Contig 006609:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF035C20+                                                GCTCGTTCCACCTCCCCTAATT
JMSF035C20-                                                 GCTCGTTCCACCTCCCCTAATT
                      ____________________________________________________________
consensus                                                   GCTCGTTCCACCTCCCCTAATT
 
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rJMSF035C20+          GTTTTCCTAAGCCGCAGACGCCCTGACCTAGTCTATCACCTCTTCCTTCAGATTGTCGCA
JMSF035C20-           GTTTTCCTAAGCCGCAGACGCCCTGACCTAGTCTATCACCTCTTCCTTCAGATTGTCGCA
                      ____________________________________________________________
consensus             GTTTTCCTAAGCCGCAGACGCCCTGACCTAGTCTATCACCTCTTCCTTCAGATTGTCGCA
 
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rJMSF035C20+          ACTCGCAAGTCGTCGTCGCCGCTTCCAGACCGCCATCGCCACCTCCAGACCGCCATCGCC
JMSF035C20-           ACTCGCAAGTCGTCGTCGCCGCTTCCAGACCGCCATCGCCACCTCCAGACCGCCATCGCC
                      ____________________________________________________________
consensus             ACTCGCAAGTCGTCGTCGCCGCTTCCAGACCGCCATCGCCACCTCCAGACCGCCATCGCC
 
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rJMSF035C20+          ACCTCCAGACATCCATCGCCAGTTGCCCAGTTCGCCACACAGCTTCGTTCGTTCGTCGCA
JMSF035C20-           ACCTCCAGACATCCATCGCCAGTTGCCCAGTTCGCCACACAGCTTCGTTCGTTCGTCGCA
                      ____________________________________________________________
consensus             ACCTCCAGACATCCATCGCCAGTTGCCCAGTTCGCCACACAGCTTCGTTCGTTCGTCGCA
 
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rJMSF035C20+          AGCAGCCATCGCCACCTCCGACGCCTTCCCCTTCGCAGCACGGCTGTTTTTTGTGTTGTC
JMSF035C20-           AGCAGCCATCGCCACCTCCGACGCCTTCCCCTTCGCAGCACGGCTGTTTTTTGTGTTGTC
                      ____________________________________________________________
consensus             AGCAGCCATCGCCACCTCCGACGCCTTCCCCTTCGCAGCACGGCTGTTTTTTGTGTTGTC
 
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rJMSF035C20+          ACTTGATAGTGGAGAAGGTGCACCAAATAAGTGCTTAGTACAGGATAGCAGAAAACTTAG
JMSF035C20-           ACTTGATAGTGGAGAAGGTGCACCAAATAAGTGCTTAGTACAGGATAGCAGAAAACTTAG
                      ____________________________________________________________
consensus             ACTTGATAGTGGAGAAGGTGCACCAAATAAGTGCTTAGTACAGGATAGCAGAAAACTTAG
 
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rJMSF035C20+          AGAAAATTGGGGAAAGATGTGCAATTGCCTGTCCCTCCTAAGGGAAAGAAAAGGGCTAAG
JMSF035C20-           AGAAAATTGGGGAAAGATGTGCAATTGCCTGTCCCTCCTAAGGGAAAGAAAAGGGCTAAG
                      ____________________________________________________________
consensus             AGAAAATTGGGGAAAGATGTGCAATTGCCTGTCCCTCCTAAGGGAAAGAAAAGGGCTAAG
 
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rJMSF035C20+          ACAGTAAGAGAGAAGCTGTTTGCCAGTGATCTGTATGCAGCTCACATTGAGAGTATATAG
JMSF035C20-           ACAGTAAGAGAGAAGCTGTTTGCCAGTGATCTGTATGCAGCTCACATTGAGAGTATATAG
                      ____________________________________________________________
consensus             ACAGTAAGAGAGAAGCTGTTTGCCAGTGATCTGTATGCAGCTCACATTGAGAGTATATAG
 
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rJMSF035C20+          AAAGT                                                       
JMSF035C20-           AAAGTTGTAGACGGTACTTACCGGTTCAAGGCTCATTGGTATATTATTCCAAAAAAAAAA
                      ____________________________________________________________
consensus             AAAGTTGTAGACGGTACTTACCGGTTCAAGGCTCATTGGTATATTATTCCAAAAAAAAAA