Contig 006642:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039E07Sequence701006642 (2)ref|XP_009595172.1|2e-106PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like 931005782 (2)ref|XP_002513896.1|1e-140Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus
JMSF040K19Sequence666006642 (2)gb|KDP41359.1|9e-98hypothetical protein JCGZ_15766 [Jatropha curcas]831005782 (2)ref|XP_002513896.1|4e-125Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF040K19+ CAACAATGGTC
JMSF039E07+ TAAGCTTCACGAACATCTTCACAAGAGTTGCAACAATGGTC
                      ____________________________________________________________
consensus TAAGCTTCACGAACATCTTCACAAGAGTTGCAACAATGGTC
 
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JMSF040K19+ ATCTGACGCTTNTGCACCGTAACATGAGCCACAGTATGTCTCATTGTGTTCAAGCCTACC
JMSF039E07+ ATCTGACGCTTCTGCACCGTAACATGAGCCACAGTATGTCTCATTGTGTTCAAGCCTACC
                      ____________________________________________________________
consensus ATCTGACGCTTCTGCACCGTAACATGAGCCACAGTATGTCTCATTGTGTTCAAGCCTACC
 
. : . : . : . : . : . :
JMSF040K19+ ACCATGTTTTTGCAGAGGTCTTTCAATCTTTGGAGCACCAATACCATCCTGCCTTGTTTC
JMSF039E07+ ACCATGTTTTTGCAGAGGTCTTTCAATCTTTGGAGCACCAATACCATCCTGCCTTGTTTC
                      ____________________________________________________________
consensus ACCATGTTTTTGCAGAGGTCTTTCAATCTTTGGAGCACCAATACCATCCTGCCTTGTTTC
 
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JMSF040K19+ AATTACATTACCATCAGAATCAATCCTTTTCTTGATAATGTCATGTCTAACATCAAGGTG
JMSF039E07+ AATTACATTACCATCAGAATCAATCCTTTTCTTGATAATGTCATGTCTAACATCAAGGTG
                      ____________________________________________________________
consensus AATTACATTACCATCAGAATCAATCCTTTTCTTGATAATGTCATGTCTAACATCAAGGTG
 
. : . : . : . : . : . :
JMSF040K19+ CTGCTCTCCACTTATATCCATGGCATCAACACTGAGAATGGAACATGGAAGTGCTGGGAA
JMSF039E07+ CTGCTCTCCACTTATATCCATGGCATCAACACTGAGAATGGAACATGGAAGTGCTGGGAA
                      ____________________________________________________________
consensus CTGCTCTCCACTTATATCCATGGCATCAACACTGAGAATGGAACATGGAAGTGCTGGGAA
 
. : . : . : . : . : . :
JMSF040K19+ GGTAACATCAAAATTAATACGAAGTGTTTCTCCTCTTGAAGTGTCTACCACAAGCTTTGT
JMSF039E07+ GGTAACATCAAAATTAATACGAAGTGTTTCTCCTCTTGAAGTGTCTACCACAAGCTTTGT
                      ____________________________________________________________
consensus GGTAACATCAAAATTAATACGAAGTGTTTCTCCTCTTGAAGTGTCTACCACAAGCTTTGT
 
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JMSF040K19+ CTCAGTTACAGCATGGAGATACAGCCTGAGCTCGGAAATGAACAGCAATATCATGACTAT
JMSF039E07+ CTCAGTTACAGCATGGAGATACAGCCTGAGCTCGGAAATGAACAGCAATATCATGACTAT
                      ____________________________________________________________
consensus CTCAGTTACAGCATGGAGATACAGCCTGAGCTCGGAAATGAACAGCAATATCATGACTAT
 
. : . : . : . : . : . :
JMSF040K19+ GGAGGAAGCTAGGGTAATAACGCCACCGGAGATAGTTCTGCTGTAGAAATCTTCATTGAT
JMSF039E07+ GGAGGAAGCTAGGGTAATAACGCCACCGGAGATAGTTCTGCTGTAGAAATCTTCATTGAT
                      ____________________________________________________________
consensus GGAGGAAGCTAGGGTAATAACGCCACCGGAGATAGTTCTGCTGTAGAAATCTTCATTGAT
 
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JMSF040K19+ CTTCGGATACGCATCCAAGCTTCGAATCCTGCTCATTAACTTCTCCATCTCGCCGCAAAA
JMSF039E07+ CTTCGGATACGCATCCAAGCTTCGAATCCTGCTCATTAACTTCTCCATCTCGCCGCAAAA
                      ____________________________________________________________
consensus CTTCGGATACGCATCCAAGCTTCGAATCCTGCTCATTAACTTCTCCATCTCGCCGCAAAA
 
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JMSF040K19+ TCTCTCTCGTGCGTTACTTAGATAACTTCTTTATTACAGAAATTTGAAATAAGAAGATAA
JMSF039E07+ TCTCTCTCGTGCGTTACTTAGATAATTTCTTTATTACAGAAATTTGAAATAAGAAGATAA
                      ____________________________________________________________
consensus TCTCTCTCGTGCGTTACTTAGATAATTTCTTTATTACAGAAATTTGAAATAAGAAGATAA
 
. : . : . : . : . : . :
JMSF040K19+ AAGAGATCTCGAATCGGATTATAAATGAACAAATCGATTATTTGACCGGCTTAAACGCCC
JMSF039E07+ AAGAGATCTCGAATCGGATTATAAATGAACAAATCGATTATTTGACCGGCTTAAACGCCC
                      ____________________________________________________________
consensus AAGAGATCTCGAATCGGATTATAAATGAACAAATCGATTATTTGACCGGCTTAAACGCCC
 
. : . : . : . : . : . :
JMSF040K19+ CGTCGAATGGTCTCCGATTATCGACGGAGGCGTTTAAGTCTTCTCCTTCTTCC
JMSF039E07+ CGTCGAATGGTCTCCGATTATCGACGGAGGCGTTTAAGTCTTCTCCTTCTTCCTCCTTTC
                      ____________________________________________________________
consensus CGTCGAATGGTCTCCGATTATCGACGGAGGCGTTTAAGTCTTCTCCTTCTTCCTCCTTTC