clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF011M07 | Sequence | 510 | 006585 (10) | emb|CDP15943.1| | 3e-71 | unnamed protein product [Coffea canephora] | 639 | 009647 (8) | gb|KDO63393.1| | 2e-60 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMFF014H17 | Sequence | 583 | 006585 (10) | emb|CDP15943.1| | 2e-80 | unnamed protein product [Coffea canephora] | 709 | 009647 (8) | gb|KDO63393.1| | 4e-69 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMSF001D23 | Sequence | 383 | 006585 (10) | emb|CDP15943.1| | 3e-45 | unnamed protein product [Coffea canephora] | 750 | 007154 (2) | ref|XP_009629724.1| | 5e-110 | PREDICTED: phospholipase A1-IIdelta-like [Nicotiana tomentosiformis] |
JMSF020B17 | Sequence | 596 | 006585 (10) | emb|CDP15943.1| | 9e-80 | unnamed protein product [Coffea canephora] | 762 | 009647 (8) | gb|KDO63393.1| | 2e-84 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMSF021D11 | Sequence | 596 | 006585 (10) | emb|CDP15943.1| | 9e-80 | unnamed protein product [Coffea canephora] | 777 | 009647 (8) | gb|KDO63393.1| | 6e-91 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMSF030A20 | Sequence | 663 | 006585 (10) | emb|CDP15943.1| | 1e-83 | unnamed protein product [Coffea canephora] | 696 | 009647 (8) | gb|KDO63393.1| | 3e-73 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMSF031B22 | Sequence | 641 | 006585 (10) | ref|XP_011082995.1| | 8e-93 | PREDICTED: phospholipase A1-IIdelta [Sesamum indicum] | 681 | 007154 (2) | ref|XP_009629724.1| | 2e-90 | PREDICTED: phospholipase A1-IIdelta-like [Nicotiana tomentosiformis] |
JMSF031M12 | Sequence | 646 | 006585 (10) | emb|CDP15943.1| | 1e-79 | unnamed protein product [Coffea canephora] | 762 | 009647 (8) | gb|KDO63393.1| | 6e-87 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMSF044C04 | Sequence | 596 | 006585 (10) | emb|CDP15943.1| | 2e-81 | unnamed protein product [Coffea canephora] | 709 | 009647 (8) | gb|KDO63393.1| | 1e-75 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
JMSF048J19 | Sequence | 660 | 006585 (10) | emb|CDP15943.1| | 5e-83 | unnamed protein product [Coffea canephora] | 776 | 009647 (8) | gb|KDO63393.1| | 6e-91 | hypothetical protein CISIN_1g014927mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
