Contig 006642:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039E07Sequence701006642 (2)ref|XP_009595172.1|2e-106PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like 931005782 (2)ref|XP_002513896.1|1e-140Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus
JMSF040K19Sequence666006642 (2)gb|KDP41359.1|9e-98hypothetical protein JCGZ_15766 [Jatropha curcas]831005782 (2)ref|XP_002513896.1|4e-125Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus

Alignment

This contig is upended


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JMSF040K19+                                                            CAACAATGGTC
JMSF039E07+                              TAAGCTTCACGAACATCTTCACAAGAGTTGCAACAATGGTC
                      ____________________________________________________________
consensus                                TAAGCTTCACGAACATCTTCACAAGAGTTGCAACAATGGTC
 
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JMSF040K19+           ATCTGACGCTTNTGCACCGTAACATGAGCCACAGTATGTCTCATTGTGTTCAAGCCTACC
JMSF039E07+           ATCTGACGCTTCTGCACCGTAACATGAGCCACAGTATGTCTCATTGTGTTCAAGCCTACC
                      ____________________________________________________________
consensus             ATCTGACGCTTCTGCACCGTAACATGAGCCACAGTATGTCTCATTGTGTTCAAGCCTACC
 
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JMSF040K19+           ACCATGTTTTTGCAGAGGTCTTTCAATCTTTGGAGCACCAATACCATCCTGCCTTGTTTC
JMSF039E07+           ACCATGTTTTTGCAGAGGTCTTTCAATCTTTGGAGCACCAATACCATCCTGCCTTGTTTC
                      ____________________________________________________________
consensus             ACCATGTTTTTGCAGAGGTCTTTCAATCTTTGGAGCACCAATACCATCCTGCCTTGTTTC
 
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JMSF040K19+           AATTACATTACCATCAGAATCAATCCTTTTCTTGATAATGTCATGTCTAACATCAAGGTG
JMSF039E07+           AATTACATTACCATCAGAATCAATCCTTTTCTTGATAATGTCATGTCTAACATCAAGGTG
                      ____________________________________________________________
consensus             AATTACATTACCATCAGAATCAATCCTTTTCTTGATAATGTCATGTCTAACATCAAGGTG
 
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JMSF040K19+           CTGCTCTCCACTTATATCCATGGCATCAACACTGAGAATGGAACATGGAAGTGCTGGGAA
JMSF039E07+           CTGCTCTCCACTTATATCCATGGCATCAACACTGAGAATGGAACATGGAAGTGCTGGGAA
                      ____________________________________________________________
consensus             CTGCTCTCCACTTATATCCATGGCATCAACACTGAGAATGGAACATGGAAGTGCTGGGAA
 
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JMSF040K19+           GGTAACATCAAAATTAATACGAAGTGTTTCTCCTCTTGAAGTGTCTACCACAAGCTTTGT
JMSF039E07+           GGTAACATCAAAATTAATACGAAGTGTTTCTCCTCTTGAAGTGTCTACCACAAGCTTTGT
                      ____________________________________________________________
consensus             GGTAACATCAAAATTAATACGAAGTGTTTCTCCTCTTGAAGTGTCTACCACAAGCTTTGT
 
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JMSF040K19+           CTCAGTTACAGCATGGAGATACAGCCTGAGCTCGGAAATGAACAGCAATATCATGACTAT
JMSF039E07+           CTCAGTTACAGCATGGAGATACAGCCTGAGCTCGGAAATGAACAGCAATATCATGACTAT
                      ____________________________________________________________
consensus             CTCAGTTACAGCATGGAGATACAGCCTGAGCTCGGAAATGAACAGCAATATCATGACTAT
 
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JMSF040K19+           GGAGGAAGCTAGGGTAATAACGCCACCGGAGATAGTTCTGCTGTAGAAATCTTCATTGAT
JMSF039E07+           GGAGGAAGCTAGGGTAATAACGCCACCGGAGATAGTTCTGCTGTAGAAATCTTCATTGAT
                      ____________________________________________________________
consensus             GGAGGAAGCTAGGGTAATAACGCCACCGGAGATAGTTCTGCTGTAGAAATCTTCATTGAT
 
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JMSF040K19+           CTTCGGATACGCATCCAAGCTTCGAATCCTGCTCATTAACTTCTCCATCTCGCCGCAAAA
JMSF039E07+           CTTCGGATACGCATCCAAGCTTCGAATCCTGCTCATTAACTTCTCCATCTCGCCGCAAAA
                      ____________________________________________________________
consensus             CTTCGGATACGCATCCAAGCTTCGAATCCTGCTCATTAACTTCTCCATCTCGCCGCAAAA
 
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JMSF040K19+           TCTCTCTCGTGCGTTACTTAGATAACTTCTTTATTACAGAAATTTGAAATAAGAAGATAA
JMSF039E07+           TCTCTCTCGTGCGTTACTTAGATAATTTCTTTATTACAGAAATTTGAAATAAGAAGATAA
                      ____________________________________________________________
consensus             TCTCTCTCGTGCGTTACTTAGATAATTTCTTTATTACAGAAATTTGAAATAAGAAGATAA
 
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JMSF040K19+           AAGAGATCTCGAATCGGATTATAAATGAACAAATCGATTATTTGACCGGCTTAAACGCCC
JMSF039E07+           AAGAGATCTCGAATCGGATTATAAATGAACAAATCGATTATTTGACCGGCTTAAACGCCC
                      ____________________________________________________________
consensus             AAGAGATCTCGAATCGGATTATAAATGAACAAATCGATTATTTGACCGGCTTAAACGCCC
 
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JMSF040K19+           CGTCGAATGGTCTCCGATTATCGACGGAGGCGTTTAAGTCTTCTCCTTCTTCC       
JMSF039E07+           CGTCGAATGGTCTCCGATTATCGACGGAGGCGTTTAAGTCTTCTCCTTCTTCCTCCTTTC
                      ____________________________________________________________
consensus             CGTCGAATGGTCTCCGATTATCGACGGAGGCGTTTAAGTCTTCTCCTTCTTCCTCCTTTC