Contig 006575:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018B14Sequence493006575 (4)ref|XP_009626038.1|1e-33PREDICTED: putative receptor-like protein kinase At4g00960 [Nicotiana tomentosi754012740 (5)ref|XP_010089690.1|6e-86Cysteine-rich receptor-like protein kinase 10 [Morus notabilis] gb|EXB38213.1| C
JMSF018C10Sequence249006575 (4)738012740 (5)ref|XP_010089690.1|1e-87Cysteine-rich receptor-like protein kinase 10 [Morus notabilis] gb|EXB38213.1| C
JMSF030H06Sequence618006575 (4)ref|XP_006365884.1|1e-39PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Solanum tuberosu740012740 (5)ref|XP_010646643.1|2e-77PREDICTED: cysteine-rich receptor-like protein kinase 10, partial [Vitis vinife
JMSF045A13Sequence525006575 (4)emb|CAC84552.1|6e-34putative receptor-like serine-threonine protein kinase [Solanum tuberosum]651012740 (5)emb|CBI23554.3|6e-57unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMSF030H06+ ATCTTCATTAAACTGGTCGAT
                      ____________________________________________________________
consensus ATCTTCATTAAACTGGTCGAT
 
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JMSF045A13+ TAT
JMSF018B14+ AATTCCACCGGTACACATAAGGATCCTTTGAAATGGAACCTAT
JMSF030H06+ ACTCGTGGCGTTCTCCAAATTCCACCGATACCAATAAGGATCCTTTGAAATGGAACCTAT
                      ____________________________________________________________
consensus ACTCGTGGCGTTCTCCAAATTCCACCGGTACCCATAAGGATCCTTTGAAATGGAACCTAT
 
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JMSF045A13+ GATGAATCTATTGGAGTATAGTATGACGCACTCATCGTACCCTCCGAACGCCTCCTTCTG
JMSF018B14+ GATGAATCTATGGGAGTATAGTATGACGCACTCATCGTACCCTCCGAACGCCTCCTTCTG
JMSF030H06+ GATGAATCTATTGGAGTATAGTATGACGCACTCATCGTACCCTCCGAACGCCTCCTTCTG
                      ____________________________________________________________
consensus GATGAATCTATTGGAGTATAGTATGACGCACTCATCGTACCCTCCGAACGCCTCCTTCTG
 
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JMSF045A13+ ATTAGGACATAATTGTGCCAACTTCTTAGCAGCATCGGTAACACAGGTACGACATGCGTC
JMSF018B14+ ATTAGGACATAATTGTGCCAACTTCTTAGCAGCATCAGTAACACAGACACGACATGTGTC
JMSF030H06+ ATTAGGACATAATTGTGCCAACTTCTTAGCGGCATCGGTAACACAGGTACGACATGCGTC
                      ____________________________________________________________
consensus ATTAGGACATAATTGTGCCAACTTCTTAGCAGCATCGGTAACACAGGTACGACATGCGTC
 
. : . : . : . : . : . :
JMSF045A13+ CAGCTTAACGTCACCTCTGCACATCGCAAGCACGCTCGTCATGTCGGGACTTTGGCCTTC
JMSF018B14+ CAGCTTAACGTCACCTCTACACAGCGCAACCACGCTCGTCATGTCGGGACTTTGGCCTTC
JMSF030H06+ CAGCTTAACGTCACCTCTGCACATCGCAAGCACGCTCGTCATGTCGGGACTTTGGCCTTC
                      ____________________________________________________________
consensus CAGCTTAACGTCACCTCTGCACATCGCAAGCACGCTCGTCATGTCGGGACTTTGGCCTTC
 