JMSF031B22+ GGAGTTGTTCCCTTGCACTTAGGGTAGTGAAGCGCGA
____________________________________________________________
consensus GGAGTTGTTCCCTTGCACTTAGGGTAGTGAAGCGCGA
. : . : . : . : . : . :
JMSF031B22+ GTTTGGATCCTTTGAAGTATAGAGTGTGAGCCAACCAAACATGACTTTGGGGACTTTATC
____________________________________________________________
consensus GTTTGGATCCTTTGAAGTATAGAGTGTGAGCCAACCAAACATGACTTTGGGGACTTTATC
. : . : . : . : . : . :
JMSF031B22+ ATCTTCCTCATCCCCCTTGTCGCCGTTAGTAATGGAACGAAGCAGAGACTCGGCGGATAC
JMSF044C04+ TCGTCGTTGTCACCACTAGTACTGGGACGAAGCAGAGGCTCGGCGGATAC
JMSF021D11+ TCGTCGTTGTCACCACTAGTACTGGAACGAAGCAGAGGCTCGGCGGATAC
JMSF020B17+ TCGTCGTTGTCACCACTAGTACTGGAACGAAGCAGAGGCTCGGCGGATAC
JMFF014H17+ CACTAGTACTGGAACGAAGCAGAGGCTCGGCGGATAC
JMSF030A20+ TAGTACTGGAACGAAGCAGAGGCTCGGCGGATAC
JMSF048J19+ TAGTACTGGAACGAAGCAGAGGCTCGGCGGATAC
JMSF031M12+ CGTTGTCACCACTAGTACTGGAACGAAGCAGAGGCTCGGCGGATAC
____________________________________________________________
consensus ATCTTCCTCATCGTCGTTGTCACCACTAGTACTGGAACGAAGCAGAGGCTCGGCGGATAC
. : . : . : . : . : . :
JMSF031B22+ CGGCTTGGCGATGAACACGTTGATCCACTCGAGGTCCGTGGTGGTGCCGCGAAACACCAC
JMSF044C04+ TGGCTTGGCGCTGAACACGTTGATCCACTCCAGGTCCGTGGTGGTGCCGCGAAACACCAC
JMSF021D11+ TGGCTTGGCGCTGAACACGTTGATCCACTCCAGGTCCGTGGTGGTGCCGCGAAACACCAC
JMSF020B17+ TGGCTTGGCGCTGAACACGTTGATCCACTCCAGGTCCGTGGTGGTGCCGCGAAACACCAC
JMFF014H17+ TGGCTTGGCGCTGAACACGTTGATCCACTCCAGGTCCGTGGTGGTGCCGCGAAACACCAC
JMSF030A20+ TGGCTTGGCGCTGAACACGTTGATCCACTCCAGGTCCGTGGTGGTGCCGCGAAACACCAC
JMFF011M07+ CCGTGGTGGTGCCGCGAAACACCAC
JMSF048J19+ TGGCTTGGCGCTGAACACGTTGATCCACTCCAGGTCCGTGGTGGTGCCGCGAAACACCAC
JMSF031M12+ TGGCTTGGCGCTGAACACGTTGATCCACTCCAGGTCCGTGGTGGTGCCGCGAAACACCAC
____________________________________________________________
consensus TGGCTTGGCGCTGAACACGTTGATCCACTCCAGGTCCGTGGTGGTGCCGCGAAACACCAC
. : . : . : . : . : . :
JMSF031B22+ GTAGATTTCGCGGCGGCCGAGGGCTTTACTGACGGCGTCGCTGGTAACGGCGACGTAGCC
JMSF044C04+ GTAGATTTCACGGCGGCCGAGGGCTTTACTGACGGCGTCGCTGGTAACGGCGACGTATCC
JMSF021D11+ GTAGATTTCACGGCGGCCGAGGGCTTTACTGACGGCGTCGCTGGTAACGGCGACGTATCC
JMSF020B17+ GTAGATTTCACGGCGGCCGAGGGCTTTACTGACGGCGTCGCTGGTAACGGCGACGTATCC
JMFF014H17+ GTAGATTTCACGGCGGCCGAGGGCTTTACTGACGGCGTCGCTGGTAACGGCGACGTATCC
JMSF030A20+ GTAGATTTCACGGCGGCCGAGGGCTTTACTGACGGCGTCGCTGGTAACGGCGACGTATCC
