Contig 006632:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF015N22+                                                     TCTTGAGGATCCATGCAA
                      ____________________________________________________________
consensus                                                       TCTTGAGGATCCATGCAA
 
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JMSF015N22+           TTTCCACGCGAGAAAGCTACGGCGGCGCAGGCTAAATAGAGACGACTTTTGAGGAATGTC
                      ____________________________________________________________
consensus             TTTCCACGCGAGAAAGCTACGGCGGCGCAGGCTAAATAGAGACGACTTTTGAGGAATGTC
 
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JMSF015N22+           TGATAGTCCTCTGAACCAATGGGAACGTTAGCGGCAGGTCCCGCACCCAACGACGTCGTC
                      ____________________________________________________________
consensus             TGATAGTCCTCTGAACCAATGGGAACGTTAGCGGCAGGTCCCGCACCCAACGACGTCGTC
 
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JMSF015N22+           TTCGCGGTTTCCGTCGCCGACTCTGCCCCGGAGCTCTCGTGACCGAAGTTCACATCCCGA
JMSF038C16+                               CTCTGCCCCGGAGCTCTCGTGACCGAAGTTCACATCCCGA
                      ____________________________________________________________
consensus             TTCGCGGTTTCCGTCGCCGACTCTGCCCCGGAGCTCTCGTGACCGAAGTTCACATCCCGA
 
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JMSF015N22+           TCAGCTCCGAGATTCCGATCCGAAATCTCGACGACGTCGTTCTGTGGCAACCGCTGCCGA
JMSF038C16+           TCAGCTCCGAGATTCCGATCCGAAATCTCGACGACGTCGTTCTGTGGCAACCGCTGCCGA
                      ____________________________________________________________
consensus             TCAGCTCCGAGATTCCGATCCGAAATCTCGACGACGTCGTTCTGTGGCAACCGCTGCCGA
 
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JMSF015N22+           CCAGAGGCAGCAGGAGCAGAAGTAGAAGAACAAGAAGCAGGAGGTGAAGAAGACAAAGTG
JMSF003B08+              GAGGCAGCAGGAGCAGAAGTAGAAGAACAAGAAGCAGGAGGTGAAGAAGACAAAGTG
JMSF038C16+           CCAGAGGCAGCAGGAGCAGAAGTAGAAGAACAAGAAGCAGGAGGTGAAGAAGACAAAGTG
                      ____________________________________________________________
consensus             CCAGAGGCAGCAGGAGCAGAAGTAGAAGAACAAGAAGCAGGAGGTGAAGAAGACAAAGTG
 
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JMSF015N22+           TGATCAACGGAGGCGGTGGCTTCCTGGAGGAAGCGCTGGAAGGCATACTCGGAGGGGCTA
JMSF003B08+           TGATCAACGGAGGCGGTGGCTTCCTGGAGGAAGCGCTGGAAGGCATACTCGGAGGGGCTA
JMSF038C16+           TGATCAACGGAGGCGGTGGCTTCCTGGAGGAAGCGCTGGAAGGCATACTCGGAGGGGCTA
                      ____________________________________________________________
consensus             TGATCAACGGAGGCGGTGGCTTCCTGGAGGAAGCGCTGGAAGGCATACTCGGAGGGGCTA
 
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JMSF015N22+           CGGCTCATCATCATCTTGTCCGGCGGCAGCGGCA--GGCGGCGGCATGAACTTGTCGACA
JMSF003B08+           CGGCTCATCATCATCTTGTCCGGCGGCAGCGGCAGCGGCGGCGGCATGAACTTGTCGACA
JMSF038C16+           CGGCTCATCATCATCTTGTCCGGCGGCAGCGGCAGCGGCGGCGGCATGAACTTGTCGACA
                      ____________________________________________________________
consensus             CGGCTCATCATCATCTTGTCCGGCGGCAGCGGCAGCGGCGGCGGCATGAACTTGTCGACA
 
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JMSF015N22+           TTCTCGCCCACTGTGAGAACCTTATCCATTTCCAATTTTCCCTACTACGCAGAACTGAAG
JMSF003B08+           TTCTCGCCCACTGTGAGAACCTTATCCATTTCCAATTTTCCCTACTACGCAGAACTGAAG
JMSF038C16+           TTCTCGCCCACTGTGAGAACCTTATCCATTTCCAATTTTCCCTACTACGCAGAACTGAAG
                      ____________________________________________________________
consensus             TTCTCGCCCACTGTGAGAACCTTATCCATTTCCAATTTTCCCTACTACGCAGAACTGAAG
 
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JMSF015N22+           AT                                                          
JMSF003B08+           AT                                                          
JMSF038C16+           ATGATTTTTCCGAATCCCAGGATTTGTCAGCTTATATCTGCTCCGTCCGGTCCTTTGACA
                      ____________________________________________________________
consensus             ATGATTTTTCCGAATCCCAGGATTTGTCAGCTTATATCTGCTCCGTCCGGTCCTTTGACA
 
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JMSF038C16+           GTGACGCACAATGGCAATAGTGGATTCACCACCCTAATCTCCCATAAATATTTCAACAGC
                      ____________________________________________________________
consensus             GTGACGCACAATGGCAATAGTGGATTCACCACCCTAATCTCCCATAAATATTTCAACAGC
 
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JMSF038C16+           TCTACTCCTAACTCCTAAGTCCTAACACAGTTGATAGCAGCGACAAAGAGCCCTAGTTAG
                      ____________________________________________________________
consensus             TCTACTCCTAACTCCTAAGTCCTAACACAGTTGATAGCAGCGACAAAGAGCCCTAGTTAG
 
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JMSF038C16+           TCGGTTGATGATGGGATTAATTTAATAAAATTTCAATTCCCATGATTGTCGGAAGAAATT
                      ____________________________________________________________
consensus             TCGGTTGATGATGGGATTAATTTAATAAAATTTCAATTCCCATGATTGTCGGAAGAAATT
 
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JMSF038C16+           GAAGAAAGAATCAATGCTCCAAATCATCCATTTGGACATTTGGAATGAAATGCTAACATC
                      ____________________________________________________________
consensus             GAAGAAAGAATCAATGCTCCAAATCATCCATTTGGACATTTGGAATGAAATGCTAACATC