      ____________________________________________________________
consensus GCTATCAATGTTGTTTGCTCATCAGCGGATGCAGCAGCAAGGGTG-AAAAGCCAACTG-A
 
. : . : . : . : . : . :
rJMSF016P15+ AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMSF046M09+ AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMFF025A23+ AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMFF030O10+ AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMFF031H09+ AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMSF044H08+ AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMFF043O07+ AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
rJMSF043P13+ GAGGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
                      ____________________________________________________________
consensus AGAGGCTGGCACGGCCAATGTACTCAAATCCTCCCATACATGGAGCTAGGATTGTTGCCA
 
. : . : . : . : . : . :
rJMSF016P15+ ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMSF046M09+ ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMFF025A23+ ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMFF030O10+ ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMFF031H09+ ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMSF044H08+ ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMFF043O07+ ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMSF005C21+ CTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
rJMSF043P13+ ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
                      ____________________________________________________________
consensus ATGTCGTAGGAAACCCCGAGCTCTTCAATGAATGGAAACAAGAGATGGAAATGATGGCAG
 
. : . : . : . : . : . :
rJMSF016P15+ GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMSF046M09+ GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMFF025A23+ GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMFF030O10+ GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMFF031H09+ GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMSF044H08+ GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMFF043O07+ GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMSF039K02+ GTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMSF005C21+ GGAGGGTAAAGAGCGTGAGGCAAAANCTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
rJMSF043P13+ GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
JMSF039K02- GTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
                      ____________________________________________________________
consensus GGAGGATAAAGAGCGTGAGGCAAAAACTATATGACAGCCTGTCTTTGAAGGACAAGAGTG
 
. : . : . : . : . : . :
rJMSF016P15+ GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMSF046M09+ GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMFF025A23+ GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMFF030O10+ GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMFF031H09+ GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMSF044H08+ GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMFF043O07+ GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMSF039K02+ GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMSF005C21+ GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
rJMSF004N05+ CCTGAATA
rJMSF043P13+ GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
JMSF039K02- GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
                      ____________________________________________________________
consensus GGAAGGACTGGACATTTATTCTGAAGCAGATTGGCATGTTTTCCTTTACCGGCCTGAATA
 
. : . : . : . : . : . :
rJMSF016P15+ AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMSF046M09+ AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMFF025A23+ AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMFF030O10+ AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMFF031H09+ AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMSF044H08+ AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMFF043O07+ AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMSF039K02+ AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMSF005C21+ AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
rJMSF004N05+ AANCTCAGAGCGAAACCATGTCGAATAAGTGGCACATATACATGNCCAAAGATGGAAGAA
rJMSF043P13+ AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
JMSF039K02- AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
                      ____________________________________________________________
consensus AAGCTCAGAGCGAAAACATGTCGAATAAGTGGCATATATACATGACCAAAGATGGAAGAA
 
. : . : . : . : . : . :
rJMSF016P15+ TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMSF046M09+ TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMFF025A23+ TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMFF030O10+ TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMFF031H09+ TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMSF044H08+ TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMFF043O07+ TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMSF039K02+ TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMSF005C21+ TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
rJMSF004N05+ TNTCCTTGGCTGGCTTATNTGCAGCGANGTGCGAATATCNTGCAGATGCCATCATTGATT
rJMSF043P13+ TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
JMSF039K02- TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
                      ____________________________________________________________
consensus TATCCTTGGCTGGCTTATCTGCAGCGAAGTGCGAATATCTTGCAGATGCCATCATTGATT
 
. : . : . : . : . : . :
rJMSF016P15+ CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMSF046M09+ CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMFF025A23+ CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMFF030O10+ CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMFF031H09+ CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMSF044H08+ CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMFF043O07+ CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMSF039K02+ CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMSF005C21+ CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
rJMSF004N05+ CANATCACAATGTCAGCTNGATAAATAAGACTGGAAGTACATTNTCATAGCAATTTTGAT
rJMSF043P13+ CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
JMSF039K02- CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
                      ____________________________________________________________
consensus CATATTACAATGTCAGCTAGATAAATAAGACTGGAAGTACATTTTCATAGCAATTTTGAT
 
. : . : . : . : . : . :
rJMSF016P15+ GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMSF046M09+ GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMFF025A23+ GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMFF030O10+ GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMFF031H09+ GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMSF044H08+ GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMFF043O07+ GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMSF039K02+ GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMSF005C21+ GAGTTACTTTGTNTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMSF004N05+ GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTNG
rJMSF043P13+ GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
rJMSF006H18+ TGACTCTTAACAANTCTNATAATAATCGTTG
JMSF039K02- GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
                      ____________________________________________________________
consensus GAGTTACTTTGTTTCACTCTTTGATCCAATGACTTTTAACAAATCTTATAATAATAGTTG
 
. : . : . : . : . : . :
rJMSF016P15+ TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATAT
rJMSF046M09+ TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAAAATATTGTAAT
rJMFF025A23+ TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMFF030O10+ TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMFF031H09+ TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMSF044H08+ TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATCGGATTCAGAATATATTGTAAT
rJMFF043O07+ TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMSF039K02+ TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMSF005C21+ TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMSF004N05+ TCCAGCATGATGATTTACCCATCAATTAGAAGAGCC
rJMSF043P13+ TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
rJMSF006H18+ TCCNGCACNANGATTTACCCATCAATTNGAAGAGCCATTGGATTCAGAATATATNGTAAT
JMSF039K02- TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
                      ____________________________________________________________
consensus TCCAGCATGATGATTTACCCATCAATTAGAAGAGCCATTGGATTCAGAATATATTGTAAT
 
. : . : . : . : . : . :
rJMSF046M09+ -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTT
rJMFF025A23+ -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTT
rJMFF030O10+ -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATT
rJMFF031H09+ -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTT
rJMSF044H08+ -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTT
rJMFF043O07+ -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTTTGGAACTTTTTGAATGTAAGGT
rJMSF039K02+ -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTTTGGAACTTTTTGAATGTAAGGT
rJMSF005C21+ AATGG
rJMSF043P13+ -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTTTGGAACTTTTTGAATGTAAGGT
rJMSF006H18+ CAATGGTTTCTCAATGTTAGGGTTGTGCCCAGCAATTTTGGAACTTTTCGAATGTAAGCT
JMSF039K02- -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTTTGGAACTTTTTGAATGTAAGGT
                      ____________________________________________________________
consensus -AATGGTTTTTCAATGTTA-GGTTGTGCCAAGAAATTTTGGAACTTTTTGAATGTAAGGT
 
. : . : . : . : . : . :
rJMFF043O07+ TTTGC
rJMSF039K02+ TTTGCGTAAGAGATC
rJMSF043P13+ TTTGCGTAAGAGATC
rJMSF006H18+ TTTGCGTAAGAGATC
JMSF039K02- TTTGCGTAAGAGATCTTTGTGTGATATGTCAATCCCATTAAATTTACTTGGTAANANANA
                      ____________________________________________________________
consensus TTTGCGTAAGAGATCTTTGTGTGATATGTCAATCCCATTAAATTTACTTGGTAANANANA