Contig 006560:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020M16Sequence572006560 (5)ref|XP_006362660.1|5e-21PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum]761001100 (5)ref|XP_009604136.1|7e-91PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento
JMSF026O10Sequence654006560 (5)ref|XP_006362660.1|4e-58PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum]758001100 (5)ref|XP_009604136.1|1e-96PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento
JMSF028G04Sequence656006560 (5)emb|CDP05133.1|4e-36unnamed protein product [Coffea canephora]725001100 (5)ref|XP_009604135.1|5e-95PREDICTED: uncharacterized protein At3g49140-like isoform X1 [Nicotiana tomento
JMSF031H05Sequence573006560 (5)ref|XP_006362660.1|7e-13PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum]667001100 (5)ref|XP_009604136.1|2e-87PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento
JMSF039D08Sequence645006560 (5)ref|XP_006362660.1|1e-50PREDICTED: uncharacterized protein At3g49140-like [Solanum tuberosum]914001100 (5)ref|XP_009604136.1|2e-130PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Nicotiana tomento

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF026O10+ TAATGACTCGATTTGAACTAGCATTTCTGCAGTATCTATCCCAATAGT
JMSF039D08+ CAATAGT
                      ____________________________________________________________
consensus TAATGACTCGATTTGAACTAGCATTTCTGCAGTATCTATCCCAATAGT
 
. : . : . : . : . : . :
JMSF026O10+ AACTTGCACAAGGTTTTCTTCAGCTGTCAGAGTCTGCAGAATGTCTTCTTCATTCTTTAC
JMSF039D08+ AACTTGCACAAGGTTTTCTTCAGCTGTCAGAGTCTGCAGAATGTCTTCTTCATTCTTTAC
                      ____________________________________________________________
consensus AACTTGCACAAGGTTTTCTTCAGCTGTCAGAGTCTGCAGAATGTCTTCTTCATTCTTTAC
 
. : . : . : . : . : . :
JMSF026O10+ TTGAAAGTAAATATTTCCATGTTCATCAGTTACAAAAGGCAAATCAGGCCAGAAAATGCT
JMSF039D08+ TTGAAAGTAAATATTTCCATGTTCATCAGTTACAAAAGGCAAATCAGGCCAGAAAATGCT
JMSF028G04+ AAGTAAATATTTCCATGTTCATCAGTTACAAAAGGCAAATCAGGCCAGAAAATGCT
                      ____________________________________________________________
consensus TTGAAAGTAAATATTTCCATGTTCATCAGTTACAAAAGGCAAATCAGGCCAGAAAATGCT
 
. : . : . : . : . : . :
JMSF031H05+ TGCTTTGCTGTTCACCTC
JMSF026O10+ CTCGCATTCTACATCGCTGACCAAACCTGTTAGCATAAGTGTTGCTTTGCTGTTCACCTC
JMSF039D08+ CTCGCATTCTACATCGCTGACCAAACCTGTTAGCATAAGTGTTGCTTTGCTGTTCACCTC
JMFF020M16+ TGTTAGCATAAGTGTTGCTTTGCTGTTCACCTC
JMSF028G04+ CTCGCATTCTACATCGCTGACCAAACCTGTTAGCATAAGTGTTGCTTTGCTGTTCACCTC
                      ____________________________________________________________
consensus CTCGCATTCTACATCGCTGACCAAACCTGTTAGCATAAGTGTTGCTTTGCTGTTCACCTC
 
. : . : . : . : . : . :
JMSF031H05+ AATGATAGTTNTGGTAGTTTCAGCAGGCGTGAGNTGCGCTTCACCGTTCACCGTCAACTC
JMSF026O10+ AATGATAGTTCTGGTAGTTTCAGCAGGCGTGAGCTGCGCTTCACCGTTCACCGTCAACTC
JMSF039D08+ AATGATAGTTCTGGTAGTTTCAGCAGGCGTGAGCTGCGCTTCACCGTTCACCGTCAACTC
JMFF020M16+ AATGATAGTTCTGGTAGTTTCAGCAGGCGTGAGCTGCGCTTCACCGTCCACCGTCAACTC
JMSF028G04+ AATGATAGTTCTGGTAGTTTCAGCAGGCGTGAGCTGCGCTTCACCGTTCACCGTCAACTC
                      ____________________________________________________________
consensus AATGATAGTTCTGGTAGTTTCAGCAGGCGTGAGCTGCGCTTCACCGTTCACCGTCAACTC
 
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JMSF031H05+ CGACTCCGCAATGTCCTCGAACGGATGATATCTCATAGGCTTCGCGCTCTGCTTCACCGG
JMSF026O10+ CGACTCCGCAATGTCCTCGAACGGATGATATCTCATAGGCTTCGCGCTCTGCTTCACCGG
JMSF039D08+ CGACTCCGCAATGTCCTCGAACGGATGATATCTCATAGGCTTCGCGCTCTGCTTCACCGG
JMFF020M16+ CGACTCCGCAATGTCCTCGAACGGATGATATCTCATAGGCTTCGCGCTCTGCTTCACCGG
JMSF028G04+ CGACTCCGCAATGTCCTCGAACGGATGATATCTCATAGGCTTCGCGCTCTGCTTCACCGG
                      ____________________________________________________________
consensus CGACTCCGCAATGTCCTCGAACGGATGATATCTCATAGGCTTCGCGCTCTGCTTCACCGG
 
