Contig 006566:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010D06Sequence464006566 (10)gb|EPS73232.1|2e-38hypothetical protein M569_01523 [Genlisea aurea]808009854 (6)ref|XP_009776176.1|3e-102PREDICTED: 2-isopropylmalate synthase B [Nicotiana sylvestris]
JMFF050D11Sequence615006566 (10)gb|EPS73232.1|2e-74hypothetical protein M569_01523 [Genlisea aurea]644009854 (6)ref|XP_009776176.1|3e-56PREDICTED: 2-isopropylmalate synthase B [Nicotiana sylvestris]
JMFS018C11Sequence625006566 (10)gb|EPS73232.1|1e-77hypothetical protein M569_01523 [Genlisea aurea]
JMFS036A12Sequence597006566 (10)gb|EPS73232.1|1e-55hypothetical protein M569_01523 [Genlisea aurea]
JMFS038D06Sequence608006566 (10)gb|EPS73232.1|3e-58hypothetical protein M569_01523 [Genlisea aurea]
JMFS056E08Sequence616006566 (10)gb|EPS73232.1|6e-82hypothetical protein M569_01523 [Genlisea aurea]
JMSF008D18Sequence297006566 (10)772009854 (6)ref|XP_009776176.1|3e-105PREDICTED: 2-isopropylmalate synthase B [Nicotiana sylvestris]
JMSF022O16Sequence630006566 (10)gb|EPS73232.1|6e-78hypothetical protein M569_01523 [Genlisea aurea]750009854 (6)ref|XP_009776176.1|1e-86PREDICTED: 2-isopropylmalate synthase B [Nicotiana sylvestris]
JMSF029E06Sequence662006566 (10)gb|EPS73232.1|2e-68hypothetical protein M569_01523 [Genlisea aurea]735009854 (6)ref|XP_009776176.1|1e-88PREDICTED: 2-isopropylmalate synthase B [Nicotiana sylvestris]
JMSF032C12Sequence662006566 (10)gb|EPS73232.1|4e-80hypothetical protein M569_01523 [Genlisea aurea]729009854 (6)ref|XP_009776176.1|4e-88PREDICTED: 2-isopropylmalate synthase B [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS056E08+                                                                 TGGCCT
                      ____________________________________________________________
consensus                                                                   TGGCCT
 
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JMFS056E08+           TCTCCACCACTTGCTCCCTGCTCATGTTGAGCTTGAACTTCATGTGTATCTCACTGGTGG
JMFF050D11+                                               ACTTCATGTGTATCTCACTGGTGG
JMFS018C11+                                 CATGTTGAGCTTGAACTTCATGTGTATCTCACTGGTGG
JMSF022O16+                                 CATGTTGAGCTTGAACTTCATGTGTATCTCACTGGTGG
JMSF032C12+               CACCACTTGCTCCCTGCTCATGTTGAGCTTGAACTTCATGTGTATCTCACTGGTGG
JMSF029E06+                                                                     GG
                      ____________________________________________________________
consensus             TCTCCACCACTTGCTCCCTGCTCATGTTGAGCTTGAACTTCATGTGTATCTCACTGGTGG
 
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JMFS056E08+           CGATGAATGTATGCACCCGAGGCTTCTTGGCATGCTTCACCGCCTCCCAAGCCCGATCAA
JMFF050D11+           CGATGAATGTATGCACCCGAGGCTTCTTGGCATGCTTCACCGCCTCCCAAGCCCGATCAA
JMFS018C11+           CGATGAATGTATGCACCCGAGGCTTCTTGGCATGCTTCACCGCCTCCCAAGCCCGATCAA
JMSF022O16+           CGATGAATGTATGCACCCGAGGCTTCTTGGCATGCTTCACCGCCTCCCAAGCCCGATCAA
JMSF032C12+           CGATGAATGTATGCACCCGAGGCTTCTTGGCATGCTTCACCGCCTCCCAAGCCCGATCAA
JMFS038D06+                                                    GCCTCCCAAGCCCGATCAA
JMFS036A12+                                                               CCGATCAA
JMSF029E06+           CGATGAATGTATGCACCCGAGGCTTCTTGGCATGCTTCACCGCCTCCCAAGCCCGATCAA
                      ____________________________________________________________
consensus             CGATGAATGTATGCACCCGAGGCTTCTTGGCATGCTTCACCGCCTCCCAAGCCCGATCAA
 
