Contig 006634:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040N20Sequence288006634 (6)ref|XP_010101382.1|2e-04Protein IQ-DOMAIN 14 [Morus notabilis] gb|EXB88329.1| Protein IQ-DOMAIN 14 [Moru489001267 (6)emb|CDP10875.1|9e-49unnamed protein product [Coffea canephora]
JMSF002M08Sequence227006634 (6)707001267 (6)emb|CDP10875.1|3e-64unnamed protein product [Coffea canephora]
JMSF013J03Sequence248006634 (6)745001267 (6)emb|CDP10875.1|2e-68unnamed protein product [Coffea canephora]
JMSF017P04Sequence489006634 (6)ref|XP_006366143.1|5e-26PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]745001267 (6)emb|CDP10875.1|2e-68unnamed protein product [Coffea canephora]
JMSF038H06Sequence683006634 (6)ref|XP_006366143.1|2e-28PREDICTED: protein IQ-DOMAIN 14-like [Solanum tuberosum]886001267 (6)emb|CDP10875.1|5e-80unnamed protein product [Coffea canephora]
JMSF050D11Sequence701006634 (6)ref|XP_004244759.1|2e-16PREDICTED: protein IQ-DOMAIN 14 [Solanum lycopersicum]727001267 (6)emb|CDP10875.1|2e-68unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF050D11+                 ACGAGGATAATCCCGGGGAGAAGTAGCTCTTGGTGAAATGATCCGTGGAGAGGC
                      ____________________________________________________________
consensus                   ACGAGGATAATCCCGGGGAGAAGTAGCTCTTGGTGAAATGATCCGTGGAGAGGC
 
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JMSF050D11+           TGGCCTCCCGGATGAAAATCTGGGCTGTTCAGAGGAGAGAGGAATAAGTAGTCTCTGCTC
                      ____________________________________________________________
consensus             TGGCCTCCCGGATGAAAATCTGGGCTGTTCAGAGGAGAGAGGAATAAGTAGTCTCTGCTC
 
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JMSF050D11+           ATCTGCCTCCCCCAATATCTTCTCAATACTGCTCGGTTCTCTGAAGAGTGGAATAAATGA
                      ____________________________________________________________
consensus             ATCTGCCTCCCCCAATATCTTCTCAATACTGCTCGGTTCTCTGAAGAGTGGAATAAATGA
 
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JMSF050D11+           TTTGCTCTCTCCATGTTTTAGTACTCTTCCCTTCTTTTCCTTAGAATTTTTCTTCTCTGA
                      ____________________________________________________________
consensus             TTTGCTCTCTCCATGTTTTAGTACTCTTCCCTTCTTTTCCTTAGAATTTTTCTTCTCTGA
 
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JMSF050D11+           TGCCTGACAAATTTTAAAACACTAAGGTAATGGAAAGGTAGCAGCAGAGATCGATCGAGA
                      ____________________________________________________________
consensus             TGCCTGACAAATTTTAAAACACTAAGGTAATGGAAAGGTAGCAGCAGAGATCGATCGAGA
 
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JMSF050D11+           GCATATATATAAATGCTCATCTGTATTATTTAGACAGAATGGAAGCATTTTCAAGATTAT
                      ____________________________________________________________
consensus             GCATATATATAAATGCTCATCTGTATTATTTAGACAGAATGGAAGCATTTTCAAGATTAT
 
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JMFF040N20+                                                                 TCTTTT
JMSF050D11+           CAAAGCAAGGGGTTTCCTCAAAATTTACAGATTTCTATGACGAGTAAACTATCAATCCTG
                      ____________________________________________________________
consensus             CAAAGCAAGGGGTTTCCTCAAAATTTACAGATTTCTATGACGAGTAAACTATCATTTTTT
 
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JMFF040N20+           CCTTAGAATTTTTCTTCTCTGATGCATGAATTTGCTNATCCTNGGAAGNGTTGGGTGTGA
JMSF050D11+           CCTGTCAAGAAAACGCTTCCCTTACATGAATTTGCTTATCCTTGGAAGTGTTGGGTGTGA
JMSF017P04+                                   CATGAATTTGCTTATCCTTGGAAGTGTTGGGTGTGA
JMSF038H06+                                   CATGAATTTGCTTATCCTTGGAAGTGTTGGGTGTGA
                      ____________________________________________________________
consensus             CCTTTGAATTTTTCTTTTCTGTTGCATGAATTTGCTTATCCTTGGAAGTGTTGGGTGTGA
 
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JMFF040N20+           AAACTCTTTTGATGGCAGAAAACCAACTGCCTTTCTTACCCATGTTCCTTGCATTAGTAT
JMSF050D11+           AAACTCTTTTGATGGCAGAAAACCAACTGCCTTTCTTACCCATGTTCCTTGCATTAGTAT
JMSF017P04+           AAACTCTTTTGATGGCAGAAAACCAACTGCCTTTCTTACCCATGTTCCTTGCATTAGTAT
JMSF002M08+                                ACCAACTGCCTTTCTTACCCATGTTCCTTGCATTAGTAT
JMSF038H06+           AAACTCTTTTGATGGCAGAAAACCAACTGCCTTTCTTACCCATGTTCCTTGCATTAGTAT
                      ____________________________________________________________
consensus             AAACTCTTTTGATGGCAGAAAACCAACTGCCTTTCTTACCCATGTTCCTTGCATTAGTAT
 
