Contig 006578:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF030N13+                                                          ACTAGGTATAGTT
                      ____________________________________________________________
consensus                                                            ACTAGGTATAGTT
 
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JMFF043N23+               CTAGAGCCAGGTTTCGCCAGGCGAAGAAATTCCCAAAGAAGAACATCAGTGAAAAG
JMSF030N13+           CCAACTAGAGCCAGGTTTCGCCAGGCGAAGAAATTCCCAAAGAAGAACATCAGTGAAAAG
                      ____________________________________________________________
consensus             CCAACTAGAGCCAGGTTTCGCCAGGCGAAGAAATTCCCAAAGAAGAACATCAGTGAAAAG
 
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JMFF043N23+           CCAATGGATACTGAAAACGTAATAGCAGCTGTAAATCCCCCTCGATTATTCTTCGGTGTA
JMSF030N13+           CCAATGGATACTGAAAACGTAATAGCAGCTGTAAATCCCCCTCGANTATTNTTCGGTGTA
                      ____________________________________________________________
consensus             CCAATGGATACTGAAAACGTAATAGCAGCTGTAAATCCCCCTCGATTATTCTTCGGTGTA
 
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JMFF043N23+           ATTTCTGCAATGTATATAGGTGCCACATAACAATGAAGTCCAGCTCCAATTCCCATCAAT
JMSF030N13+           ATTTCTGCAATGTATATAGGTGCCACATAACAATGAAGTCCAGCTCCAATTCCCATCAAT
                      ____________________________________________________________
consensus             ATTTCTGCAATGTATATAGGTGCCACATAACAATGAAGTCCAGCTCCAATTCCCATCAAT
 
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JMFF043N23+           AGTCTTCCAATATTAAGCCACCAAATATTCTTTGCAAATATAATTAAAACCCATCCAACG
JMSF030N13+           AGTCTTCCAATATTAAGCCACCAAATATTCTTTGCAAATATAATTAAAACCCATCCAACG
                      ____________________________________________________________
consensus             AGTCTTCCAATATTAAGCCACCAAATATTCTTTGCAAATATAATTAAAACCCATCCAACG
 
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JMFF043N23+           ATGAAGAATATTTCCAAGAACCACATTGTAAGTCTTCGACCAATGGTTTCTGCTATTCTG
JMSF030N13+           ATGAAGAATATTTCCAAGAACCNCATNGTAAGTCTTCGACCAATGGTTTCTGCTATTNTG
                      ____________________________________________________________
consensus             ATGAAGAATATTTCCAAGAACCACATTGTAAGTCTTCGACCAATGGTTTCTGCTATTCTG
 
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JMFF043N23+           CCACTTATTAGAGCCCCAATCATTCCTCCAAATGTCAATATTGAACCAAAAGCTGAGTAT
JMSF030N13+           CCACTTATTAGAGCCCCAATCATTCCTCCAAATGTCAATATTGAACCAAAAGCTGAGTAT
                      ____________________________________________________________
consensus             CCACTTATTAGAGCCCCAATCATTCCTCCAAATGTCAATATTGAACCAAAAGCTGAGTAT
 
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JMFF043N23+           TCTGCAATAGACAGGCTTAGGTCATCCATGATGCCAAATTCAGCAGGAGATGAATATCCA
JMSF030N13+           TCTGCAATAGACAGGCTTAGGTCATCCATGATGCCAAATTCAGCAGGAGATGAATATCCA
                      ____________________________________________________________
consensus             TCTGCAATAGACAGGCTTAGGTCATCCATGATGCCAAATTCAGCAGGAGATGAATATCCA
 
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JMFF043N23+           ACAGAGAAACCATAAGCTAAAGAACCACTGGCAGCAACAATGGTACATAGGACAACAACA
JMSF030N13+           ACAGAGAAACCATAAGCTAAAGAACCACTGGCAGCAACAATGGTACATAGGACAACAACA
                      ____________________________________________________________
consensus             ACAGAGAAACCATAAGCTAAAGAACCACTGGCAGCAACAATGGTACATAGGACAACAACA
 
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JMFF043N23+           AATGTTATCTCTGCTGCACTTTCACCATTGTTTCCATCTAGCAAGCCTTCTTCCACGCCC
JMSF030N13+           AATGTTATCTCTGNTGCACTTTCACCATTGTTTCCATCTAGCAAGCCTTCTTCCACGCCC
                      ____________________________________________________________
consensus             AATGTTATCTCTGCTGCACTTTCACCATTGTTTCCATCTAGCAAGCCTTCTTCCACGCCC
 
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JMFF043N23+           TCTCTTTCTTGCATCT                                            
JMSF030N13+           TCTCTNTCTTGCATCTNTGATTGAATAGATAGCTCCAATATTGTTGTGTGAAGATGCAAT
                      ____________________________________________________________
consensus             TCTCTTTCTTGCATCTNTGATTGAATAGATAGCTCCAATATTGTTGTGTGAAGATGCAAT
 
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JMSF030N13+           CTTTTACAGAGGAAAGAGAAACTCNGACGAAGAGATAGATAGAAAGGGAGAGAGTATNCC
                      ____________________________________________________________
consensus             CTTTTACAGAGGAAAGAGAAACTCNGACGAAGAGATAGATAGAAAGGGAGAGAGTATNCC