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JMFS056E08+           TATCCCTCTGATTGCACCTGGAAAGGCCGCATATGACCGGAACGTGTTCGCCCTCCCCAT
JMFF050D11+           TATCCCTCTGATTGCACCTGGAAAGGCCGCATATGACCGGAACGTGTTCGCCCTCCCCAT
JMFS018C11+           TATCCCTCTGATTGCACCTGGAAAGGCCGCATATGACCGGAACGTGTTCGCCCTCCCCAT
JMSF022O16+           TATCCCTCTGATTGCACCTGGAAAGGCCGCATATGACCGGAACGTGTTCGCCCTCCCCAT
JMSF032C12+           TATCCCTCTGATTGCACCTGGAAAGGCCGCATATGACCGGAACGTGTTCGCCCTCCCCAT
JMFS038D06+           TATCCCTCTGATTGCACCTGGAAAGGCCGCATATGACCGGAACGTGTTCGCCCTCCCCAT
JMFS036A12+           TATCCCTCTGATTGCACCTGGAAAGGCCGCATATGACCGGAACGTGTTCGCCCTCCCCAT
JMSF029E06+           TATCCCTCTGATTGCACCTGGAAAGGCCGCATATGACCGGAACGTGTTCGCCCTCCCCAT
                      ____________________________________________________________
consensus             TATCCCTCTGATTGCACCTGGAAAGGCCGCATATGACCGGAACGTGTTCGCCCTCCCCAT
 
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JMFS056E08+           TCCCAACCTCCTGCGCAATCAATCTGACGGCCTCGAAATCGGCCTCCGAGGCAGCAGGGA
JMFF050D11+           TCCCAACCTCCTGCGCAATCAATCTGACGGCCTCGAAATCGGCCTCCGAGGCAGCAGGGA
JMFS018C11+           TCCCAACCTCCTGCGCAATCAATCTGACGGCCTCGAAATCGGCCTCCGAGGCAGCAGGGA
JMSF022O16+           TCCCAACCTCCTGCGCAATCAATCTGACGGCCTCGAAATCGGCCTCCGAGGCAGCAGGGA
JMSF032C12+           TCCCAACCTCCTGCGCAATCAATCTGACGGCCTCGAAATCGGCCTCCGAGGCAGCAGGGA
JMFS038D06+           TCCCAACCTCCTGCGCAATCAATCTGACGGCCTCGAAATCGGCCTCCGAGGCAGCAGGGA
JMFF010D06+                  CTCCTGCGCAATCAATCTGACGGCCTCGAAATCGGCCTCCGAGGCAGCAGGGA
JMFS036A12+           TCCCAACCTCCTGCGCAATCAATCTGACGGCCTCGAAATCGGCCTCCGAGGCAGCAGGGA
JMSF029E06+           TCCCAACCTCCTGCGCAATCAATCTGACGGCCTCGAAATCGGCCTCCGAGGCAGCAGGGA
                      ____________________________________________________________
consensus             TCCCAACCTCCTGCGCAATCAATCTGACGGCCTCGAAATCGGCCTCCGAGGCAGCAGGGA
 