JMFF011M07+ GTAGATTTCACGGCGGCCGAGGGCTTTACTGACGGCGTCGCTGGTAACGGCGACGTATCC
JMSF048J19+ GTAGATTTCACGGCGGCCGAGGGCTTTACTGACGGCGTCGCTGGTAACGGCGACGTATCC
JMSF031M12+ GTAGATTTCACGGCGGCCGAGGGCTTTACTGACGGCGTCGCTGGTAACGGCGACGTATCC
____________________________________________________________
consensus GTAGATTTCACGGCGGCCGAGGGCTTTACTGACGGCGTCGCTGGTAACGGCGACGTATCC
. : . : . : . : . : . :
JMSF031B22+ AATCCAGTTAGATTCCCTGTCCCAAGATTCGCGGGAGAGGGAGTGAAGGAGGAAGGCCTC
JMSF044C04+ AATCCAATTGGATTCCCGGTCCCAAGATTCGCGGGAGCGGGAGTGAAGAAGGAAGGCCTC
JMSF021D11+ AATCCAATTGGATTCCCGGTCCCAAGATTCGCGGGAGCGGGAGTGAAGAAGGAAGGCCTC
JMSF020B17+ AATCCAATTGGATTCCCGGTCCCAAGATTCGCGGGAGCGGGAGTGAAGAAGGAAGGCCTC
JMFF014H17+ AATCCAATTGGATTCCCGGTCCCAAGATTCGCGGGAGCGGGAGTGAAGAAGGAAGGCCTC
JMSF030A20+ AATCCAATTGGATTCCCGGTCCCAAGATTCGCGGGAGCGGGAGTGAAGAAGGAAGGCCTC
JMFF011M07+ AATCCAATTGGATTCCCGGTCCCAAGATTCGCGGGAGCGGGAGTGAAGAAGGAAGGCCTC
JMSF001D23+ GGGAGTGAAGGAGGAAGGCCTC
JMSF048J19+ AATCCAATTGGATTCCCGGTCCCAAGATTCGCGGGAGCGGGAGTGAAGAAGGAAGGCCTC
JMSF031M12+ AATCCAATTGGATTCCCGGTCCCAAGATTCGCGGGAGCGGGAGTGAAGAAGGAAGGCCTC
____________________________________________________________
consensus AATCCAATTGGATTCCCGGTCCCAAGATTCGCGGGAGCGGGAGTGAAGAAGGAAGGCCTC
. : . : . : . : . : . :
JMSF031B22+ CGGGACGGGGAGTTTGGCGGTGGCGTAGAGGTAGGCCTCCACTTGGTAGTCGTCGGCGGA
JMSF044C04+ CGGGACGGTGAGTTGGGCGGTGGCGTAGAGGTAGGCCTCCACTTGGTAGTCGTCGGCGGA
JMSF021D11+ CGGGACGGTGAGTTGGGCGGTGGCGTAGAGGTAGGCCTCCACTTGGTAGTCGTCGGCGGA
JMSF020B17+ CGGGACGGTGAGTTGGGCGGTGGCGTAGAGGTAGGCCTCCACTTGGTAGTCGTCGGCGGA
JMFF014H17+ CGGGACGGTGAGTTGGGCGGTGGCGTAGAGGTAGGCCTCCACTTGGTAGTCGTCGGCGGA
JMSF030A20+ CGGGACGGTGAGTTGGGCGGTGGCGTAGAGGTAGGCCTCCACTTGGTAGTCGTCGGCGGA
JMFF011M07+ CGGGACGGTGAGTTGGGCGGTGGCGTAGAGGTAGGCCTCCACTTGGTAGTCGTCGGCGGA
JMSF001D23+ CGGGACGGGGAGTTTGGCGGTGGCGTAGAGGTAGGCCTCCACTTGGTAGTCGTCGGCGGA
JMSF048J19+ CGGGACGGTGAGTTGGGCGGTGGCGTAGAGGTAGGCCTCCACTTGGTAGTCGTCGGCGGA
JMSF031M12+ CGGGACGGTGAGTTGGGAGGTGGCGTAGAGGTAGGCCTCCACTTGGTAGTCGTCGGCGGA
____________________________________________________________
consensus CGGGACGGTGAGTTGGGCGGTGGCGTAGAGGTAGGCCTCCACTTGGTAGTCGTCGGCGGA
. : . : . : . : . : . :
JMSF031B22+ TGGGAGCATTACTTTGTGGAAGAAGGAGCGTTTGCCGTAGCGGCAGCTGCCGGCGTACTT
JMSF044C04+ TGGGAGCATGACTTTGTGGAAGAAGGAGTTTTTGCCGTAGCGGCAGCTGCCGGCGTACTT
