Contig 006588:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001D06Sequence501006588 (3)emb|CBI17617.3|4e-75unnamed protein product [Vitis vinifera]663020134ref|XP_009800041.1|91.3PREDICTED: uncharacterized protein LOC104246018 [Nicotiana sylvestris]
JMSF032C22Sequence689006588 (3)gb|KJB26851.1|8e-125hypothetical protein B456_004G262900 [Gossypium raimondii]545006588 (3)gb|KJB26851.1|9e-80hypothetical protein B456_004G262900 [Gossypium raimondii]

Alignment

This contig is upended


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rJMSF032C22-                                                                GTACAG
                      ____________________________________________________________
consensus                                                                   GTACAG
 
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rJMSF032C22-          TAATGATCNCAATCTTGATCTCTNCTNCATAACGCTTCCTCTGCAATCTGAGTCGTTAAT
                      ____________________________________________________________
consensus             TAATGATCNCAATCTTGATCTCTNCTNCATAACGCTTCCTCTGCAATCTGAGTCGTTAAT
 
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rJMSF032C22-          GCAGTTTTCATTTCTTTGAGTTTCNCCNCAAAAATCTTCTTCTTGTAGNATTCTACCAAA
                      ____________________________________________________________
consensus             GCAGTTTTCATTTCTTTGAGTTTCNCCNCAAAAATCTTCTTCTTGTAGNATTCTACCAAA
 
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rJMSF032C22-          GGTAANAGGTCCTCCTTGGNGAAANGTTCNTAGAANGCTTCAGGTGNCCTCTTTGAAGAC
                      ____________________________________________________________
consensus             GGTAANAGGTCCTCCTTGGNGAAANGTTCNTAGAANGCTTCAGGTGNCCTCTTTGAAGAC
 
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rJMSF032C22-          GGGAAGAATTCAAGAAAATTGTCATCAACTTTACCCCGCTTAANAATTGATATCAGATCA
                      ____________________________________________________________
consensus             GGGAAGAATTCAAGAAAATTGTCATCAACTTTACCCCGCTTAANAATTGATATCAGATCA
 
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rJMSF032C22-          TCAAGACTGTTGTCNACCAAATATNCCTTGAAAAAGTCAGTGATGAANGANAGAACTAGC
JMSF032C22+                                          AAAAGTCAGTGATGAATGAGAGAACTAGC
                      ____________________________________________________________
consensus             TCAAGACTGTTGTCNACCAAATATNCCTTGAAAAAGTCAGTGATGAATGAGAGAACTAGC
 
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rJMSF032C22-          CCTTTGGCAACAAGGTTATCTTTGAGCAGTGGTTGGAACACAGTTTCTGGTGGGAGCCCT
JMSF032C22+           CCTTTGGCAACAAGGTTATCTTTGAGCAGTGGTTGGAACACAGTTTCTGGTGGGAGCCCT
                      ____________________________________________________________
consensus             CCTTTGGCAACAAGGTTATCTTTGAGCAGTGGTTGGAACACAGTTTCTGGTGGGAGCCCT
 
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rJMSF032C22-          GACAACTTCNGAGAAAATGCAAGGGCTGTAAAAATTGCNAGCTTCTTTCTTTCATTATCC
JMSF032C22+           GACAACTTCTGAGAAAATGCAAGGGCTGTAAAAATTGCGAGCTTCTTTCTTTCATTATCC
                      ____________________________________________________________
consensus             GACAACTTCTGAGAAAATGCAAGGGCTGTAAAAATTGCGAGCTTCTTTCTTTCATTATCC
 
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rJMSF032C22-          TCAAAGAGTTCCAATGNCTGTAAGAATCTTCGCNTAACATTTTCAAGATTCTTTATAAGA
JMFF001D06+                                         CGCATAACATTTTCAAGGTTCTTTATAAGA
JMSF032C22+           TCAAAGAGTTCCAATGACTGTAAGAATCTTCGCATAACATTTTCAAGATTCTTTATAAGA
                      ____________________________________________________________
consensus             TCAAAGAGTTCCAATGACTGTAAGAATCTTCGCATAACATTTTCAAGATTCTTTATAAGA
 
