Contig 006624:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS010C07Sequence468006624 (3)ref|XP_009799953.1|2e-32PREDICTED: microtubule-associated protein TORTIFOLIA1 [Nicotiana sylvestris]
JMFS048B10Sequence571006624 (3)gb|KGN58001.1|1e-38hypothetical protein Csa_3G426380 [Cucumis sativus]
JMSF037D04Sequence576006624 (3)ref|XP_004248290.1|1e-58PREDICTED: microtubule-associated protein TORTIFOLIA1 [Solanum lycopersicum]702020466emb|CBI26604.3|3e-95unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFS010C07+                                          CTGCCAGCAGAGAGAGCCAATGGCGTCAC
JMFS048B10+                         GCATCCCCCTTAAGCTGCTGCCAGCAGAGAGAGCCAAGAGCGTCAC
JMSF037D04+                                                  AGAGAGAGCCAATGGCGTCAC
                      ____________________________________________________________
consensus                           GCATCCCCCTTAAGCTGCTGCCAGCAGAGAGAGCCAATGGCGTCAC
 
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JMFS010C07+           GGCACGCGTCCCTAACGACCGAATCGGAGTCCTTGAGCCTCTTGACGATATGCGCAATGA
JMFS048B10+           GGCACGCGTCCCTAGCGACCGAATCAGAGTCCTTGAGCCTATCGGCCATATGCGCGAGGA
JMSF037D04+           GGCACGCGTCCCTGACGGCCGAATCGGAGTCCTTGAGCCTCTTGACGATATGCGCAATGA
                      ____________________________________________________________
consensus             GGCACGCGTCCCTAACGACCGAATCGGAGTCCTTGAGCCTCTTGACGATATGCGCAATGA
 
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JMFS010C07+           TGTTGGTCAAATGAGAGGCAGGTGGAATCGGCGTGGTCGGCACATAGAACGGCGAGAAGG
JMFS048B10+           TGTCGGTCTAATGAAAGGC-GGTGGAATCGGCGTGGTCGGCACATAGAACGCCGACAAGG
JMSF037D04+           TCTTGGTCAAATGAGAGGC-GGTGGAATCGGCGTGGGCGGCACAGAGGACGGCGAGGAGG
                      ____________________________________________________________
consensus             TGTTGGTCAAATGAGAGGC-GGTGGAATCGGCGTGGTCGGCACATAGAACGGCGAGAAGG
 
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JMFS010C07+           CGCAGGCTCTCATTCTTGACGGCAGGCTTGGAGTCATTGCCGGCGTGGTATAGCCAGTTA
JMFS048B10+           AGCAGGCTCTCATTCTTGACGGCAGGCTCGGAGTCATGGCCGGCCTGGTATAGCCAGTTA
JMSF037D04+           CGGAGGCTCTCCTTCTTGACGGCAGGCTTGGAGTCATTGGCGGCGTCGTAGAGGCAGTTG
                      ____________________________________________________________
consensus             CGCAGGCTCTCATTCTTGACGGCAGGCTTGGAGTCATTGCCGGCGTGGTATAGCCAGTTA
 
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JMFS010C07+           AGGAACATGGGGACACCGTCGTGGGAAAGGTGTGTGGATGATCTTCTCGAGGTCCTCCCC
JMFS048B10+           AGGAACATGGGGACACCGTCGTGGGAAAGG-GTGTGGATGATCTTCTTGAGGCCGTCCAC
JMSF037D04+           AGGAACATGGGGACGCCGTCGTGGGAGAGG-GTGTGGATGATCTTCTCGAGGTCCTCCAC
                      ____________________________________________________________
consensus             AGGAACATGGGGACACCGTCGTGGGAAAGG-GTGTGGATGATCTTCTCGAGGTCCTCCAC
 
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JMFS010C07+           GGCGATCTGGTGGGTGTCCCGGTCGGAGCAGCTTGCCAGCGAGGTCAGGATTCGATGCTT
JMFS048B10+           GGCGATCTGGTGGGTGTCGCGGTGGGAGAGCTTGGACAGCGAGGTCAGGATTCGATGCTT
JMSF037D04+           GGCGATCTGGTGGGTGTCGCGGTCGGAGAGCTTGGAAAGCGAGGTCAGGATTCGCTGCTT
                      ____________________________________________________________
consensus             GGCGATCTGGTGGGTGTCGCGGTCGGAGAGCTTGGACAGCGAGGTCAGGATTCGATGCTT
 
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JMFS010C07+           AAGCTCC                                                     
JMFS048B10+           GAGCTCCACCA                                                 
JMSF037D04+           GAGCTCCACCATTGCCAAGTGGGAAGATAGTGAAGAAGTCGAAGATCTTAAAGGTGCTGT
                      ____________________________________________________________
consensus             GAGCTCCACCATTGCCAAGTGGGAAGATAGTGAAGAAGTCGAAGATCTTAAAGGTGCTGT
 
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JMSF037D04+           GGTGGGTTGGTTTGGGGGTTTAGAGGGTTTTGAAGATTTGATTCCTGAACTCATTTTGGA
                      ____________________________________________________________
consensus             GGTGGGTTGGTTTGGGGGTTTAGAGGGTTTTGAAGATTTGATTCCTGAACTCATTTTGGA
 
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JMSF037D04+           TTTTCTGCAATCTAACTATTCCAGATTTCTTTCTTCTTCTTCTTCTTCTTCAGAATGCAA
                      ____________________________________________________________
consensus             TTTTCTGCAATCTAACTATTCCAGATTTCTTTCTTCTTCTTCTTCTTCTTCAGAATGCAA
 
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JMSF037D04+           GTGAAGAAGTTTGAGAAAAACAATGGAAGTTGATGTGGGGTTGCTCTTGCTCCCAACACC
                      ____________________________________________________________
consensus             GTGAAGAAGTTTGAGAAAAACAATGGAAGTTGATGTGGGGTTGCTCTTGCTCCCAACACC