JMSF021D11+ TGGGAGCATGACTTTGTGGAAGAAGGAGTTTTTGCCGTAGCGGCAGCTGCCGGCGTACTT
JMSF020B17+ TGGGAGCATGACTTTGTGGAAGAAGGAGTTTTTGCCGTAGCGGCAGCTGCCGGCGTACTT
JMFF014H17+ TGGGAGCATGACTTTGTGGAAGAAGGAGTTTTTGCCGTAGCGGCAGCTGCCGGCGTACTT
JMSF030A20+ TGGGAGCATGACTTTGTGGAAGAAGGAGTTTTTGCCGTAGCGGCAGCTGCCGGCGTACTT
JMFF011M07+ TGGGAGCATGACTTTGTGGAAGAAGGAGTTTTTGCCGTAGCGGCAGCTGCCGGCGTACTT
JMSF001D23+ TGGGAGCATTACTTTGTGGAAGAAGGAGCGTTTGCCGTAGCGGCAGCTGCCGGCGTACTT
JMSF048J19+ TGGGAGCATGACTTTGTGGAAGAAGGAGTTTTTGCCGTAGCGGCAGCTGCCGGCGTACTT
JMSF031M12+ TGGGAGCATGACTTTGTGGAAGAAGGAGTTTTTGCCGTAGCGGCAGCTGCCGGCGTACTT
____________________________________________________________
consensus TGGGAGCATGACTTTGTGGAAGAAGGAGTTTTTGCCGTAGCGGCAGCTGCCGGCGTACTT
. : . : . : . : . : . :
JMSF031B22+ GGAGTTGCTGTCGTTGTTGAAGGAGTCGTAGGTGGCTTGACAGAAGTCGCCACACCGGAG
JMSF044C04+ GGAGTTGCTGTCGTGGTTGAAGGAGTCGTAGGTGGCTTGGCAGAAGTCGCCGCACCGGAG
JMSF021D11+ GGAGTTGCTGTCGTGGTTGAAGGAGTCGTAGGTGGCTTGGCAGAAGTCGCCGCACCGGAG
JMSF020B17+ GGAGTTGCTGTCGTGGTTGAAGGAGTCGTAGGTGGCTTGGCAGAAGTCGCCGCACCGGAG
JMFF014H17+ GGAGTTGCTGTCGTGGTTGAAGGAGTCGTAGGTGGCTTGGCAGAAGTCGCCGCACCGGAG
JMSF030A20+ GGAGTTGCTGTCGTGGTTGAAGGAGTCGTAGGTGGCTTGGCAGAAGTCGCCGCACCGGAG
JMFF011M07+ GGAGTTGCTGTCGTGGTTGAAGGAGTCGTAGGTGGCTTGGCAGAAGTCGCCGCACCGGAG
JMSF001D23+ GGAGTTGCTGTCGTTGTTGAAGGAGTCGTAGGTGGCTTGACAGAAGTCGCCACACCGGAG
JMSF048J19+ GGAGTTGCTGTCGTGGTTGAAGGAGTCGTAGGTGGCTTGGCAGAAGTCGCCGCACCGGAG
JMSF031M12+ GGAGTTGCTGTCGTGGTTGAAGGAGTCGTAGGTGGCTTGGCAGAAGTCGCCGCACCGGAG
____________________________________________________________
consensus GGAGTTGCTGTCGTGGTTGAAGGAGTCGTAGGTGGCTTGGCAGAAGTCGCCGCACCGGAG
. : . : . : . : . : . :
JMSF031B22+ AATGAGGTGCCGGAGGCTGAGGTTTAGAGGGTCCAGTAGACCTTCCCAGTTCTCGCTTCC
JMSF044C04+ AATGAGGTGCCGGAGGCTGAGGTTTAGAGGGTCCAGTAGACCTTCCCAGTTCTCGCTTCC
JMSF021D11+ AATGAGGTGCCGGAGGCTGAGGTTTAGAGGGTCCAGTAGACCTTCCCAGTTCTCGCTTCC
JMSF020B17+ AATGAGGTGCCGGAGGCTGAGGTTTAGAGGGTCCAGTAGACCTTCCCAGTTCTCGCTTCC
JMFF014H17+ AATGAGGTGCCGGAGGCTGAGGTTTAGAGGGTCCAGTAGACCTTCCCAGTTCTCGCTTCC
JMSF030A20+ AATGAGGTGCCGGAGGCTGAGGTTTAGAGGGTCCAGTAGACCTTCCCAGTTCTCGCTTCC
JMFF011M07+ AATGAGGTGCCGGAGGCTGAGGTTTAGAGGGTCCAGTAGACCTTCCCAGTTCTCGCTTCC
JMSF001D23+ AATGAGGTGCCGGAGGCTGAGGTTTAGAGGGTCCAGTAGACCTTCCCAGTTCTCGCTTCC
JMSF048J19+ AATGAGGTGCCGGAGGCTGAGGTTTAGAGGGTCCAGTAGACCTTCCCAGTTCTCGCTTCC
