Contig 006606:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034O01Sequence699006606 (2)gb|EYU29572.1|1e-115hypothetical protein MIMGU_mgv1a003685mg [Erythranthe guttata]743002950 (2)ref|XP_009782194.1|4e-105PREDICTED: probable phenylalanine--tRNA ligase beta subunit [Nicotiana sylvestr
JMSF040B12Sequence699006606 (2)gb|EYU31225.1|2e-114hypothetical protein MIMGU_mgv1a003667mg [Erythranthe guttata]799002950 (2)ref|XP_009782194.1|2e-112PREDICTED: probable phenylalanine--tRNA ligase beta subunit [Nicotiana sylvestr

Alignment

This contig is upended


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JMSF040B12+                                TTCAGATCATGCTCTCTGTAATATTCCATCAGCTTATCA
JMSF034O01+                                TTCAGATCATGCTCTCTGTAATATTCCATCAGCTTATCA
                      ____________________________________________________________
consensus                                  TTCAGATCATGCTCTCTGTAATATTCCATCAGCTTATCA
 
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JMSF040B12+           GCTCTGAAACTTTCTTTCTGTTTCAACGGAACAAAGTTGATTTCTGAGGGAGGCAAAGCC
JMSF034O01+           GCTCTGAAACTTTCTTTCTGTTTCAACGGAACAAAGTTGATTTCTGAGGGAGGCAAAGCC
                      ____________________________________________________________
consensus             GCTCTGAAACTTTCTTTCTGTTTCAACGGAACAAAGTTGATTTCTGAGGGAGGCAAAGCC
 
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JMSF040B12+           TCATATGTGAAAGGGGATTGTATTGTATCCAAGTCATGAGTTCCAATAGCAACCAAGGTT
JMSF034O01+           TCATATGTGAAAGGGGATTGTATTGTATCCAAGTCATGAGTTCCAATAGCAACCAAGGTT
                      ____________________________________________________________
consensus             TCATATGTGAAAGGGGATTGTATTGTATCCAAGTCATGAGTTCCAATAGCAACCAAGGTT
 
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JMSF040B12+           CTTCGCCGGCAAATGTTCTGATGAAGTCGATCTTGTAGATCAATAAAGCTATTATATCTT
JMSF034O01+           CTTCGCCGGCAAATGTTCTGATGAAGTCGATCTTGTAGATCAATAAAGCTATTATATCTT
                      ____________________________________________________________
consensus             CTTCGCCGGCAAATGTTCTGATGAAGTCGATCTTGTAGATCAATAAAGCTATTATATCTT
 
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JMSF040B12+           GCTTCATCAAAAGTTACACCTCTTAAAACAGCACAGACAACAAACTGTCGGATCTTTGAA
JMSF034O01+           GCTTCATCAAAAGTTACACCTCTTAAAACAGCACAGACAACAAACTGTCGGATCTTTGAA
                      ____________________________________________________________
consensus             GCTTCATCAAAAGTTACACCTCTTAAAACAGCACAGACAACAAACTGTCGGATCTTTGAA
 
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JMSF040B12+           GTCTCAGGCTTGACGTGCATTTTCAGCATGGATTCTTCACTGATATTTGCAACCTTATAT
JMSF034O01+           GTCTCAGGCTTGACGTGCATTTTCAGCATGGATTCTTCACTGATATTTGCAACCTTATAT
                      ____________________________________________________________
consensus             GTCTCAGGCTTGACGTGCATTTTCAGCATGGATTCTTCACTGATATTTGCAACCTTATAT
 
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JMSF040B12+           GTAGGTATTGGATCAAGCCCATTAAAAATGCGAAGGGCTTGAACTAGCCCCTCGAGGCAA
JMSF034O01+           GTAGGTATTGGATCAAGCCCATTAAAAATGCGAAGGGCTTGAACTAGCCCCTCGAGGCAA
                      ____________________________________________________________
consensus             GTAGGTATTGGATCAAGCCCATTAAAAATGCGAAGGGCTTGAACTAGCCCCTCGAGGCAA
 
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JMSF040B12+           AGTAAATCATACCTGTTAGCGGGAATATCAATCTTGTATATAATTTCCTCATCTTCAGAT
JMSF034O01+           AGTAAATCATACCTGTTAGCGGGAATATCAATCTTGTATATAATTTCCTCATCTTCAGAT
                      ____________________________________________________________
consensus             AGTAAATCATACCTGTTAGCGGGAATATCAATCTTGTATATAATTTCCTCATCTTCAGAT
 
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JMSF040B12+           GTTTCTTCGTCCTCCAAATGCTGTTCTTTCCGTTTAATTGCCTTCTCTGTCGTGACATCA
JMSF034O01+           GTTTCTTCGTCCTCCAAATGCTGTTCTTTCCGTTTAATTGCCTTCTCTGTCGTGACATCA
                      ____________________________________________________________
consensus             GTTTCTTCGTCCTCCAAATGCTGTTCTTTCCGTTTAATTGCCTTCTCTGTCGTGACATCA
 
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JMSF040B12+           TCGAGCTCAATTCCAAACTTGAAGCACAATTCTTCAGATTCTTCTTCGGTGTAAGTGCGA
JMSF034O01+           TCGAGCTCAATTCCAAACTTGAAGCACAATTCTTCAAATTCTTCTTCGGTGTAAGTGCGA
                      ____________________________________________________________
consensus             TCGAGCTCAATTCCAAACTTGAAGCACAATTCTTCAGATTCTTCTTCGGTGTAAGTGCGA
 
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JMSF040B12+           CCGAGAGCTTCAAAGAGCCGATCTCTTCCAACGCTAACGGTGGGCATGGCGGCGGCAAAA
JMSF034O01+           CCGAGAGCTTCAAAGAGCCGATCTCTTCCAACGCTAACGGTGGGCATGGCGGCGGCAAAA
                      ____________________________________________________________
consensus             CCGAGAGCTTCAAAGAGCCGATCTCTTCCAACGCTAACGGTGGGCATGGCGGCGGCAAAA
 
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JMSF040B12+           AGATGGACGGATGTGGAGCTGCTGTGGAACGGAAGTGAAAAACCCTGAAAAGATGGTG  
JMSF034O01+           AGATGGACGGGTGTGGAGCTGCTGTGGAACGGAAGTGAAAAACCCTGAAAAGATGGTGTC
                      ____________________________________________________________
consensus             AGATGGACGGGTGTGGAGCTGCTGTGGAACGGAAGTGAAAAACCCTGAAAAGATGGTGTC