. : . : . : . : . : . :
JMSF045A13+ GGATGCGTTGTAGAATCCGTATTCATTAACCTCGGACGAGAGGGAGGAAAGAAGTGTGTT
JMSF018B14+ GGATGCGTTGTAGAATCCGTATTCATTAACCTCGGACGAGAGGGAGGAAAGAAGTGTGTT
JMSF018C10+ ATTCATTAACCTCGGACGAGAGGGAGGAAAGAAGTGTGTT
JMSF030H06+ GGATGCGTTGTAGAATCCGTATTCATTAACCTCGGACGAGAGGGAGGAAAGAAGTGTGTT
                      ____________________________________________________________
consensus GGATGCGTTGTAGAATCCGTATTCATTAACCTCGGACGAGAGGGAGGAAAGAAGTGTGTT
 
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JMSF045A13+ AAGGTTGTTCTGGTAGGCGCTGTTTGCTGTGTAGTTTCCAGTTTTGCCGCATACTGAGAA
JMSF018B14+ AAGGTTGGTGTGGTAGGTGCTGTTTGGTGTGTAGTTTCCAGTTTTGCTGCATACTGAGAA
JMSF018C10+ AAGGTTGGTGTGGTAGGTGCTGTTTGGTGTGTAGTTTCCAGTTTTGCTGCATACTGAGAA
JMSF030H06+ AAGGTTGTTCTGGTAGGCGCTGTTTGCTGTGTAGTTTCCAGTTTTGCCGCATACTGAGAA
                      ____________________________________________________________
consensus AAGGTTGTTGTGGTAGGTGCTGTTTGGTGTGTAGTTTCCAGTTTTGCTGCATACTGAGAA
 
. : . : . : . : . : . :
JMSF045A13+ TACAAGAT---CAGGCTGTGCGACTGCCGAAAGGGTGATGATGATACTAGAAAGCAGGTA
JMSF018B14+ TACAAGATCAGCAGGCTGTGCGGCTGCCGAAAGGGTGATGATGATGCTAGAAAGCAGGTA
JMSF018C10+ TACAAGATCAGCAGGCTGTGCGGCTGCCGAAAGGGTGATGATGATGCTAGAAAGCAGGTA
JMSF030H06+ TACAAGAT---CAGGCTGTGCGACTGCCGAAAGGGTGATGATGATACTAGAAAGCAGGTA
                      ____________________________________________________________
consensus TACAAGATCAGCAGGCTGTGCGGCTGCCGAAAGGGTGATGATGATGCTAGAAAGCAGGTA
 
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JMSF045A13+ TAGG-AAAACCAAGCATCTCTGCAAATCCATGCCACCTAGCTTGGCTAGCTTCATGTTCA
JMSF018B14+ TAGG-AAAACCAAGCATCTCTGCAAATCAATGCCACCTAGCTT
JMSF018C10+ TAGG-AAAACCAAGCATCTCTGCAAATCCATGCCACCTAGCTT
JMSF030H06+ TAGGAAAAACCAAGCATCTCTGCAAATCCATGCCACCTAGCTTGGCTAGCTTCATGTTCA
                      ____________________________________________________________
consensus TAGG-AAAACCAAGCATCTCTGCAAATCCATGCCACCTAGCTTGGCTAGCTTCATGTTCA
 
. : . : . : . : . : . :
JMSF045A13+ CACAAAATATGCCAACTCTTATTCCTATGATGAGCTTAAGTTTCAACCACAGAGCGCGAA
JMSF030H06+ CACAAAATATGCCAACTCTTATTCCTATGATGAGCTTAAGTTTCAACCACAGAGCGCGAA
                      ____________________________________________________________
consensus CACAAAATATGCCAACTCTTATTCCTATGATGAGCTTAAGTTTCAACCACAGAGCGCGAA
 
. : . : . : . : . : . :
JMSF045A13+ TTATTTGTAAACATAAAACCTAGTTTTTCCTAAGAAAAATACTAT
JMSF030H06+ TTATTTGTAAACATAAAACCTAGTTTTTCCTAAGAAAAATACTATGTGTACTTCCAATCC
                      ____________________________________________________________
consensus TTATTTGTAAACATAAAACCTAGTTTTTCCTAAGAAAAATACTATGTGTACTTCCAATCC