Contig 006627:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF037K12Sequence554006627 (2)ref|XP_007209801.1|4e-05hypothetical protein PRUPE_ppa014016mg [Prunus persica] gb|EMJ11000.1| hypotheti498006627 (2)ref|XP_007209801.1|3e-05hypothetical protein PRUPE_ppa014016mg [Prunus persica] gb|EMJ11000.1| hypotheti

Alignment

This contig is upended


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rJMSF037K12+                                                        GAGTCGTTATTTTG
JMSF037K12-                                                         GAGTCGTTATTTTG
                      ____________________________________________________________
consensus                                                           GAGTCGTTATTTTG
 
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rJMSF037K12+          CTAATAACTAACCACCCTCTCCCAACACTCAACCACTAAACATATTTACCCTTTCCGATC
JMSF037K12-           CTAATAACTAACCACCCTCTCCCAACACTCAACCACTAAACATATTTACCCTTTCCGATC
                      ____________________________________________________________
consensus             CTAATAACTAACCACCCTCTCCCAACACTCAACCACTAAACATATTTACCCTTTCCGATC
 
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rJMSF037K12+          ATCTCTCCCATCAATCAATCCCCGACCAGCAGAAATTAAGATGGGAAATTGCATGGACAA
JMSF037K12-           ATCTCTCCCATCAATCAATCCCCGACCAGCAGAAATTAAGATGGGAAATTGCATGGACAA
                      ____________________________________________________________
consensus             ATCTCTCCCATCAATCAATCCCCGACCAGCAGAAATTAAGATGGGAAATTGCATGGACAA
 
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rJMSF037K12+          AACCTCGGAATTTCCGAAGCAAGAACAACCTAGGAATAACAGGAGGGTAAAGGTTGTGGT
JMSF037K12-           AACCTCGGAATTTCCGAAGCAAGAACAACCTAGGAATAACAGGAGGGTAAAGGTTGTGGT
                      ____________________________________________________________
consensus             AACCTCGGAATTTCCGAAGCAAGAACAACCTAGGAATAACAGGAGGGTAAAGGTTGTGGT
 
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rJMSF037K12+          GAGGAAGGAGGAGTTGGAGTGGGTGCTCTCGCAGGTGAAGCTCCGACAGGGAAGAACAAC
JMSF037K12-           GAGGAAGGAGGAGTTGGAGTGGGTGCTCTCGCAGGTGAAGCTCCGACAGGGAAGAACAAC
                      ____________________________________________________________
consensus             GAGGAAGGAGGAGTTGGAGTGGGTGCTCTCGCAGGTGAAGCTCCGACAGGGAAGAACAAC
 
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rJMSF037K12+          ATCATTGGAAGATGTGTTGGAAGAACTGGAGAGATGCAGAGGAAAGGCGGCGGCAAAAGC
JMSF037K12-           ATCATTGGAAGATGTGTTGGAAGAACTGGAGAGATGCAGAGGAAAGGCGGCGGCAAAAGC
                      ____________________________________________________________
consensus             ATCATTGGAAGATGTGTTGGAAGAACTGGAGAGATGCAGAGGAAAGGCGGCGGCAAAAGC
 
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rJMSF037K12+          TTCAGTTTCTGCTACGACATGGAAGCCTTCTCTTGAAGTCATAACTGAGAGCCCGGAATT
JMSF037K12-           TTCAGTTTCTGCTACGACATGGAAGCCTTCTCTTGAAGTCATAACTGAGAGCCCGGAATT
                      ____________________________________________________________
consensus             TTCAGTTTCTGCTACGACATGGAAGCCTTCTCTTGAAGTCATAACTGAGAGCCCGGAATT
 
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rJMSF037K12+          GCATGAGGTGATGGATAAATCATAGATGAATGATGAATCTGTTGTAGTAGTGATATGATC
JMSF037K12-           GCATGAGGTGATGGATAAATCATAGATGAATGATGAATCTGTTGTAGTAGTGATATGATC
                      ____________________________________________________________
consensus             GCATGAGGTGATGGATAAATCATAGATGAATGATGAATCTGTTGTAGTAGTGATATGATC
 
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rJMSF037K12+          ATCATCAACTCCTTTAGTTTCGAGTTAGCTAAGGTGTAAGTTTGTTGTTGTAAATTATGG
JMSF037K12-           ATCATCAACTCCTTTAGTTTCGAGTTAGCTAAGGTGTAAGTTTGTTGTTGTAAATTATGG
                      ____________________________________________________________
consensus             ATCATCAACTCCTTTAGTTTCGAGTTAGCTAAGGTGTAAGTTTGTTGTTGTAAATTATGG
 
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rJMSF037K12+          TTTA                                                        
JMSF037K12-           TTTATGTCCCTTTTCAACACTAAATTCAATAAATAGAACATGTATGTTCCAAAAAAAAAA
                      ____________________________________________________________
consensus             TTTATGTCCCTTTTCAACACTAAATTCAATAAATAGAACATGTATGTTCCAAAAAAAAAA