Contig 006561:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031P14Sequence645006561 (4)ref|XP_004245533.1|4e-95PREDICTED: probable GABA transporter 2 [Solanum lycopersicum]757011103 (3)gb|AHF58601.1|8e-92proline transporter 4 [Chrysanthemum lavandulifolium]
JMFS097H05Sequence616006561 (4)ref|XP_004245533.1|1e-122PREDICTED: probable GABA transporter 2 [Solanum lycopersicum]
JMSF026A12Sequence689006561 (4)emb|CDP12134.1|1e-99unnamed protein product [Coffea canephora]741011103 (3)gb|AHF58601.1|3e-99proline transporter 4 [Chrysanthemum lavandulifolium]
JMSF028G14Sequence689006561 (4)emb|CDP12134.1|1e-99unnamed protein product [Coffea canephora]762011103 (3)ref|XP_009599656.1|5e-131PREDICTED: probable GABA transporter 2 isoform X3 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF031P14+ GGAC
                      ____________________________________________________________
consensus GGAC
 
. : . : . : . : . : . :
JMFS097H05+ TTCCAGCACGAATGCAAGCACCAACTACAAGGAAAGTGTAGCCCAAACTCAGGAATAGG
JMFF031P14+ ATTCCAGCACGAATGCAAGCACCAACTACAAGGAAAGTGTAGCCCAAACTCAGGAATAGG
                      ____________________________________________________________
consensus ATTCCAGCACGAATGCAAGCACCAACTACAAGGAAAGTGTAGCCCAAACTCAGGAATAGG
 
. : . : . : . : . : . :
JMFS097H05+ GAAACCAGGTTGATATGCCTGAGGGAGTGGAAGGATGGAAACTGCGAGAGAACTATCTGG
JMFF031P14+ GAAACCAGGTTGATATGCCTGAGGGAGTGGAAGGATGGAAACTGCGAGAGAACTATCTGG
JMSF026A12+ AAGGATGGAAACTGCGAGAGAACTATCTGG
JMSF028G14+ AAGGATGGAAACTGCGAGAGAACTATCTGG
                      ____________________________________________________________
consensus GAAACCAGGTTGATATGCCTGAGGGAGTGGAAGGATGGAAACTGCGAGAGAACTATCTGG
 
. : . : . : . : . : . :
JMFS097H05+ ACTCCCGTTACTATTGCTATGAAGTCATACAACTTCAACGA-CCCATGGGGTGAAAGGTT
JMFF031P14+ ACTCCCGTTACTATTGCTATGAAGTCATACAACTTCAACGACCCCATGGGGTGAAAGGTT
JMSF026A12+ ACTCCCGTTACTATTGCTATGAAGTCATACAACTTCAACGA-CCCATGGGGTGAAAGGTT
JMSF028G14+ ACTCCCGTTACTATTGCTATGAAGTCATACAACTTCAACGA-CCCATGGGGTGAAAGGTT
                      ____________________________________________________________
consensus ACTCCCGTTACTATTGCTATGAAGTCATACAACTTCAACGA-CCCATGGGGTGAAAGGTT
 
. : . : . : . : . : . :
JMFS097H05+ CGAGTACATGATCTGGATGCATTCTCCAGCAAGCAAAATTGCTCCTATGCTAATTCCAGT
JMFF031P14+ CGAGTACATGATCTGGATGCATTCTCCAGCAAGCAAAATTGCTCCTATGCTAATTCCAGT
JMSF026A12+ CGAGTACATGATCTGGATGCATTCTCCAGCAAGCAAAATTGCTCCTATGCTAATTCCAGT
JMSF028G14+ CGAGTACATGATCTGGATGCATTCTCCAGCAAGCAAAATTGCTCCTATGCTAATTCCAGT
                      ____________________________________________________________
consensus CGAGTACATGATCTGGATGCATTCTCCAGCAAGCAAAATTGCTCCTATGCTAATTCCAGT
 
. : . : . : . : . : . :
JMFS097H05+ GTTAATGGCTGTTTGAATGAATATTACAAAATAAAACATCCATCCAGAACCTAAAACGTC
JMFF031P14+ GTTAATGGCTGTTTGAATGAATATTACAAAATAAAACATCCATCCAGAACCTAAAACGTC
JMSF026A12+ GTTAATGGCTGTTTGAATGAATATTACAAAATAAAACATCCATCCAGAACCTAAAACGTC
JMSF028G14+ GTTAATGGCTGTTTGAATGAATATTACAAAATAAAACATCCATCCAGAACCTAAAACGTC
                      ____________________________________________________________
consensus GTTAATGGCTGTTTGAATGAATATTACAAAATAAAACATCCATCCAGAACCTAAAACGTC
 
. : . : . : . : . : . :
JMFS097H05+ GGCGGCGAGCTCGCGGAAGCGGATGTGGCGACGGCCGGACTTCTCACAGTGTTCAAGCAC
JMFF031P14+ GGCGGCGAGCTCGCGGAAGCGGATGTGGCGACGGCCGGACTTCTCACAGTGTTCAAGCAC
JMSF026A12+ GGCGGCGAGCTCGCGGAAGCGGATGTGGCGACGGCCGGACTTCTCACAGTGTTCAAGCAC
JMSF028G14+ GGCGGCGAGCTCGCGGAAGCGGATGTGGCGACGGCCGGACTTCTCACAGTGTTCAAGCAC
                      ____________________________________________________________
consensus GGCGGCGAGCTCGCGGAAGCGGATGTGGCGACGGCCGGACTTCTCACAGTGTTCAAGCAC
 
