| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS043H10 | Sequence | 593 | 006646 (4) | ref|XP_009799251.1| | 8e-09 | PREDICTED: auxilin-related protein 2-like [Nicotiana sylvestris] ref|XP_00979925 | |||||
| JMFS078F06 | Sequence | 619 | 006646 (4) | ref|XP_009799251.1| | 3e-16 | PREDICTED: auxilin-related protein 2-like [Nicotiana sylvestris] ref|XP_00979925 | |||||
| JMFS090C02 | Sequence | 617 | 006646 (4) | ref|XP_009799251.1| | 3e-16 | PREDICTED: auxilin-related protein 2-like [Nicotiana sylvestris] ref|XP_00979925 | |||||
| JMSF039J14 | Sequence | 676 | 006646 (4) | ref|XP_009799251.1| | 2e-13 | PREDICTED: auxilin-related protein 2-like [Nicotiana sylvestris] ref|XP_00979925 | 858 | 023598 | emb|CBI21587.3| | 2e-64 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMSF039J14+ ATACCGGCAAAGATGA
____________________________________________________________
consensus ATACCGGCAAAGATGA
. : . : . : . : . : . :
JMFS090C02+ GAATCATTGCCAGATTTGAAAATGGAATCGTAATCGAA
JMFS078F06+ GAATCATTGCCAGATTTGAAAATGGAATCGTAATCGAA
JMSF039J14+ CTTCTTGCTGTTATTTTTCTTTGAATCATTGCCAGATTTGAAAATGGAATCGTAATCGAA
____________________________________________________________
consensus CTTCTTGCTGTTATTTTTCTTTGAATCATTGCCAGATTTGAAAATGGAATCGTAATCGAA
. : . : . : . : . : . :
JMFS090C02+ ATTATTCATCATCGTCGAGGCCTTATTGTTGGTATTGGAATTGGTATACTTTGGCGGGCC
JMFS078F06+ ATTATTCATCATCGTCGAGGCCTTATTGTTGGTATTGGAATTGGTATACTTTGGCGGGCC
JMFS043H10+ TCATCATCGTCGAGGCCTTATTGTTGGTATTGGAATTGGTATACTTTGGCGGGCC
JMSF039J14+ ATTATTCATCATCGTCGAGGCCTTATTGTTGGTATTGGAATTGGTATACTTTGGCGGGCC
____________________________________________________________
consensus ATTATTCATCATCGTCGAGGCCTTATTGTTGGTATTGGAATTGGTATACTTTGGCGGGCC
. : . : . : . : . : . :
JMFS090C02+ ACCAAAGACATCGTCGAACACTGGACCCTCGCGATCGTCGAAGAACGCTGAGGACCGGGC
JMFS078F06+ ACCAAAGACATCGTCGAACACTGGACCCTCGCGATCGTCGAAGAACGCTGAGGACCGGGC
JMFS043H10+ ACCAAAGACATCGTCGAACACTGGACCCTCGCGATCGTCGAAGAACGCTGAGGACCGGGC
JMSF039J14+ ACCAAAGACATCGTCGAACACTGGACCCTCGCGATCGTCGAAGAACGCTGAGGACCGGGC
____________________________________________________________
consensus ACCAAAGACATCGTCGAACACTGGACCCTCGCGATCGTCGAAGAACGCTGAGGACCGGGC
. : . : . : . : . : . :
JMFS090C02+ GGAGGCAGAGCGGCGATCTCCGCCGTCGGATCTCATGGGTGCCGATTTGCCACCAGGTCG
JMFS078F06+ GGAGGCAGAGCGGCGATCTCCGCCGTCGGATCTCATGGGTGCCGATTTGCCACCAGGTCG
JMFS043H10+ GGAGGCAGAGCGGCGATCTCCGCCGTCGGATCTCATGGGTGCCGATTTGCCACCAGGTCG
JMSF039J14+ GGAGGCAGAGCGGCGATCTCCGCCGTCGGATCTCATGGGTGCCGATTTGCCACCAGGTCG
____________________________________________________________
consensus GGAGGCAGAGCGGCGATCTCCGCCGTCGGATCTCATGGGTGCCGATTTGCCACCAGGTCG
. : . : . : . : . : . :
JMFS090C02+ GAGGCCGTAGTCTCGCGCCAACACGTCCAGTTCATCCATTGCAGAGACTGTTCAAATTGC
JMFS078F06+ GAGGCCGTAGTCTCGCGCCAACACGTCCAGTTCATCCATTGCAGAGACTGTTCAAATTGC
JMFS043H10+ GAGGCCGTAGTCTCGCGCCAACACGTCCAGTTCATCCATTGCAGAGACTGTTCAAATTGC