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rJMSF032C22-          ANTGGCTTTCTTCGTAGGATCNTCTGTATATAGATTACNGATGGAAGAATGGCTTC    
JMFF001D06+           AATGGCTTTCGCCTTAAGATCTTTTGCACGTAGATTACAGATGGCAAAATGAATTCGCGC
JMSF032C22+           AATGGCTTTCTTCGTAGGATCTTCTGTATATAGATTACAGATGGAAGAATGGCTTCACGC
                      ____________________________________________________________
consensus             AATGGCTTTCTTCGTAGGATCTTCTGTATATAGATTACAGATGGAAGAATGGCTTCGCGC
 
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JMFF001D06+           TCTGGCTGACACTCAATTACAGAGTAAGGGTGGCGCTCCCCCTCATCCGGTTTAACTGTT
JMSF032C22+           TTAGGTTCACACTCAATTACAGAATAAGGGTGGCGCTCCCCCTCATCAGGTTTGATTGTT
                      ____________________________________________________________
consensus             TTTGGTTGACACTCAATTACAGAGTAAGGGTGGCGCTCCCCCTCATCCGGTTTGATTGTT
 
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JMFF001D06+           CCAGGTTGAGTACGACCTCCTGTGAATACAACCTCAAAAAAAGTGTCACCGTATCTAGAG
JMSF032C22+           CCAGGTTGTGTGCGGCCTCCTGTGAAAACAACCTCAAAAAAGGTATCACCGTATCTTGAG
                      ____________________________________________________________
consensus             CCAGGTTGTGTGCGGCCTCCTGTGAATACAACCTCAAAAAAGGTGTCACCGTATCTTGAG
 
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JMFF001D06+           AAGTTAAGTTCTGATGACTCAATGCTCTTAGCAACGAGTTCCAGATCACCAGCATTATCC
JMSF032C22+           AAGTTAAGCTCTGAAGACTCGACGCTCTTAGCAACAAGTTCCAGATCACCAGCATTATCC
                      ____________________________________________________________
consensus             AAGTTAAGTTCTGATGACTCGATGCTCTTAGCAACGAGTTCCAGATCACCAGCATTATCC
 
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JMFF001D06+           AAATAGATCTGGACCACTGCATCCGCAAATGCTGCAGGGTCCAGCGGCGCTGCAATATTC
JMSF032C22+           AGATATATCTGGATCACTACATCTGCAAATGCTGCAGGGTCCAGAGGCGCAGCAATATTC
                      ____________________________________________________________
consensus             AGATATATCTGGATCACTGCATCTGCAAATGCTGCAGGGTCCAGCGGCGCTGCAATATTC
 
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JMFF001D06+           CGTTTGCGGGTCTTAATCCGCGTGCCACCTAGAGTGGGTTTCTCCTTCGAGCTCATAAAC
JMSF032C22+           CGTTTGCGGGTCTTAATCCGCGTGCCACCTAGAGTGGGTTTCTCCTTTGAGCTCATAAAC
                      ____________________________________________________________
consensus             CGTTTGCGGGTCTTAATCCGCGTGCCACCTAGAGTGGGTTTCTCCTTTGAGCTCATAAAC
 
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JMFF001D06+           CAAGATCGAAAAGAATCGAAGTACAGGCAGAGACCCTCTGC                   
JMSF032C22+           CAAGATCGAGATGAATCGGTGTAGAGGCGGACACCCTCTGCTACGCTACTCGCGACGCAA
                      ____________________________________________________________
consensus             CAAGATCGAGATGAATCGGTGTAGAGGCGGAGACCCTCTGCTACGCTACTCGCGACGCAA
 
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JMSF032C22+           AGTACGAAGAGGAGAGAAATGGGAAAGAAAAGGAAAAGAGAGAGAGAGATTGATTCCCCC
                      ____________________________________________________________
consensus             AGTACGAAGAGGAGAGAAATGGGAAAGAAAAGGAAAAGAGAGAGAGAGATTGATTCCCCC