Contig 006582:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF031I17-               TGATACCAGTCTGANAAGCTATCATACATGGATATATAGATGCATAAAAGATTTT
                      ____________________________________________________________
consensus                  TGATACCAGTCTGANAAGCTATCATACATGGATATATAGATGCATAAAAGATTTT
 
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rJMSF031I17-          TGCAGGCAATTTTACATACAGTATATATGTCAAAGTCATAGTTGTATTTCAAAAATCCTA
                      ____________________________________________________________
consensus             TGCAGGCAATTTTACATACAGTATATATGTCAAAGTCATAGTTGTATTTCAAAAATCCTA
 
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rJMSF031I17-          AGCATGAGCTCGAAAAAAAGAAAAAAAAATCTTCTGTATATGTAGACCTGTTCATGTCTA
                      ____________________________________________________________
consensus             AGCATGAGCTCGAAAAAAAGAAAAAAAAATCTTCTGTATATGTAGACCTGTTCATGTCTA
 
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rJMSF031I17-          GTTCTTGGTTCTAGATCCTAAAGATCTGGTCATGCATGTTCCAGATCGCAGTTTACGGCT
                      ____________________________________________________________
consensus             GTTCTTGGTTCTAGATCCTAAAGATCTGGTCATGCATGTTCCAGATCGCAGTTTACGGCT
 
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rJMSF031I17-          CTGAAATCTACATAGAACATTAACATATAATTCAAATAAAGCGAGTTAATTAGTCTCAAA
JMSF031I17+               AATCTACATAGAACATTAACATATAATTCAAATAAAGCGAGTTAATTAGTCTCAAA
                      ____________________________________________________________
consensus             CTGAAATCTACATAGAACATTAACATATAATTCAAATAAAGCGAGTTAATTAGTCTCAAA
 
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rJMSF031I17-          TTTCATATTAGAAATGTAATCAATTCAAATACACTATATTTATACAATAAATATACCAGA
JMSF031I17+           TTTCATATTAGAAATGTAATCAATTCAAATACACTATATTTATACAATAAATATACCAGA
                      ____________________________________________________________
consensus             TTTCATATTAGAAATGTAATCAATTCAAATACACTATATTTATACAATAAATATACCAGA
 
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rJMSF031I17-          GATGTAAGCAATTGCTAGCACAGTCCATACATCAAAAACCCAGAGATTCTTTGTTGATAT
JMSF031I17+           GATGTAAGCAATTGCTAGCACAGTCCATACATCAAAAACCCAGAGATTCTTTGTTGATAT
                      ____________________________________________________________
consensus             GATGTAAGCAATTGCTAGCACAGTCCATACATCAAAAACCCAGAGATTCTTTGTTGATAT
 
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rJMSF031I17-          TTACCCATATTCTGTAAAACAAAATCCGTCAAAATTTCATCATCTAGCCAATTTTCAGGT
JMSF031I17+           TTACCCATATTCTGTAAAACAAAATCCGTCAAAATTTCATCATCTAGCCAATTTTCAGGT
                      ____________________________________________________________
consensus             TTACCCATATTCTGTAAAACAAAATCCGTCAAAATTTCATCATCTAGCCAATTTTCAGGT
 
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rJMSF031I17-          TCAAAAAACACCAAACTGTTTTTTTTTCTTCAAAAACCTAAACACTCGTAGTAGAACGAC
JMSF031I17+           TCAAAAAACACCAAACTGTTTTTTTTTCTTCAAAAACCTAAACACTCGTAGTAGAACGAC
                      ____________________________________________________________
consensus             TCAAAAAACACCAAACTGTTTTTTTTTCTTCAAAAACCTAAACACTCGTAGTAGAACGAC
 
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rJMSF031I17-          CTGTACAGAATCTCCACTCTTGAGTTGAAGACAAACTCCGATCTCGCTTGATTTACATTT
JMSF031I17+           CTGTACAGAATCTCCACTCTTGAGTTGAAGACAAACTCCGATCTCGCTTGATTTACATTT
                      ____________________________________________________________
consensus             CTGTACAGAATCTCCACTCTTGAGTTGAAGACAAACTCCGATCTCGCTTGATTTACATTT
 
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rJMSF031I17-          CCAGCGAACTCATACCCTGAAAAACAAAAAAAATTAAGACATGTAGTANCCTAGCGATCG
JMSF031I17+           CCAGCGAACTCATACCCTGAAAAACAAAAAAAATTAAGACATGTAGTAACCTAGCGATCG
                      ____________________________________________________________
consensus             CCAGCGAACTCATACCCTGAAAAACAAAAAAAATTAAGACATGTAGTAACCTAGCGATCG
 
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rJMSF031I17-          AACTGGC                                                     
JMSF031I17+           AACTGGCAGATTCAACAGATACATTCAAAAATCAAGGATTTCAGAAAGAATCAACGCATT
                      ____________________________________________________________
consensus             AACTGGCAGATTCAACAGATACATTCAAAAATCAAGGATTTCAGAAAGAATCAACGCATT
 
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JMSF031I17+           TAACACTAAAATATGTGTAGATAAAGCGATCGGACAGACAAATTTTTAGAGAGAAGGAGC
                      ____________________________________________________________
consensus             TAACACTAAAATATGTGTAGATAAAGCGATCGGACAGACAAATTTTTAGAGAGAAGGAGC
 
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JMSF031I17+           ATATGCTTCGTAGATGAGAGTAGAGAGAGAGAGACAGAAATGGTGACTTTGTCTCGCATC
                      ____________________________________________________________
consensus             ATATGCTTCGTAGATGAGAGTAGAGAGAGAGAGACAGAAATGGTGACTTTGTCTCGCATC