| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF002P07 | Sequence | 255 | 006640 (6) | 732 | 006640 (6) | ref|XP_011078473.1| | 9e-96 | PREDICTED: phosphoglycerate mutase-like protein 1 isoform X2 [Sesamum indicum] | |||
| JMSF005L21 | Sequence | 317 | 006640 (6) | 461 | 016006 | ref|XP_009629966.1| | 131 | PREDICTED: uncharacterized protein LOC104120023, partial [Nicotiana tomentosifo | |||
| JMSF039C05 | Sequence | 670 | 006640 (6) | ref|XP_009757125.1| | 6e-69 | PREDICTED: probable phosphomutase PMU1 [Nicotiana sylvestris] ref|XP_009757126.1 | 410 | 006640 (6) | ref|XP_011078473.1| | 6e-66 | PREDICTED: phosphoglycerate mutase-like protein 1 isoform X2 [Sesamum indicum] |
| JMSF041O05 | Sequence | 754 | 021150 | 633 | 006640 (6) | ref|XP_011078473.1| | 2e-78 | PREDICTED: phosphoglycerate mutase-like protein 1 isoform X2 [Sesamum indicum] | |||
This contig is upended
. : . : . : . : . : . :
rJMSF041O05- GTTTTGATGGGTGCGTGCGTGCTTC
rJMSF002P07- GTTTTGATGGGTGCGTGCGTGCTTC
____________________________________________________________
consensus GTTTTGATGGGTGCGTGCGTGCTTC
. : . : . : . : . : . :
rJMSF041O05- TAGATTGACAAATCTCAATTGTTTTTAAAATCATGTTGGGAGATACAGAAACATGATGCT
rJMSF002P07- TAGATTGACAAATCTCAATTGTTTTTAAAATCATGTTGGGAGATACAGAAACATGATGCT
____________________________________________________________
consensus TAGATTGACAAATCTCAATTGTTTTTAAAATCATGTTGGGAGATACAGAAACATGATGCT
. : . : . : . : . : . :
rJMSF041O05- CCAAATGAATCGAACGAAGCCTCTAAAGCCAAAAAATCTCTGTTTGCTGCAGTTCAAATC
rJMSF002P07- CCAAATGAATCGAACGAAGCCTCTAAAGCCAAAAAATCTCTGTTTGCTGCAGTTCAAATC
____________________________________________________________
consensus CCAAATGAATCGAACGAAGCCTCTAAAGCCAAAAAATCTCTGTTTGCTGCAGTTCAAATC
. : . : . : . : . : . :
rJMSF041O05- ATCTAGGCAGATCATCTGGATGCTTCAGAGCTGAGCTGCATCATAGCTTCATTCGCTTGG
rJMSF002P07- ATCTAGGCAGATCATCTGGATGCTTCAGAGCTGAGCTGCATCATAGCTTCATTCGCTTGG
____________________________________________________________
consensus ATCTAGGCAGATCATCTGGATGCTTCAGAGCTGAGCTGCATCATAGCTTCATTCGCTTGG
. : . : . : . : . : . :
rJMSF041O05- GACGTCTGATCCACTGGGAATTTTACCGGGATAGTCGGTTGTGGGGGTATCTGATCCAAT
rJMSF002P07- GACGTCTGATCCACTGGGAATTTTACCGGGATAGTCGGTTGTGGGGGTATCTGATCCAAT
____________________________________________________________
consensus GACGTCTGATCCACTGGGAATTTTACCGGGATAGTCGGTTGTGGGGGTATCTGATCCAAT
. : . : . : . : . : . :
rJMSF041O05- CATACATCTGTCAACAATAACCATTGACCGAAGTTCACAATTGTTAAATGGTCTGCAAAT
rJMSF002P07- CATACATCTGTCAACAATAACCATTGACCGAAGTTCACAATTGTTAAATGGTCTGCAAAT
____________________________________________________________
consensus CATACATCTGTCAACAATAACCATTGACCGAAGTTCACAATTGTTAAATGGTCTGCAAAT