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JMFS056E08+           ACCCCGCCTCAATGATATCCACACCGAGCTTGGCCAGCTGCCGCGCGACGTCGAGCTTCT
JMFF050D11+           ACCCCGCCTCAATGATATCCACACCGAGCTTGGCCAGCTGCCGCGCGACGTCGAGCTTCT
JMFS018C11+           ACCCCGCCTCAATGATATCCACACCGAGCTTGGCCAGCTGCCGCGCGACGTCGAGCTTCT
JMSF022O16+           ACCCCGCCTCAATGATATCCACACCGAGCTTGGCCAGCTGCCGCGCGACGTCGAGCTTCT
JMSF032C12+           ACCCCGCCTCAATGATATCCACACCGAGCTTGGCCAGCTGCCGCGCGACGTCGAGCTTCT
JMFS038D06+           ACCCCGCCTCAATGATATCCACACCGAGCTTGGCCAGCTGCCGCGCGACGTCGAGCTTCT
JMFF010D06+           ACCCCGCCTCAATGATATCCACACCGAGCTTGGCCAGCTGCCGCGCGACGTCGAGCTTCT
JMFS036A12+           ACCCCGCCTCAATGATATCCACACCGAGCTTGGCCAGCTGCCGCGCGACGTCGAGCTTCT
JMSF029E06+           ACCCCGCCTCAATGATATCCACACCGAGCTTGGCCAGCTGCCGCGCGACGTCGAGCTTCT
                      ____________________________________________________________
consensus             ACCCCGCCTCAATGATATCCACACCGAGCTTGGCCAGCTGCCGCGCGACGTCGAGCTTCT
 
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JMFS056E08+           CTTTGGTGGTCATTGTGGCGCCGGGGGACTGCTCGCCGTCCCGGAGGGTGGTGTCGAAAA
JMFF050D11+           CTTTGGTGGTCATTGTGGCGCCGGGGGACTGCTCGCCGTCCCGGAGGGTGGTGTCGAAAA
JMFS018C11+           CTTTGGTGGTCATTGTGGCGCCGGGGGACTGCTCGCCGTCCCGGAGGGTGGTGTCGAAAA
JMSF022O16+           CTTTGGTGGTCATTGTGGCGCCGGGGGACTGCTCGCCGTCCCGGAGGGTGGTGTCGAAAA
JMSF032C12+           CTTTGGTGGTCATTGTGGCGCCGGGGGACTGCTCGCCGTCCCGGAGGGTGGTGTCGAAAA
JMFS038D06+           CTTTGGTGGTCATTGTGGCGCCGGGGGACTGCTCGCCGTCCCGGAGGGTGGTGTCGAAAA
JMFF010D06+           CTTTGGTGGTCATTGTGGCGCCGGGGGACTGCTCGCCGTCCCGGAGGGTGGTGTCGAAAA
JMFS036A12+           CTTTGGTGGTCATTGTGGCGCCGGGGGACTGCTCGCCGTCCCGGAGGGTGGTGTCGAAAA
JMSF029E06+           CTTTGGTGGTCATTGTGGCGCCGGGGGACTGCTCGCCGTCCCGGAGGGTGGTGTCGAAAA
                      ____________________________________________________________
consensus             CTTTGGTGGTCATTGTGGCGCCGGGGGACTGCTCGCCGTCCCGGAGGGTGGTGTCGAAAA
 
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JMFS056E08+           CTCGCACATAGTTAGGGTCCGAGATTCTGTTCGGGATGTAATCCGGCCGCCTTGGAGCCC
JMFF050D11+           CTCGCACATAGTTAGGGTCCGAGATTCTGTTCGGGATGTAATCCGGCCGCCTTGGAGCCC
JMFS018C11+           CTCGCACATAGTTAGGGTCCGAGATTCTGTTCGGGATGTAATCCGGCCGCCTTGGAGCCC
JMSF022O16+           CTCGCACATAGTTAGGGTCCGAGATTCTGTTCGGGATGTAATCCGGCCGCCTTGGAGCCC
JMSF032C12+           CTCGCACATAGTTAGGGTCCGAGATTCTGTTCGGGATGTAATCCGGCCGCCTTGGAGCCC
JMFS038D06+           CTCGCACATAGTTAGGGTCCGAGATTCTGTTCGGGATGTAATCCGGCCGCCTTGGAGCCC
JMFF010D06+           CTCGCACATAGTTAGGGTCCGAGATTCTGTTCGGGATGTAATCCGGCCGCCTTGGAGCCC
JMFS036A12+           CTCGCACATAGTTAGGGTCCGAGATTCTGTTCGGGATGTAATCCGGCCGCCTTGGAGCCC
JMSF029E06+           CTCGCACATAGTTAGGGTCCGAGATTCTGTTCGGGATGTAATCCGGCCGCCTTGGAGCCC
                      ____________________________________________________________
consensus             CTCGCACATAGTTAGGGTCCGAGATTCTGTTCGGGATGTAATCCGGCCGCCTTGGAGCCC
 