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JMFF040N20+           TTCACCCTCTCAAGTGTTTTTTTGCCCATCTTCCATAACCCTTTGAAGAAATTAAAGCTG
JMSF050D11+           TTCACCCTCTCAAGTGTTTTTTTGCCCATCTTCCATAACCCTTTGAAGAAATTAAAGCTG
JMSF017P04+           TTCACCCTCTCAAGTGTTTTTTTGCCCATCTTCCATAACCCTTTGAAGAAATTAAAGCTG
JMSF002M08+           TTCACCCTCTCAAGTGTTTTTTTGCCCATCTTCCATAACCCTTTGAAGAAATTAAAGCTG
JMSF013J03+                            TTTTTTGCCCATCTTCCATAACCC-TTGAAGAAATTAAAGCTG
JMSF038H06+           TTCACCCTCTCAAGTGTTTTTTTGCCCATCTTCCATAACCCTTTGAAGAAATTAAAGCTG
                      ____________________________________________________________
consensus             TTCACCCTCTCAAGTGTTTTTTTGCCCATCTTCCATAACCCTTTGAAGAAATTAAAGCTG
 
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JMFF040N20+           CAATCAACCCAAAAGCACAATTCAACTCAGTTTTCTGTCTACCTCTTTCTTTCTTTCTTT
JMSF050D11+           CAATCAACCCAAAAGCACAATTCAACTCAGTTTTCTGTCTACCTCTTTCTTTCTTTCTTT
JMSF017P04+           CAATCAACCCAAAAGCACAATTCAACTCAGTTTTCTGTCTACCTCTTTCTTTCTTTCTTT
JMSF002M08+           CAATCAACCCAAAAGCACAATTCAACTCAGTTTTCTGTCTACCTCTTTCTTTCTTTCTTT
JMSF013J03+           CAATCAACCCAAAAGCACAATTCAACTCAGTTTTCTGTCTACCTCTTTCTTTCTTTCTTT
JMSF038H06+           CAATCAACCCAAAAGCACAATTCAACTCAGTTTTCTGTCTACCTCTTTCTTTCTTTCTTT
                      ____________________________________________________________
consensus             CAATCAACCCAAAAGCACAATTCAACTCAGTTTTCTGTCTACCTCTTTCTTTCTTTCTTT
 
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JMFF040N20+           CTCTCTCTCTCTCTCAAGAATTCTTTTTCCCTTTCTCTTTCT                  
JMSF050D11+           CTCTCTCTCTCTCTCAAGAATTCTTTTTCCCTTTCTCTTTCTAGCC              
JMSF017P04+           CTCTCTCTCTCTCTCAAGAATTCTTTTTCCCTTTCTCTTTCTAGCCGACCTCTGCTTTGC
JMSF002M08+           CTCTCTCTCTCTCTCAAGAATTCTTTTTCCCTTTCTCTTTCTAGCCGACCTCTGCTTTGC
JMSF013J03+           CTCTCTCTCTCTCTCAAGAATTCTTTTTCCCTTTCTCTTTCTAGCCGACCTCTGCTTTGC
JMSF038H06+           CTCTCTCTCTCTCTCAAGAATTCTTTTTCCCTTTCTCTTTCTAGCCGACCTCTGCTTTGC
                      ____________________________________________________________
consensus             CTCTCTCTCTCTCTCAAGAATTCTTTTTCCCTTTCTCTTTCTAGCCGACCTCTGCTTTGC
 
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JMSF017P04+           TAGCACT                                                     
JMSF002M08+           TAGCACT                                                     
JMSF013J03+           TAGCACTGGTATACAATGTTAGCATGACATCTTTAGAAATTCCTGGGTTCAAACTTGGCT
JMSF038H06+           TAGCACTGGTATACAATGTTAGCANGACATCTTTAGAAATTCCTGGGTTCAAACTTGGCT
                      ____________________________________________________________
consensus             TAGCACTGGTATACAATGTTAGCATGACATCTTTAGAAATTCCTGGGTTCAAACTTGGCT
 
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JMSF013J03+           AACTACCTTTTTTCTTTTCTTCCTT                                   
JMSF038H06+           AACTACCTTTTTTCTTTTCTTCCTTGAATTTGATTCTTTGTTGCTTGCAAGGCTATATTT
                      ____________________________________________________________
consensus             AACTACCTTTTTTCTTTTCTTCCTTGAATTTGATTCTTTGTTGCTTGCAAGGCTATATTT
 
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JMSF038H06+           TTCTTATTTGTNTTATGTCTGCTATTATTACCCCTCTTTTTCCCATTCTCCTAACTTTCC
                      ____________________________________________________________
consensus             TTCTTATTTGTNTTATGTCTGCTATTATTACCCCTCTTTTTCCCATTCTCCTAACTTTCC