Contig 006560:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020M16Sequence572006560 (5)ref|XP_006362660.1|5e-21PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum]761001100 (5)ref|XP_009604136.1|7e-91PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento
JMSF026O10Sequence654006560 (5)ref|XP_006362660.1|4e-58PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum]758001100 (5)ref|XP_009604136.1|1e-96PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento
JMSF028G04Sequence656006560 (5)emb|CDP05133.1|4e-36unnamed protein product [Coffea canephora]725001100 (5)ref|XP_009604135.1|5e-95PREDICTED: uncharacterized protein At3g49140-like isoform X1 [Nicotiana tomento
JMSF031H05Sequence573006560 (5)ref|XP_006362660.1|7e-13PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum]667001100 (5)ref|XP_009604136.1|2e-87PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento
JMSF039D08Sequence645006560 (5)ref|XP_006362660.1|1e-50PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum]914001100 (5)ref|XP_009604136.1|2e-130PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento

Alignment

This contig is upended


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JMSF026O10+                       TAATGACTCGATTTGAACTAGCATTTCTGCAGTATCTATCCCAATAGT
JMSF039D08+                                                                CAATAGT
                      ____________________________________________________________
consensus                         TAATGACTCGATTTGAACTAGCATTTCTGCAGTATCTATCCCAATAGT
 
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JMSF026O10+           AACTTGCACAAGGTTTTCTTCAGCTGTCAGAGTCTGCAGAATGTCTTCTTCATTCTTTAC
JMSF039D08+           AACTTGCACAAGGTTTTCTTCAGCTGTCAGAGTCTGCAGAATGTCTTCTTCATTCTTTAC
                      ____________________________________________________________
consensus             AACTTGCACAAGGTTTTCTTCAGCTGTCAGAGTCTGCAGAATGTCTTCTTCATTCTTTAC
 
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JMSF026O10+           TTGAAAGTAAATATTTCCATGTTCATCAGTTACAAAAGGCAAATCAGGCCAGAAAATGCT
JMSF039D08+           TTGAAAGTAAATATTTCCATGTTCATCAGTTACAAAAGGCAAATCAGGCCAGAAAATGCT
JMSF028G04+               AAGTAAATATTTCCATGTTCATCAGTTACAAAAGGCAAATCAGGCCAGAAAATGCT
                      ____________________________________________________________
consensus             TTGAAAGTAAATATTTCCATGTTCATCAGTTACAAAAGGCAAATCAGGCCAGAAAATGCT
 
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JMSF031H05+                                                     TGCTTTGCTGTTCACCTC
JMSF026O10+           CTCGCATTCTACATCGCTGACCAAACCTGTTAGCATAAGTGTTGCTTTGCTGTTCACCTC
JMSF039D08+           CTCGCATTCTACATCGCTGACCAAACCTGTTAGCATAAGTGTTGCTTTGCTGTTCACCTC
JMFF020M16+                                      TGTTAGCATAAGTGTTGCTTTGCTGTTCACCTC
JMSF028G04+           CTCGCATTCTACATCGCTGACCAAACCTGTTAGCATAAGTGTTGCTTTGCTGTTCACCTC
                      ____________________________________________________________
consensus             CTCGCATTCTACATCGCTGACCAAACCTGTTAGCATAAGTGTTGCTTTGCTGTTCACCTC
 
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JMSF031H05+           AATGATAGTTNTGGTAGTTTCAGCAGGCGTGAGNTGCGCTTCACCGTTCACCGTCAACTC
JMSF026O10+           AATGATAGTTCTGGTAGTTTCAGCAGGCGTGAGCTGCGCTTCACCGTTCACCGTCAACTC
JMSF039D08+           AATGATAGTTCTGGTAGTTTCAGCAGGCGTGAGCTGCGCTTCACCGTTCACCGTCAACTC
JMFF020M16+           AATGATAGTTCTGGTAGTTTCAGCAGGCGTGAGCTGCGCTTCACCGTCCACCGTCAACTC
JMSF028G04+           AATGATAGTTCTGGTAGTTTCAGCAGGCGTGAGCTGCGCTTCACCGTTCACCGTCAACTC
                      ____________________________________________________________
consensus             AATGATAGTTCTGGTAGTTTCAGCAGGCGTGAGCTGCGCTTCACCGTTCACCGTCAACTC
 
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JMSF031H05+           CGACTCCGCAATGTCCTCGAACGGATGATATCTCATAGGCTTCGCGCTCTGCTTCACCGG
JMSF026O10+           CGACTCCGCAATGTCCTCGAACGGATGATATCTCATAGGCTTCGCGCTCTGCTTCACCGG
JMSF039D08+           CGACTCCGCAATGTCCTCGAACGGATGATATCTCATAGGCTTCGCGCTCTGCTTCACCGG
JMFF020M16+           CGACTCCGCAATGTCCTCGAACGGATGATATCTCATAGGCTTCGCGCTCTGCTTCACCGG
JMSF028G04+           CGACTCCGCAATGTCCTCGAACGGATGATATCTCATAGGCTTCGCGCTCTGCTTCACCGG
                      ____________________________________________________________
consensus             CGACTCCGCAATGTCCTCGAACGGATGATATCTCATAGGCTTCGCGCTCTGCTTCACCGG
 