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JMFS056E08+           CCAATCCGCATCGTACCACGCCGGAGGCGTAGGAGAAGGAATTACTCGTTGCTGTGCTGC
JMFF050D11+           CCAATCCGCATCGTACCACGCCGGAGGCGTAGGAGAAGGAATTACTCGTTGCTGTGCTGC
JMFS018C11+           CCAATCCGCATCGTACCACGCCGGAGGCGTAGGAGAAGGAATTACTCGTTGCTGTGCTGC
JMSF022O16+           CCAATCCGCATCGTACCACGCCGGAGGCGTAGGAGAAGGAATTACTCGTTGCTGTGCTGC
JMSF032C12+           CCAATCCGCATCGTACCACGCCGGAGGCGTAGGAGAAGGAATTACTCGTTGCTGTGCTGC
JMFS038D06+           CCAATCCGCATCGTACCACGCCGGAGGCGTAGGAGAAGGAATTACTCGTTGCTGTGCTGC
JMFF010D06+           CCAATCCGCATCGTACCACGCCGGAGGCGTAGGAGAAGGAATTACTCGTTGCTGTGCTGC
JMFS036A12+           CCAATCCGCATCGTACCACGCCGGAGGCGTAGGAGAAGGAATTACTCGTTGCTGTGCTGC
JMSF008D18+              ATCCGCATCGTACCACGCCGGAGGCGTAGGAGAAGGAATTACTCGTTGCTGTGCTGC
JMSF029E06+           CCAATCCGCATCGTACCACGCCGGAGGCGTAGGAGAAGGAATTACTCGTTGCTGTGCTGC
                      ____________________________________________________________
consensus             CCAATCCGCATCGTACCACGCCGGAGGCGTAGGAGAAGGAATTACTCGTTGCTGTGCTGC
 
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JMFS056E08+           TGCTGCTGCTGCTGAGCGAGCAGTATCCCCGCTTCAGGAAACTACCGCAAGTAGCATTGT
JMFF050D11+           TGCTGCTGCTGCTGAGCGAGCAGTATCCCCGCTTCAGGAAACTACCGCAAGTAGCATTGT
JMFS018C11+           TGCTGCTGCTGCTGAGCGAGCAGTATCCCCGCTTCAGGAAACTACCGCAAGTAGCATTGT
JMSF022O16+           TGCTGCTGCTGCTGAGCGAGCAGTATCCCCGCTTCAGGAAACTACCGCAAGTAGCATTGT
JMSF032C12+           TGCTGCTGCTGCTGAGCGAGCAGTATCCCCGCTTCAGGAAACTACCGCAAGTAGCATTGT
JMFS038D06+           TGCTGCTGCTGCTGAGCGAGCAGTATCCCCGCTTCAGGAAACTACCGCAAGTAGCATTGT
JMFF010D06+           TGCTGCTGCTGCTGAGCGAGCAGTATCCCCGCTTCAGGAAACTACCGCAAGTAGCATTGT
JMFS036A12+           TGCTGCTGCTGCTGAGCGAGCAGTATCCCCGCTTCAGGAAACTACCGCAAGTAGCATTGT
JMSF008D18+           TGCTGCTGCTGCTGAGCGAGCAGTATCCCCGCTTCAGGAAACTACCGCAAGTAGCATTGT
JMSF029E06+           TGCTGCTGCTGCTGAGCGAGCAGTATCCCCGCTTCAGGAAACTACCGCAAGTAGCATTGT
                      ____________________________________________________________
consensus             TGCTGCTGCTGCTGAGCGAGCAGTATCCCCGCTTCAGGAAACTACCGCAAGTAGCATTGT
 