. : . : . : . : . : . :
JMFS097H05+ CAGAGACATGAGATAGTAGGAGTAGAAGGTCACCACTCCCATGGCGGTGAGGCAGAGGAA
JMFF031P14+ CAGAGACATGAGATAGTAGGAGTAGAAGGTCACCACTCCCATGGCGGTGAGGCAGAGGAA
JMSF026A12+ CAGAGACATGAGATAGTAGGAGTAGAAGGTCACCACTCCCATGGCGGTGAGGCAGAGGAA
JMSF028G14+ CAGAGACATGAGATAGTAGGAGTAGAAGGTCACCACTCCCATGGCGGTGAGGCAGAGGAA
                      ____________________________________________________________
consensus CAGAGACATGAGATAGTAGGAGTAGAAGGTCACCACTCCCATGGCGGTGAGGCAGAGGAA
 
. : . : . : . : . : . :
JMFS097H05+ CCCCAGGCCCCAACCCAGCCCCCGGAACGCGTAAGGCAGAGTCAGTATAGAGGGCCCCAC
JMFF031P14+ CCCCAGGCCCCAACCCAGCCCCCGGAACGCGTAAGGCAGAGTCAGTATAGAGGGCCCCAC
JMSF026A12+ CCCCAGGCCCCAACCCAGCCCCCGGAACGCGTAAGGCAGAGTCAGTATAGAGGGCCCCAC
JMSF028G14+ CCCCAGGCCCCAACCCAGCCCCCGGAACGCGTAAGGCAGAGTCAGTATAGAGGGCCCCAC
                      ____________________________________________________________
consensus CCCCAGGCCCCAACCCAGCCCCCGGAACGCGTAAGGCAGAGTCAGTATAGAGGGCCCCAC
 
. : . : . : . : . : . :
JMFS097H05+ TATCGCCGTCGTCAGGTGAAATCCAGCGTGCCACCATTCCCCTTTGGATTCCAGCACGAA
JMFF031P14+ TATCGCCGTCGTCAGGTGAAATCCAGCGTGCCACCATTCCCCTTTGGATTCCAGCACGAA
JMSF026A12+ TATCGCCGTCGTCAGGTGAAATCCAGCGTGCCACCATTCCCCTTTGGATTCCAGCACGAA
JMSF028G14+ TATCGCCGTCGTCAGGTGAAATCCAGCGTGCCACCATTCCCCTTTGGATTCCAGCACGAA
                      ____________________________________________________________
consensus TATCGCCGTCGTCAGGTGAAATCCAGCGTGCCACCATTCCCCTTTGGATTCCAGCACGAA
 
. : . : . : . : . : . :
JMFS097H05+ CACCGCTCCGGCGTCGTTATCACGGCGCTCTTCCAGAAACGCGTCGCTCCGAGGAGGCTC
JMFF031P14+ CACCGCTCCGGCGTCGTTATCACGGCGCTCTTCCAGAAACGCGTCGCTCCGAGGAGGCTC
JMSF026A12+ CACCGCTCCGGCGTCGTTATCACGGCGCTCTTCCAGAAACGCGTCGCTCCGAGGAGGCTC
JMSF028G14+ CACCGCTCCGGCGTCGTTATCACGGCGCTCTTCCAGAAACGCGTCGCTCCGAGGAGGCTC
                      ____________________________________________________________
consensus CACCGCTCCGGCGTCGTTATCACGGCGCTCTTCCAGAAACGCGTCGCTCCGAGGAGGCTC
 
. : . : . : . : . : . :
JMFS097H05+ CGCCATAAACGCGCCCTG
JMFF031P14+ CGCCATAAACGCGCCCTGTTGATCAGTACAAATACAAACTT
JMSF026A12+ CGCCATAAACGCGCCCTGTTGATCAGTACAAATACAAACTTATACGCGCTATTCGATTTC
JMSF028G14+ CGCCATAAACGCGCCCTGTTGATCAGTACAAATACAAACTTATACGCGCTATTCGATTTC
                      ____________________________________________________________
consensus CGCCATAAACGCGCCCTGTTGATCAGTACAAATACAAACTTATACGCGCTATTCGATTTC
 
. : . : . : . : . : . :
JMSF026A12+ ACTCCGTATAAGCAGTTAAGAAGAAGAAGAAGAGTGGACGGAAAGGCGGAGGCGGATGCG
JMSF028G14+ ACTCCGTATAAGCAGTTAAGAAGAAGAAGAAGAGTGGACGGAAAGGCGGAGGCGGATGCG
                      ____________________________________________________________
consensus ACTCCGTATAAGCAGTTAAGAAGAAGAAGAAGAGTGGACGGAAAGGCGGAGGCGGATGCG
 
. : . : . : . : . : . :
JMSF026A12+ TCGATAAGACTCTACAGAGACGTTTATTGGCAGTTATGGGAAGAAGAAGAATAGAAGA
JMSF028G14+ TCGATAAGACTCTACAGAGACGTTTATTGGCAGTTATGGGAAGAAGAAGAATAGAAGACC
                      ____________________________________________________________
consensus TCGATAAGACTCTACAGAGACGTTTATTGGCAGTTATGGGAAGAAGAAGAATAGAAGACC