Contig 006572:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021G19Sequence658006572 (3)emb|CDO99543.1|2e-40unnamed protein product [Coffea canephora]780005672 (7)ref|XP_009769323.1|5e-72PREDICTED: metal-independent phosphoserine phosphatase-like [Nicotiana sylvestr
JMSF030B20Sequence372006572 (3)660008327 (5)ref|XP_004241708.1|1e-85PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Solanum lycopersicum]
JMSF037A03Sequence634006572 (3)ref|XP_004232874.1|4e-35PREDICTED: probable 2-carboxy-D-arabinitol-1-phosphatase [Solanum lycopersicum]705005672 (7)ref|XP_009769323.1|3e-72PREDICTED: metal-independent phosphoserine phosphatase-like [Nicotiana sylvestr

Alignment

This contig is upended


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JMSF021G19+                                AAGAAACACGAGAGGCTGCTCCCTCCCCTGCCATATAAC
                      ____________________________________________________________
consensus                                  AAGAAACACGAGAGGCTGCTCCCTCCCCTGCCATATAAC
 
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JMSF021G19+           CTCGGCTGTGGACTTTGCACGCGAGATTGGACTTGCAAAACATTGGTCGAAGTGTATCTC
                      ____________________________________________________________
consensus             CTCGGCTGTGGACTTTGCACGCGAGATTGGACTTGCAAAACATTGGTCGAAGTGTATCTC
 
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JMSF021G19+           CTCGATCGCCTTTCTACACCGCTCGGCTTGCATAACTCCTTTTTCTGTCAGCACGGAGAG
                      ____________________________________________________________
consensus             CTCGATCGCCTTTCTACACCGCTCGGCTTGCATAACTCCTTTTTCTGTCAGCACGGAGAG
 
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JMSF021G19+           ATTCGAGCTTCCCTACACACGTGATCAGTTCGATTGGTTAGCAATGGAGCCGAAAGAACG
                      ____________________________________________________________
consensus             ATTCGAGCTTCCCTACACACGTGATCAGTTCGATTGGTTAGCAATGGAGCCGAAAGAACG
 
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JMSF021G19+           AGGGGATTGGAGACGAGTGATCAAACCTGCACTCTACTTTCTTCGTTCCAAGTGCTGTAT
JMSF037A03+                                    CCTGCACTCTACTTTCTTCGTTCCAAGTGCTGTAT
                      ____________________________________________________________
consensus             AGGGGATTGGAGACGAGTGATCAAACCTGCACTCTACTTTCTTCGTTCCAAGTGCTGTAT
 
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JMSF021G19+           CCGTGTCGCACAAGCGTGACCTTCTTAGGCGAAGATAACGCCTTCTGAGTCAGCGATTTC
JMSF037A03+           CCGTGTCGCACAAGCGTGACCTTCTTAGGCGAAGATAACGCCTTCTGAGTCAGCGATTTC
JMSF030B20+                                                           GTCAGCGANTTC
                      ____________________________________________________________
consensus             CCGTGTCGCACAAGCGTGACCTTCTTAGGCGAAGATAACGCCTTCTGAGTCAGCGATTTC
 
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JMSF021G19+           GTTGCTCGATAGAAATCATATGCGCTCCCGGTCAAGGGAATATCATTTCCAACTTTTTCT
JMSF037A03+           GTTGCTCGATAGAAATCATATGCGCTCCCGGTCAAGGGAATATCATTTCCAACTTTTTCT
JMSF030B20+           GTTGCTCGATAGAAATCATATGCGCTCCCGGTCAAGGGAATATCATTTCCAACTTTTTCT
                      ____________________________________________________________
consensus             GTTGCTCGATAGAAATCATATGCGCTCCCGGTCAAGGGAATATCATTTCCAACTTTTTCT
 
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JMSF021G19+           GTTGTTGTGGTGGGCAGCTCTGGAGTTGAAGTGGAGCACAGAACCCTACAGGTGGAGCCA
JMSF037A03+           GTTGTTGTGGTGGGCAGCTCTGGAGTTGAAGTGGAGCACAGAACCCTACAGGTGGAGCCA
JMSF030B20+           GTTGTTGTGGTGGGCAGCTCTGGAGTTGAAGTGGAGCACAGAACCCTACAGGTGGANCCA
                      ____________________________________________________________
consensus             GTTGTTGTGGTGGGCAGCTCTGGAGTTGAAGTGGAGCACAGAACCCTACAGGTGGAGCCA
 
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JMSF021G19+           GAGTTACCAGCATGAATCCTAGAGGATTTCTTGGAGTTTGGAGTGGAAGTTCGAGGAAAA
JMSF037A03+           GAGTTACCAGCATGAATCCTAGAGGATTTCTTGGAGTTTGGAGTGGAAGTTCGAGGAAAA
JMSF030B20+           GAGTTACCAGCATGAATCCTAGAGGATTTCTTGGAGTTTGGAGTGGAAGTTCGAGGAAAA
                      ____________________________________________________________
consensus             GAGTTACCAGCATGAATCCTAGAGGATTTCTTGGAGTTTGGAGTGGAAGTTCGAGGAAAA
 
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JMSF021G19+           TAAGGACAGGTAACAAGAGCTCTGCAAGTAGTCATCCTCGGAAACCTCAAAAAAGCTCAA
JMSF037A03+           TAAGGACAGGTAACAAGAGCTCTGCAAGTAGTCATCCTCGGAAACCTCAAAAAAGCTCAA
JMSF030B20+           TAAGGACAGGTAACAAGAGCTCTGCAAGTAGTCATCCTCGGAAACCTCAAAAAAGCTCAA
                      ____________________________________________________________
consensus             TAAGGACAGGTAACAAGAGCTCTGCAAGTAGTCATCCTCGGAAACCTCAAAAAAGCTCAA
 
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JMSF021G19+           TCAAAACTGGTTCTTGAAATGTTTAAGAATGTTTTTTTTCCAGGTTTGGGTTGTCCAAGA
JMSF037A03+           TCAAAACTGGTTCTTGAAATGTTTAAGAATGTTTTTTTTCCAGGTTTGGGTTGTCCAAGA
JMSF030B20+           TCAAAACTGGTTCTTGAAATGTTTAAGAATGTTTTTTTTCCAGGTTTGGGTTGTCCAAGA
                      ____________________________________________________________
consensus             TCAAAACTGGTTCTTGAAATGTTTAAGAATGTTTTTTTTCCAGGTTTGGGTTGTCCAAGA
 
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JMSF021G19+           TGAGCTTCCATTACCACT                                          
JMSF037A03+           TGAGCTTCCATTACCACT                                          
JMSF030B20+           TGAGCTTCCATTACCACTGGTGGAGATTGTGGGATAGGGAGATAATAATATGGTCAATCC
                      ____________________________________________________________
consensus             TGAGCTTCCATTACCACTGGTGGAGATTGTGGGATAGGGAGATAATAATATGGTCAATCC