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JMSF031H05+ CTCCGACCCGGAAGAGCTGGATTGCTCCTTCGCGGAAGCCCTAATTCCATTCCTTTCCCT
JMSF026O10+ CTCCGACCCGGAAGAGCTGGATTGCTCCTTCGCGGAAGCCCTAATTCCATTCCTTTCCCT
JMSF039D08+ CTCCGACCCGGAAGAGCTGGATTGCTCCTTCGCGGAAGCCCTAATTCCATTCCTTTCCCT
JMFF020M16+ CTCCGACCCGGAAGAGCTGGATTGCTCCTTCGCGGAAGCCCTAATTCCATTCCTTTCCCT
JMSF028G04+ CTCCGACCCGGAAGAGCTGGATTGCTCCTTCGCGGAAGCCCTAATTCCATTCCTTTCCCT
                      ____________________________________________________________
consensus CTCCGACCCGGAAGAGCTGGATTGCTCCTTCGCGGAAGCCCTAATTCCATTCCTTTCCCT
 
. : . : . : . : . : . :
JMSF031H05+ CCAGAACCTCTTCCCGCAAGAAGTTTCCGTCAATCCCCCAACTCTATTTCGATAGATGCA
JMSF026O10+ CCAGAACCTCTTCCCGCAAGAAGTTTCCGTCAATCCCCCAACTCTATTTCGATAGATGCA
JMSF039D08+ CCAGAACCTCTTCCCGCAAGAAGTTTCCGTCAATCCCCCAACTCTATTTCGATAGATGCA
JMFF020M16+ CCAGAACCTCTTCCCGCAAGAAGTTTCCGTCAATCCCCCAACTCTATTTCGATAGATGCA
JMSF028G04+ CCAGAACCTCTTCCCGCAAGAAGTTTCCGTCAATCCCCCAACTCTATTTCGATAGATGCA
                      ____________________________________________________________
consensus CCAGAACCTCTTCCCGCAAGAAGTTTCCGTCAATCCCCCAACTCTATTTCGATAGATGCA
 
. : . : . : . : . : . :
JMSF031H05+ TAATCCGGTGGAGTGTGAGAGCCGGCGGCAGAAGTTCCCGTATGAAATTTGGACAGAGAC
JMSF026O10+ TAATCCGGTGGAGTGTGAGAGCCGGCGGCAGAAGTTCCCGTATGAAATTTGGACAGAGAC
JMSF039D08+ TAATCCGGTGGAGTGTGAGAGCCGGCGGCAGAAGTTCCCGTATGAAATTTGGACAGAGAC
JMFF020M16+ TAATCCGGTGGAGTGTGAGAGCCGGCGGCAGAAGTTCCCGTATGAAATTTGGACAGAGAC
JMSF028G04+ TAATCCGGTGGAGTGTGAGAGCCGGCGGCAGAAGTTCCCGTATGAAATTTGGACAGAGAC
                      ____________________________________________________________
consensus TAATCCGGTGGAGTGTGAGAGCCGGCGGCAGAAGTTCCCGTATGAAATTTGGACAGAGAC
 
. : . : . : . : . : . :
JMSF031H05+ AGCGGCGGCGGGTTCCAACATCAGCATTTTACTTTGATTTTATATGAT
JMSF026O10+ AGCGGCGGCGGGTTCCAACATCAGCATTTTACTTTGATTTTATATGATCAATTCTTATTG
JMSF039D08+ AGCGGCGGCGGGTTCCAACATCAGCATTTTACTTTGATTTTATATGATCAATTCTTATTG
JMFF020M16+ AGCGGCGGCGGGTTCCAACATCAGCATTTTACTTTGATTTTATATGATCAATTCTTATTG
JMSF028G04+ AGCGGCGGCGGGTTCCAACATCAGCATTTTACTTTGATTTTATATGATCAATTCTTATTG
                      ____________________________________________________________
consensus AGCGGCGGCGGGTTCCAACATCAGCATTTTACTTTGATTTTATATGATCAATTCTTATTG
 
. : . : . : . : . : . :
JMSF026O10+ AGATCTGGGCAATGAATAAATGCAAGAGAAAAGAATAAGAAGAAATATTGAAAGATTGTG
JMSF039D08+ AGATCTGGGCAATGAATAAATGCAAGAGAAAAGAATAAGAAGAAATATTGAAAGATTGTG
JMFF020M16+ AGATCTGGGCAATGAATAAATGCAAGAGAAAAGAATAAGAAGAAATATTGAAAGATTGTG
JMSF028G04+ AGATCTGGGCAATGAATAAATGCAAGAGAAAAGAATAAGAAGAAATATTGAAAGATTGTG
                      ____________________________________________________________
consensus AGATCTGGGCAATGAATAAATGCAAGAGAAAAGAATAAGAAGAAATATTGAAAGATTGTG
 
. : . : . : . : . : . :
JMSF026O10+ CGATT
JMSF039D08+ CGATTAGCTTCCAAGCTTTGATTGGAAGCGTGAGTAT
JMFF020M16+ CGATTAGCTTCCAAGCTTTGATTGGAAGCGTGAGTATGATGAATAGGTCGTGTGGTTATC
JMSF028G04+ CGATTAGCTTCCAAGCTTTGATTGGAAGCGTGAGTATGATGAATAGGTCGTGTGGTTATC
                      ____________________________________________________________
consensus CGATTAGCTTCCAAGCTTTGATTGGAAGCGTGAGTATGATGAATAGGTCGTGTGGTTATC
 
. : . : . : . : . : . :
JMFF020M16+ TTTTATCCGTTAAGCTGTTCTCTACATTGACCCATCATCCATGCACCTTTTCATC
JMSF028G04+ TTTTATCCGTTAAGCTGTTCTCTACATTGACCCATCATCCATGCACCTTTTCATCTCCAG
                      ____________________________________________________________
consensus TTTTATCCGTTAAGCTGTTCTCTACATTGACCCATCATCCATGCACCTTTTCATCTCCAG