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JMSF031H05+           CTCCGACCCGGAAGAGCTGGATTGCTCCTTCGCGGAAGCCCTAATTCCATTCCTTTCCCT
JMSF026O10+           CTCCGACCCGGAAGAGCTGGATTGCTCCTTCGCGGAAGCCCTAATTCCATTCCTTTCCCT
JMSF039D08+           CTCCGACCCGGAAGAGCTGGATTGCTCCTTCGCGGAAGCCCTAATTCCATTCCTTTCCCT
JMFF020M16+           CTCCGACCCGGAAGAGCTGGATTGCTCCTTCGCGGAAGCCCTAATTCCATTCCTTTCCCT
JMSF028G04+           CTCCGACCCGGAAGAGCTGGATTGCTCCTTCGCGGAAGCCCTAATTCCATTCCTTTCCCT
                      ____________________________________________________________
consensus             CTCCGACCCGGAAGAGCTGGATTGCTCCTTCGCGGAAGCCCTAATTCCATTCCTTTCCCT
 
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JMSF031H05+           CCAGAACCTCTTCCCGCAAGAAGTTTCCGTCAATCCCCCAACTCTATTTCGATAGATGCA
JMSF026O10+           CCAGAACCTCTTCCCGCAAGAAGTTTCCGTCAATCCCCCAACTCTATTTCGATAGATGCA
JMSF039D08+           CCAGAACCTCTTCCCGCAAGAAGTTTCCGTCAATCCCCCAACTCTATTTCGATAGATGCA
JMFF020M16+           CCAGAACCTCTTCCCGCAAGAAGTTTCCGTCAATCCCCCAACTCTATTTCGATAGATGCA
JMSF028G04+           CCAGAACCTCTTCCCGCAAGAAGTTTCCGTCAATCCCCCAACTCTATTTCGATAGATGCA
                      ____________________________________________________________
consensus             CCAGAACCTCTTCCCGCAAGAAGTTTCCGTCAATCCCCCAACTCTATTTCGATAGATGCA
 
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JMSF031H05+           TAATCCGGTGGAGTGTGAGAGCCGGCGGCAGAAGTTCCCGTATGAAATTTGGACAGAGAC
JMSF026O10+           TAATCCGGTGGAGTGTGAGAGCCGGCGGCAGAAGTTCCCGTATGAAATTTGGACAGAGAC
JMSF039D08+           TAATCCGGTGGAGTGTGAGAGCCGGCGGCAGAAGTTCCCGTATGAAATTTGGACAGAGAC
JMFF020M16+           TAATCCGGTGGAGTGTGAGAGCCGGCGGCAGAAGTTCCCGTATGAAATTTGGACAGAGAC
JMSF028G04+           TAATCCGGTGGAGTGTGAGAGCCGGCGGCAGAAGTTCCCGTATGAAATTTGGACAGAGAC
                      ____________________________________________________________
consensus             TAATCCGGTGGAGTGTGAGAGCCGGCGGCAGAAGTTCCCGTATGAAATTTGGACAGAGAC
 
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JMSF031H05+           AGCGGCGGCGGGTTCCAACATCAGCATTTTACTTTGATTTTATATGAT            
JMSF026O10+           AGCGGCGGCGGGTTCCAACATCAGCATTTTACTTTGATTTTATATGATCAATTCTTATTG
JMSF039D08+           AGCGGCGGCGGGTTCCAACATCAGCATTTTACTTTGATTTTATATGATCAATTCTTATTG
JMFF020M16+           AGCGGCGGCGGGTTCCAACATCAGCATTTTACTTTGATTTTATATGATCAATTCTTATTG
JMSF028G04+           AGCGGCGGCGGGTTCCAACATCAGCATTTTACTTTGATTTTATATGATCAATTCTTATTG
                      ____________________________________________________________
consensus             AGCGGCGGCGGGTTCCAACATCAGCATTTTACTTTGATTTTATATGATCAATTCTTATTG
 
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JMSF026O10+           AGATCTGGGCAATGAATAAATGCAAGAGAAAAGAATAAGAAGAAATATTGAAAGATTGTG
JMSF039D08+           AGATCTGGGCAATGAATAAATGCAAGAGAAAAGAATAAGAAGAAATATTGAAAGATTGTG
JMFF020M16+           AGATCTGGGCAATGAATAAATGCAAGAGAAAAGAATAAGAAGAAATATTGAAAGATTGTG
JMSF028G04+           AGATCTGGGCAATGAATAAATGCAAGAGAAAAGAATAAGAAGAAATATTGAAAGATTGTG
                      ____________________________________________________________
consensus             AGATCTGGGCAATGAATAAATGCAAGAGAAAAGAATAAGAAGAAATATTGAAAGATTGTG
 
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JMSF026O10+           CGATT                                                       
JMSF039D08+           CGATTAGCTTCCAAGCTTTGATTGGAAGCGTGAGTAT                       
JMFF020M16+           CGATTAGCTTCCAAGCTTTGATTGGAAGCGTGAGTATGATGAATAGGTCGTGTGGTTATC
JMSF028G04+           CGATTAGCTTCCAAGCTTTGATTGGAAGCGTGAGTATGATGAATAGGTCGTGTGGTTATC
                      ____________________________________________________________
consensus             CGATTAGCTTCCAAGCTTTGATTGGAAGCGTGAGTATGATGAATAGGTCGTGTGGTTATC
 
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JMFF020M16+           TTTTATCCGTTAAGCTGTTCTCTACATTGACCCATCATCCATGCACCTTTTCATC     
JMSF028G04+           TTTTATCCGTTAAGCTGTTCTCTACATTGACCCATCATCCATGCACCTTTTCATCTCCAG
                      ____________________________________________________________
consensus             TTTTATCCGTTAAGCTGTTCTCTACATTGACCCATCATCCATGCACCTTTTCATCTCCAG