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JMFS056E08+           TAGTGCGAACGAGAGGGCATTTGCATTTGTGGCGCTGAAACACAGCGTGAGGGTTAGGGT
JMFF050D11+           TAGTGCGAACGAGAGGGCATTTGCATTTGTGGCGCTGAAACACAGCGTGAGGGTTAGGGT
JMFS018C11+           TAGTGCGAACGAGAGGGCATTTGCATTTGTGGCGCTGAAACACAGCGTGAGGGTTAGGGT
JMSF022O16+           TAGTGCGAACGAGAGGGCATTTGCATTTGTGGCGCTGAAACACAGCGTGAGGGTTAGGGT
JMSF032C12+           TAGTGCGAACGAGAGGGCATTTGCATTTGTGGCGCTGAAACACAGCGTGAGGGTTAGGGT
JMFS038D06+           TAGTGCGAACGAGAGGGCATTTGCATTTGTGGCGCTGAAACACAGCGTGAGGGTTAGGGT
JMFF010D06+           TAGTGCGAACGAGAGGGCATTTGCATTTGTGGCGCTGAAACACAGCGTGAGGGTTAGGGT
JMFS036A12+           TAGTGCGAACGAGAGGGCATTTGCATTTGTGGCGCTGAAACACAGCGTGAGGGTTAGGGT
JMSF008D18+           TAGTGCGAACGAGAGGGCATTTGCATTTGTGGCGCTGAAACACAGCGTGAGGGTTAGGGT
JMSF029E06+           TAGTGCGAACGAGAGGGCATTTGCATTTGTGGCGCTGAAACACAGCGTGAGGGTTAGGGT
                      ____________________________________________________________
consensus             TAGTGCGAACGAGAGGGCATTTGCATTTGTGGCGCTGAAACACAGCGTGAGGGTTAGGGT
 
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JMFS056E08+           TTGAGCAGAA                                                  
JMFF050D11+           TTGAGCAGAAAGACGCCATTGATGACCTTAGTGCTTGCTTGTCCGAGCTGT         
JMFS018C11+           TTGAGCAGAAAGACGCCATTGATGACCTTAGTGCTTGCTTGTCCGAG             
JMSF022O16+           TTGAGCAGAAAGACGCCATTGATGACCTTAGTGCTTGCTTGTCCGAGC            
JMSF032C12+           TTGAGCA-AAAGACGCCATTGATGACCTTAGTGCTTGCTTGTCCGAGCTGTAATGAAGAT
JMFS038D06+           TTGAGCAGAAAGACGCCATTGATGACCTTAGTGCTTGCTTGTCCGAGCTGTAATGAAGAT
JMFF010D06+           TTGAGCAGAAAGACGCCATTGATGACCTTAGTGCTTGCTTGTCCGAGCTGT         
JMFS036A12+           TTGAGCAGAAAGACGCCATTGATGACCTTAGTGCTTGCTTGTCCGAGCTGTAATGAAGAT
JMSF008D18+           TTGAGCAGAAAGACGCCATTGATGACCTTAGTGCTTGCTTGTCCGAGCTGTAATGAAGAT
JMSF029E06+           TTGAGCAGAAAGACGCCATTGATGACCTTAGTGCTTGCTTGTCCGAGCTGTAATGAAGAT
                      ____________________________________________________________
consensus             TTGAGCAGAAAGACGCCATTGATGACCTTAGTGCTTGCTTGTCCGAGCTGTAATGAAGAT
 
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JMSF032C12+           AACAAC                                                      
JMFS038D06+           AACAACGGGAGGAGAAAGGATAGACGTTACAATTTACAACGAGAGCTGA           
JMFS036A12+           AACAACGGGAGGAGAAAGGATAGACGTTACAATTTACAACGAGAGCTGA           
JMSF008D18+           AACAACGGGAGGAGAAAGGATAGACGTTACAATTTACAACGAGAGCTGACTGGGCA    
JMSF029E06+           AACAACGGGAGGAGAAAGGATAGACGTTACAATTTACAACGAGAGCTGACTGGGCACCGC
                      ____________________________________________________________
consensus             AACAACGGGAGGAGAAAGGATAGACGTTACAATTTACAACGAGAGCTGACTGGGCACCGC