JMSF031M12+ AATGAGGTGCCGGAGGCTGAGGTTTAGAGGGTCCAGTAGACCTTCCCAGTTCTCGCTTCC
____________________________________________________________
consensus AATGAGGTGCCGGAGGCTGAGGTTTAGAGGGTCCAGTAGACCTTCCCAGTTCTCGCTTCC
. : . : . : . : . : . :
JMSF031B22+ GAGCAGCTGATGCCATGTCGGTTCTGTCGCCATGGACTGAAAGTGGATAAAGCTTTTGAG
JMSF044C04+ GAGCAGCTGATGCCATGTCGGTTCTGTCGCCATGGACTGAAAGTGGATAAAGCTTTTGAG
JMSF021D11+ GAGCAGCTGATGCCATGTCGGTTCTGTCGCCATGGACTGAAAGTGGATAAAGCTTTTGAG
JMSF020B17+ GAGCAGCTGATGCCATGTCGGTTCTGTCGCCATGGACTGAAAGTGGATAAAGCTTTTGAG
JMFF014H17+ GAGCAGCTGATGCCATGTCGGTTCTGTCGCCATGGACTGAAAGTGGATAAAGCTTTTGAG
JMSF030A20+ GAGCAGCTGATGCCATGTCGGTTCTGTCGCCATGGACTGAAAGTGGATAAAGCTTTTGAG
JMFF011M07+ GAGCAGCTGATGCCATGTCGGTTCTGTCGCCATGGACTGAAAGTGGATAAAGCTTTTGAG
JMSF001D23+ GAGCAGCTGATGCCATGTCGGTTCTGTCGCCATGGACTGAAAGTGGATAAAGCTTTTGAG
JMSF048J19+ GAGCAGCTGATGCCATGTCGGTTCTGTCGCCATGGACTGAAAGTGGATAAAGCTTTTGAG
JMSF031M12+ GAGCAGCTGATGCCATGTCGGTTCTGTCGCCATGGACTGAAAGTGGATAAAGCTTTTGAG
____________________________________________________________
consensus GAGCAGCTGATGCCATGTCGGTTCTGTCGCCATGGACTGAAAGTGGATAAAGCTTTTGAG
. : . : . : . : . : . :
JMSF031B22+ GAC
JMSF044C04+ GACAAAGATGGCTGCAGAGAAGATCAAGATATTGGCATGAAGCCTAAGGGATATTGTTAT
JMSF021D11+ GACAAAGATGGCTGCAGAGAAGATCAAGATATTGGCATGAAGCCTAAGGGATATTGTTAT
JMSF020B17+ GACAAAGATGGCTGCAGAGAAGATCAAGATATTGGCATGAAGCCTAAGGGATATTGTTAT
JMFF014H17+ GACAAAGATGGCTGCAGAGAAGATCAAGATATTGGCATGAAGCCTAAGGGATATTGTTAT
JMSF030A20+ GACAAAGATGGCTGCAGAGAAGATCAAGATATTGGCATGAAGCCTAAGGGATATTGTTAT
JMFF011M07+ GACAAAGATGGCTGCAGAGAAGATCAAGATATTGGCATGAAGCCTAAGGGATATTGTTAC
JMSF001D23+ GACAAAGATGGCTGCAGAGAAGATCAAGATATTAGCATGAAGCCT
JMSF048J19+ GACAAAGATGGCTGCAGAGAAGATCAAGATATTGGCATGAAGCCTAAGGGATATTGTTAT
JMSF031M12+ GACAAAGATGGCTGCAGAGAAGATCAAGATATTGGCATGAAGCCTAAGGGATATTGTTAT
____________________________________________________________
consensus GACAAAGATGGCTGCAGAGAAGATCAAGATATTGGCATGAAGCCTAAGGGATATTGTTAT
. : . : . : . : . : . :
JMSF044C04+ CCTT
JMSF021D11+ CCTT
JMSF020B17+ CCTT
JMFF014H17+ CCTTAC
JMSF030A20+ CCTTAC
JMFF011M07+ CCTT
JMSF048J19+ CCTTAC
JMSF031M12+ CCTTACAAACAAAATAATGAATGGTGAGGGGCTTTTGTAAGAGTAAACTAAATATGTCGC
____________________________________________________________
consensus CCTTACAAACAAAATAATGAATGGTGAGGGGCTTTTGTAAGAGTAAACTAAATATGTCGC