Contig 006597:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029L18Sequence507006597 (2)ref|XP_009798427.1|1e-40PREDICTED: mitochondrial carrier protein MTM1-like isoform X1 [Nicotiana sylves669012334 (2)ref|XP_009798428.1|2e-69PREDICTED: mitochondrial carrier protein MTM1-like isoform X2 [Nicotiana sylves
JMSF033L03Sequence705006597 (2)ref|XP_009798427.1|5e-71PREDICTED: mitochondrial carrier protein MTM1-like isoform X1 [Nicotiana sylves739012334 (2)ref|XP_009798428.1|8e-110PREDICTED: mitochondrial carrier protein MTM1-like isoform X2 [Nicotiana sylves

Alignment

This contig is upended


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JMSF033L03+                          GGTACATATGGTGTTACTATAGGTGCACCATGCAAAGTATACTCT
                      ____________________________________________________________
consensus                            GGTACATATGGTGTTACTATAGGTGCACCATGCAAAGTATACTCT
 
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JMSF033L03+           TCCATAGAATTTCGGAAAATGTCATATAAAGGCAAGTAGATCCCCACAGAAGGAATTGCC
                      ____________________________________________________________
consensus             TCCATAGAATTTCGGAAAATGTCATATAAAGGCAAGTAGATCCCCACAGAAGGAATTGCC
 
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JMFF029L18+                                                       TTCCTGACGTATTACT
JMSF033L03+           AATGCTAAACTTGCCATTGTACCTCTCCACAATCTAGCCAATCCTTCCTGACGTATTACT
                      ____________________________________________________________
consensus             AATGCTAAACTTGCCATTGTACCTCTCCACAATCTAGCCAATCCTTCCTGACGTATTACT
 
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JMFF029L18+           TTAGAGAGGACATCCAGTGTTCCTTTGTACCGCGTAGAATCTGGGGGGCACGAAATCTCA
JMSF033L03+           TTAGAGAGGACATCCAGTGTTCCTTTGTACCGCGTAGAATCTGGGGGGCACGAAATCTCA
                      ____________________________________________________________
consensus             TTAGAGAGGACATCCAGTGTTCCTTTGTACCGCGTAGAATCTGGGGGGCACGAAATCTCA
 
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JMFF029L18+           GTTCTAAAAACTGCATTATTTGTGGAGGAGTTACACTTCAGATCCAACATACTATGCCCT
JMSF033L03+           GTTCTAAAAACTGCATTATTTGTGGAGGAGTTACACTTCAGATCCAACATACTATGCCCT
                      ____________________________________________________________
consensus             GTTCTAAAAACTGCATTATTTGTGGAGGAGTTACACTTCAGATCCAACATACTATGCCCT
 
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JMFF029L18+           CCAAAAGACCCCATCCTACAAATGCCATCATAGGGGACACCAGCAGCCTGAGCTTGCAAT
JMSF033L03+           CCAAAAGACCCCATCCTACAAATGCCATCATAGGGGACACCAGCAGCCTGAGCTTGCAAT
                      ____________________________________________________________
consensus             CCAAAAGACCCCATCCTACAAATGCCATCATAGGGGACACCAGCAGCCTGAGCTTGCAAT
 
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JMFF029L18+           CTTGTCTTGGCGACATCGAGAGGGTTGACGAGGATTGCGGAGACAACGGCGGCACCGGCG
JMSF033L03+           CTTGTCTTGGCGACATCGAGAGGGTTGACGAGGATTGCGGAGACAACGGCGGCACCGGCG
                      ____________________________________________________________
consensus             CTTGTCTTGGCGACATCGAGAGGGTTGACGAGGATTGCGGAGACAACGGCGGCACCGGCG
 
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JMFF029L18+           GCAGAAAATGTCCTCTCCACAAAACCCAAATCCACATCCGAATTGGCATGGTGAGACTGC
JMSF033L03+           GCAGAAAATGTCCTCTCCACAAAACCCAAATCCACATCCGAATTGGCATGGTGAGACTGC
                      ____________________________________________________________
consensus             GCAGAAAATGTCCTCTCCACAAAACCCAAATCCACATCCGAATTGGCATGGTGAGACTGC
 
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JMFF029L18+           TGAGCTTCACCATTAGCCATCGCCGTAGACGCGGCGGGGGAGCTCCTATCCAAGTCCACG
JMSF033L03+           TGAGCTTCACCATTAGCCATCGCCGTAGACGCGGCGGGGGAGCTCCTATCCAAGTCCACG
                      ____________________________________________________________
consensus             TGAGCTTCACCATTAGCCATCGCCGTAGACGCGGCGGGGGAGCTCCTATCCAAGTCCACG
 
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JMFF029L18+           GCGGTTGCAGTTCTGGTAGCTGCGGTTGCTCCAATCCATGAAGGCAACCCCTGCTTCGTC
JMSF033L03+           GCGGTTGCAGTTCTGGTAGCTGCGGTTGCTCCAATCCATGAAGGCAACCCCTGCTTCGTC
                      ____________________________________________________________
consensus             GCGGTTGCAGTTCTGGTAGCTGCGGTTGCTCCAATCCATGAAGGCAACCCCTGCTTCGTC
 
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JMFF029L18+           GACGATGATCCAACCACCATAAAAGAATCCAATTTTACCGGAATAAAATCTCTTAGGGTT
JMSF033L03+           GACGATGATCCAACCACCATAAAAGAATCCAATTTTACCGGAATAAAATCTCTTAGGGTT
                      ____________________________________________________________
consensus             GACGATGATCCAACCACCATAAAAGAATCCAATTTTACCGGAATAAAATCTCTTAGGGTT
 
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JMFF029L18+           TTC                                                         
JMSF033L03+           TTCTTCCAGACGAACAATATTGCATGGAGAAATAGAGGATGGGGAGGGATGCGATTCGCC
                      ____________________________________________________________
consensus             TTCTTCCAGACGAACAATATTGCATGGAGAAATAGAGGATGGGGAGGGATGCGATTCGCC