. : . : . : . : . : . :
rJMSF041O05- TTCATTCTTCACATTTGGATTGCAGTCATTTCCAAATTGTCTTAGAGTATGAATTAAGAA
rJMSF002P07- TTCATTCTTCACATTTGGATTGCAGTCATTTCCAAATTGTCTTAGAGTATGAATTAAGAA
rJMSF039C05- GAATTAAGAA
____________________________________________________________
consensus TTCATTCTTCACATTTGGATTGCAGTCATTTCCAAATTGTCTTAGAGTATGAATTAAGAA
. : . : . : . : . : . :
rJMSF041O05- TCCACTGTGAGTAACAACTGCAATTTCCTTCTCCTTCCGCGTCAACAACCAGTTTAAAAA
rJMSF002P07- TCCACTGTGAGTAACAACTGCAATTTCCTTCTCCTTCCGCGTCAACAACCAGTTTAAAAA
rJMSF039C05- TCCNCTGTGANTAACNNCTGNNATTTCCTTCTCCTTCCGCGNCANCAACCAGTTTAAAAA
____________________________________________________________
consensus TCCACTGTGAGTAACAACTGCAATTTCCTTCTCCTTCCGCGTCAACAACCAGTTTAAAAA
. : . : . : . : . : . :
rJMSF041O05- CTTCATCCCCCTTGTAGCAAGTTCTTCATCTGTCTCCCTAATGTCCTCCTTCCACAGAAT
rJMSF002P07- CTTCATCCCCCTTGTAGCAAGTTCTTCATCTGTCTCCCTAATGTCCTCCTTCCACAGAAT
rJMSF039C05- CTTCATCCCCCTTGTAGCAAGTTCTTCATCTGTCTCCCTAATGTCCTCCTTCCACAGAAT
____________________________________________________________
consensus CTTCATCCCCCTTGTAGCAAGTTCTTCATCTGTCTCCCTAATGTCCTCCTTCCACAGAAT
. : . : . : . : . : . :
rJMSF041O05- GTCATCATTATGTTCAATCAATGAGAAATCAATTGCTGGAAATTGAGGCTTATACTCGCT
rJMSF002P07- GTCATCATTATGTTCAATCAATGAGAAATCAATTGCTGGAAATTGAGGCTTATACTCGCT
rJMSF039C05- GTCATCATTATGTTCAATCAATGAGAAATCAATTGCTGGAAATTGAGGCTTATACTCGCT
____________________________________________________________
consensus GTCATCATTATGTTCAATCAATGAGAAATCAATTGCTGGAAATTGAGGCTTATACTCGCT
. : . : . : . : . : . :
rJMSF041O05- GATGTTTCTTCTTTTATCACACCAATGAACCCCTGTATGTTCTCGGCACAACTCCATAGC
rJMSF002P07- GATGTTTCTTCTTTTATCACACCAATGAACCCCTGTATGTTCTCGGCACAACTCCATAGC
rJMSF039C05- GATGTTTCTTCTTTTATCACACCAATGAACCCCTGTATGTTCTCGGCACAACTCCATAGC
JMSF039C05+ ACTCCATAGC
____________________________________________________________
consensus GATGTTTCTTCTTTTATCACACCAATGAACCCCTGTATGTTCTCGGCACAACTCCATAGC
. : . : . : . : . : . :
rJMSF041O05- CAGGAATG
rJMSF002P07- CAGGAATGGAGGGCAATTTAGACTTGAAATTGCAGGTCGACTACTGTTTCCAGCATTTGT
rJMSF039C05- CAGGAATGGAGGGCAATTTAGACTTGAAATTGCAGGTCGACTACTGTTTCCAGCATTTGT
JMSF039C05+ CAGGAATGGAGGGCAATTTAGACTTGAAATTGCAGGTCGACTACTGTTTCCAGCATTTGT
____________________________________________________________
consensus CAGGAATGGAGGGCAATTTAGACTTGAAATTGCAGGTCGACTACTGTTTCCAGCATTTGT
. : . : . : . : . : . :
rJMSF002P07- CACCATTAACGGAAGACCTTGTATGTCATCAGCATAGCCTTCTCCCC
rJMSF039C05- CACCATTAACGGAAGACCTTGTATGTCATCAGCATAGCCTTCTCCCCCAAAGACACCAAC
JMSF039C05+ CACCATTAACGGAAGACCTTGTATGTCATCAGCATAGCCTTCTCCCCCAAAGACACCAAC
____________________________________________________________
consensus CACCATTAACGGAAGACCTTGTATGTCATCAGCATAGCCTTCTCCCCCAAAGACACCAAC
