Contig 006563:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF028H24Sequence671006563 (2)gb|KDO37773.1|1e-85hypothetical protein CISIN_1g028408mg [Citrus sinensis]661006563 (2)gb|KDO37773.1|8e-87hypothetical protein CISIN_1g028408mg [Citrus sinensis]

Alignment

This contig is upended


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rJMSF028H24-           TAAATGTGTGTTCATCCATAAGAAGTTGAATGTTACATATACAATGACTCAAACAACTG
                      ____________________________________________________________
consensus              TAAATGTGTGTTCATCCATAAGAAGTTGAATGTTACATATACAATGACTCAAACAACTG
 
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rJMSF028H24-          AGGTACATTGAAGTCACCAAGCAAAGCTGGAAAATTACAGGCATACATCTTTAATGCCAC
                      ____________________________________________________________
consensus             AGGTACATTGAAGTCACCAAGCAAAGCTGGAAAATTACAGGCATACATCTTTAATGCCAC
 
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rJMSF028H24-          AGATTCACATCCTTCCTGTCCACCCTTTGATACTTCCTATTTTGGTTTCAATTTCAAGGC
JMSF028H24+                                                            AATTTCAAGGC
                      ____________________________________________________________
consensus             AGATTCACATCCTTCCTGTCCACCCTTTGATACTTCCTATTTTGGTTTCAATTTCAAGGC
 
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rJMSF028H24-          AGCACTATTGATGCAGTAGCGTTTTCCAGTAGGTTCGGGGCCATCGTCAAATACATGACC
JMSF028H24+           AGCACTATTGATGCAGTAGCGTTTTCCAGTAGGTTCGGGGCCATCGTCAAATACATGACC
                      ____________________________________________________________
consensus             AGCACTATTGATGCAGTAGCGTTTTCCAGTAGGTTCGGGGCCATCGTCAAATACATGACC
 
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rJMSF028H24-          TAGATGAGCATCACAAGCTGCACACAAAACTTCCTGGCGAGGCATGAAAATGATGGACAA
JMSF028H24+           TAGATGAGCATCACAAGCTGCACACAAAACTTCCTGGCGAGGCATGAAAATGATGGACAA
                      ____________________________________________________________
consensus             TAGATGAGCATCACAAGCTGCACACAAAACTTCCTGGCGAGGCATGAAAATGATGGACAA
 
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rJMSF028H24-          GTCTAACTTTGATTTCACATTGTTTCCAACAGGCTTGTAATACGATGGCCACCCGGTTCC
JMSF028H24+           GTCTAACTTTGATTTCACATTGTTTCCAACAGGCTTGTAATACGATGGCCACCCGGTTCC
                      ____________________________________________________________
consensus             GTCTAACTTTGATTTCACATTGTTTCCAACAGGCTTGTAATACGATGGCCACCCGGTTCC
 
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rJMSF028H24-          ACTATCAAACTTGGTGGATGATTCGAAGAGTGGAGTGTCACAACAAACGCAATGATAAGT
JMSF028H24+           ACTATCAAACTTGGTGGATGATTCGAAGAGTGGAGTGTCACAACAAACGCAATGATAAGT
                      ____________________________________________________________
consensus             ACTATCAAACTTGGTGGATGATTCGAAGAGTGGAGTGTCACAACAAACGCAATGATAAGT
 
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rJMSF028H24-          GCCGGGAGTTTTGGTGTCCCAATATTCCCCAGTAAAAGCCCTCTCAGTACCCTTTTGCCG
JMSF028H24+           GCCGGGAGTTTTGGTGTCCCAATATTCCCCAGTAAAAGCCCTCTCAGTACCCTTTTGCCG
                      ____________________________________________________________
consensus             GCCGGGAGTTTTGGTGTCCCAATATTCCCCAGTAAAAGCCCTCTCAGTACCCTTTTGCCG
 
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rJMSF028H24-          TGTAATGTAAAATTGTTGTCCTGTCAGCCGCTTCTTCCACTCCTCATCACTAACTGAGCT
JMSF028H24+           TGTAATGTAAAATTGTTGTCCTGTCAGCCGCTTCTTCCACTCCTCATCACTAACTGAGCT
                      ____________________________________________________________
consensus             TGTAATGTAAAATTGTTGTCCTGTCAGCCGCTTCTTCCACTCCTCATCACTAACTGAGCT
 
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rJMSF028H24-          AAAATCTTTATTGCTGACCTCTGCATAAAAAAAATGCAAGGAATCATAAACACAATGAGA
JMSF028H24+           AAAATCTTTATTGCTGACCTCTGCATAAAAAAAATGCAAGGAATCATAAACACAATGAGA
                      ____________________________________________________________
consensus             AAAATCTTTATTGCTGACCTCTGCATAAAAAAAATGCAAGGAATCATAAACACAATGAGA
 
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rJMSF028H24-          AATCCTTTTGTATGTAGAGAGAGAGAGAGAGAGAGAGACCTTGAGCGCTGTCTGGTTTGG
JMSF028H24+           AATCCTTTTGTATGTAGAGAGAGAGAGAGAGAGAGAGACCTTGAGCGCTGTCTGGTTTGG
                      ____________________________________________________________
consensus             AATCCTTTTGTATGTAGAGAGAGAGAGAGAGAGAGAGACCTTGAGCGCTGTCTGGTTTGG
 
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rJMSF028H24-          GT                                                          
JMSF028H24+           GTGAAGAAGCAGAGGAGCCCATACCACGAATCAAGAAGGAAACTTTATTTCTTGGTTTGT
                      ____________________________________________________________
consensus             GTGAAGAAGCAGAGGAGCCCATACCACGAATCAAGAAGGAAACTTTATTTCTTGGTTTGT
 
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JMSF028H24+           TAAACGATCCAAAAGCTAAAGAAAATAGAGGTTTGCTATTCGACCCAGAAAGGGATTTGG
                      ____________________________________________________________
consensus             TAAACGATCCAAAAGCTAAAGAAAATAGAGGTTTGCTATTCGACCCAGAAAGGGATTTGG
 
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JMSF028H24+           ATGAAAGGTTAACCGGTGAGCTCACGCTACTAGTTATTATGCTGCGAGCAGCCATTGACC
                      ____________________________________________________________
consensus             ATGAAAGGTTAACCGGTGAGCTCACGCTACTAGTTATTATGCTGCGAGCAGCCATTGACC