Contig 006593:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002I03Sequence238006593 (2)631022428ref|XP_011076111.1|94.7PREDICTED: uncharacterized protein LOC105160439 [Sesamum indicum]
JMSF033D13Sequence480006593 (2)emb|CDP05147.1|5e-21unnamed protein product [Coffea canephora]141015088

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF033D13+ TTTTTTTTTNAAAAAAAAAAAAAAAGNAAAAAAAAACTAGCCCGTATGCCTACACCCACT
                      ____________________________________________________________
consensus TTTTTTTTTNAAAAAAAAAAAAAAAGNAAAAAAAAACTAGCCCGTATGCCTACACCCACT
 
. : . : . : . : . : . :
JMSF033D13+ CAGGTCTGAAGGAATACCTCATCTTGCGAACGATACAATCCCAAACAGAAACAACAGGAG
                      ____________________________________________________________
consensus CAGGTCTGAAGGAATACCTCATCTTGCGAACGATACAATCCCAAACAGAAACAACAGGAG
 
. : . : . : . : . : . :
JMSF033D13+ ACTGAAGTAGAGAGATGTGATATGAGCTCACATTCTTGTCCCTGGCCATTCTTCCCAATT
                      ____________________________________________________________
consensus ACTGAAGTAGAGAGATGTGATATGAGCTCACATTCTTGTCCCTGGCCATTCTTCCCAATT
 
. : . : . : . : . : . :
JMSF033D13+ TCCCACAACCTTTGCATTTACCCATTTCACGACAACTACCCAAATTTACCTGATTCAAAA
                      ____________________________________________________________
consensus TCCCACAACCTTTGCATTTACCCATTTCACGACAACTACCCAAATTTACCTGATTCAAAA
 
. : . : . : . : . : . :
JMSF002I03+ CCTGT
JMSF033D13+ CCCAATAATACCAAAAAGAATCCGTCTAGTTCAAACAACTCACATGGCCTTCCCTCCTGT
                      ____________________________________________________________
consensus CCCAATAATACCAAAAAGAATCCGTCTAGTTCAAACAACTCACATGGCCTTCCCTCCTGT
 
. : . : . : . : . : . :
JMSF002I03+ TCAACGAAGATGAGAAAGAGAGAGAGAAAAAAAGGGCTTCCCCAGAAGCAATCTTTTTGT
JMSF033D13+ TCAACGAAGATGAGAAAGAGAGAGAGAAAAAAAGGGCTTCCCCAGAAGCAATCTTTTTGT
                      ____________________________________________________________
consensus TCAACGAAGATGAGAAAGAGAGAGAGAAAAAAAGGGCTTCCCCAGAAGCAATCTTTTTGT
 
. : . : . : . : . : . :
JMSF002I03+ GCGCCGGTTTAGAGAGAAGGAGATTTATATAGTTGGGTGCGTTCGGATCCAAATATGAAA
JMSF033D13+ GCGCCGGTTTAGAGAGAAGGAGATTTATATAGTTGGGTGCGTTCGGATCCAAATATGAAA
                      ____________________________________________________________
consensus GCGCCGGTTTAGAGAGAAGGAGATTTATATAGTTGGGTGCGTTCGGATCCAAATATGAAA
 
. : . : . : . : . : . :
JMSF002I03+ AATAAGGACGGGATGAGAGACACAAAGAAAGTTAAACAATTAACTGATCACATGAAA
JMSF033D13+ AATAAGGACGGGATGAGAGACACAAAGAAAGTTAAACAATTAACTGATCACATGAAATTC
                      ____________________________________________________________
consensus AATAAGGACGGGATGAGAGACACAAAGAAAGTTAAACAATTAACTGATCACATGAAATTC