. : . : . : . : . : . :
rJMSF039C05- TGCTGTTTGTATAGTCCTCAACAATGGGGAAGTGACA
JMSF039C05+ TGCTGTTTGTATAGTCCTCAACAATGGGGAAGTGACAACCAATTCGACCCTCTTAGAAAG
____________________________________________________________
consensus TGCTGTTTGTATAGTCCTCAACAATGGGGAAGTGACAACCAATTCGACCCTCTTAGAAAG
. : . : . : . : . : . :
JMSF039C05+ ACCGGATGAGTTAACATGTTTGCGTAGATTATCCACCTGCTGCCAACCAAGAGGGGTAAG
____________________________________________________________
consensus ACCGGATGAGTTAACATGTTTGCGTAGATTATCCACCTGCTGCCAACCAAGAGGGGTAAG
. : . : . : . : . : . :
JMSF039C05+ ATTTGCATCAAAAAGGTGTGGTAAGAGGTATGCATTGTTGTCCTTTTCTCCTTCTACATT
____________________________________________________________
consensus ATTTGCATCAAAAAGGTGTGGTAAGAGGTATGCATTGTTGTCCTTTTCTCCTTCTACATT
. : . : . : . : . : . :
JMSF039C05+ GTGAAATCCCTGAGCATGCCTCACCAGGTGGATCGTTTTACATCTGTGCAGAGGATAGAC
____________________________________________________________
consensus GTGAAATCCCTGAGCATGCCTCACCAGGTGGATCGTTTTACATCTGTGCAGAGGATAGAC
. : . : . : . : . : . :
JMSF002P07+ GCAGCGAGAGGCGGC
JMSF005L21+ CAGAGAAGAGAGAAGAAGAGCAGCGAGAGGCGGC
JMSF039C05+ ACTCTGACCCCCGGAGGCATCCATATCAGAGAAGAGAGAAGAAGAGCAGCGAGAGGCGGC
____________________________________________________________
consensus ACTCTGACCCCCGGAGGCATCCATATCAGAGAAGAGAGAAGAAGAGCAGCGAGAGGCGGC
. : . : . : . : . : . :
JMSF002P07+ GGAGCGAGAGCGAGACGGAAGAGAAACTACCGGAGAAGAGGAGCGTCGGAGTTGGAGGTG
JMSF005L21+ GGAGCGAGAGCGAGACGGAAGAGAAACTACCGGAGAAGAGGAGCGTCGGAGTTGGAGGTG
JMSF039C05+ GGAGCGAGAGCGAGACGGAAGAGAAACTACCGGAGAAGAGGAGCGTCGGAGTTGGAGGTG
____________________________________________________________
consensus GGAGCGAGAGCGAGACGGAAGAGAAACTACCGGAGAAGAGGAGCGTCGGAGTTGGAGGTG
. : . : . : . : . : . :
JMSF002P07+ GAGGTGCGTTGACGTTCTGGAGCGGAGGTTCGGAGTGAGAGCAATAGCGGTAGAATCAGA
JMSF005L21+ GAGGTGCGTTGACGTTCTGGAGCGGAGGTTCGGAGTGAGAGCAATAGCGG
JMSF039C05+ GAGGTGCGTTGACGTTCTGGAGCGGAGGTTCGGAGTGAGAGCAATAGCGGTAGAATCAGA
____________________________________________________________
consensus GAGGTGCGTTGACGTTCTGGAGCGGAGGTTCGGAGTGAGAGCAATAGCGGTAGAATCAGA
. : . : . : . : . : . :
JMSF002P07+ ATAGTTCCGGAATAGGAATTGCACTTTTCCAAATTGAAAATATAATAAACAATTGGCGAC
JMSF039C05+ ATAGTTCCGGAATAGGAATTGCACTTTTCCAAATTGAAAATATAATAAACAATTGGCGAC
____________________________________________________________
consensus ATAGTTCCGGAATAGGAATTGCACTTTTCCAAATTGAAAATATAATAAACAATTGGCGAC
. : . : . : . : . : . :
JMSF002P07+ ACTATCTGTCATAGCGGCAGCCGGATCTGCGTTTCAGTTTTTGTCTCAGTTTAGTC
JMSF039C05+ ACTATCTGTCATAGCGGCAGCCGGATCTGCGTTTCAGTTTTTGTCTCAGTTTAGTCACCC
____________________________________________________________
consensus ACTATCTGTCATAGCGGCAGCCGGATCTGCGTTTCAGTTTTTGTCTCAGTTTAGTCACCC