JMSF039J14+ GAGGCCGTAGTCTCGCGCCAACACGTCCAGTTCATCCATTGCAGAGACTGTTCAAATTGC
____________________________________________________________
consensus GAGGCCGTAGTCTCGCGCCAACACGTCCAGTTCATCCATTGCAGAGACTGTTCAAATTGC
. : . : . : . : . : . :
JMFS090C02+ TGCAGATCTTAGCCCGAATCCCCCTCGGAAGCAGGGAAAAGATCTCTGTTATGGATCTAA
JMFS078F06+ TGCAGATCTTAGCCCGAATCCCCCTCGGAAGCAGGGAAAAGATCTCTGTTATGGATCTAA
JMFS043H10+ TGCAGATCTTAGCCCGAATCCCCCTCGGAAGCAGGGAAAAGATCTCTGTTATGGATCTAA
JMSF039J14+ TGCAGATCTTAGCCCGAATCCCCCTCGGAAGCAGGGAAAAGATCTCTGTTATGGATCTAA
____________________________________________________________
consensus TGCAGATCTTAGCCCGAATCCCCCTCGGAAGCAGGGAAAAGATCTCTGTTATGGATCTAA
. : . : . : . : . : . :
JMFS090C02+ AAATTAGAACGGATTGTAAGGGCAAAATCTTCCAATTGAATCAAACTGAGCAGGCAATTG
JMFS078F06+ AAATTAGAACGGATTGTAAGGGCAAAATCTTCCAATTGAATCAAACTGAGCAGGCAATTG
JMFS043H10+ AAATTAGAACGGATTGTAAGGGCAAAATCTTCCAATTGAATCAAACTGAGCAGGCAATTG
JMSF039J14+ AAATTAGAACGGATTGTAAGGGCAAAATCTTCCAATTGAATCAAACTGAGCAGGCAATTG
____________________________________________________________
consensus AAATTAGAACGGATTGTAAGGGCAAAATCTTCCAATTGAATCAAACTGAGCAGGCAATTG
. : . : . : . : . : . :
JMFS090C02+ TGGCTGAATGATCAAAGATTATTATTCCATATATGAATATGATATGAACACAACGGATTA
JMFS078F06+ TGGCTGAATGATCAAAGATTATTATTCCATATATGAATATGATATGAACACAACGGATTA
JMFS043H10+ TGGCTGAATGATCAAAGATTATTATTCCATATATGAATATGATATGAACACAACGGATTA
JMSF039J14+ TGGCTGAATGATCAAAGATTATTATTCCATATATGAATATGATATGAACACAACGGATTA
____________________________________________________________
consensus TGGCTGAATGATCAAAGATTATTATTCCATATATGAATATGATATGAACACAACGGATTA
. : . : . : . : . : . :
JMFS090C02+ ATGGCAATATATGTATGTATATAGATATATGTGTGCATATAGCTTGATACAGATAATAGG
JMFS078F06+ ATGGCAATATATGTATGTATATAGATATATGTGTGCATATAGCTTGATACAGATAATAGG
JMFS043H10+ ATGGCAATATATGTATGTATATAGATATATGTGTGCATATAGCTTGATACAGATAATAGG
JMSF039J14+ ATGGCAATATATGTATGTATATAGATATATGTGTGCATATAGCTTGATACAGATAATAGG
____________________________________________________________
consensus ATGGCAATATATGTATGTATATAGATATATGTGTGCATATAGCTTGATACAGATAATAGG
. : . : . : . : . : . :
JMFS090C02+ AAGATGGAGAAATGTTGATTAGGGTTTGAAGGGGAAGGAAGATGAGTTGATTTCTTGTCT
JMFS078F06+ AAGATGGAGAAATGTTGATTAGGGTTTGAAGGGGAAGGAAGATGAGTTGATTTCTTGTCT
JMFS043H10+ AAGATGGAGAAATGTTGATTAGGGTTTGAAGGGGAAGGAAGATGAGTTGATTTCTTGTCT
JMSF039J14+ AAGATGGAGAAATGTTGATTAGGGTTTGAAGGGGAAGGAAGATGAGTTGATTTCTTGTCT
____________________________________________________________
consensus AAGATGGAGAAATGTTGATTAGGGTTTGAAGGGGAAGGAAGATGAGTTGATTTCTTGTCT
. : . : . : . : . : . :
JMFS090C02+ TCTCTTTTTCTCTGTTTCCTGTCTTCGTCTTCCTTGCTC
JMFS078F06+ TCTCTTTTTCTCTGTTTCCTGTCTTCGTCTTCCTTGCTC
JMFS043H10+ TCTCTTTTTCTCTGTTTCCTGTCTTCGTCTTCCTTGCTCCACCTCCGTAGCCTGTTCT
JMSF039J14+ TCTCTTTTTCTCTGTTTCCTGTCTTCGTCTTCCTTGCTCCACCTCCGTAGCCTGTTCTTC
____________________________________________________________
consensus TCTCTTTTTCTCTGTTTCCTGTCTTCGTCTTCCTTGCTCCACCTCCGTAGCCTGTTCTTC