Contig 006558:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS003H08Sequence575006558 (4)ref|XP_009626763.1|2e-91PREDICTED: vesicle-fusing ATPase [Nicotiana tomentosiformis]
JMFS032C08Sequence594006558 (4)ref|XP_009626763.1|1e-92PREDICTED: vesicle-fusing ATPase [Nicotiana tomentosiformis]
JMSF027O20Sequence659006558 (4)ref|XP_009626763.1|1e-89PREDICTED: vesicle-fusing ATPase [Nicotiana tomentosiformis]707002881 (3)ref|XP_009759969.1|1e-112PREDICTED: vesicle-fusing ATPase [Nicotiana sylvestris] ref|XP_009759970.1| PRED
JMSF043B01Sequence827006558 (4)ref|XP_009626763.1|2e-140PREDICTED: vesicle-fusing ATPase [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF043B01+                                    GGTGGCCCATAAANGGAGCATTCCCTTAACATGCT
                      ____________________________________________________________
consensus                                      GGTGGCCCATAAANGGAGCATTCCCTTAACATGCT
 
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JMSF043B01+           TGATGCCAAGTTTAGATGCGACGTGTGGAGGAAAAACCCTGGAAGCAAAAGNTCTTCGAA
                      ____________________________________________________________
consensus             TGATGCCAAGTTTAGATGCGACGTGTGGAGGAAAAACCCTGGAAGCAAAAGNTCTTCGAA
 
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JMSF043B01+           ATATATCAGCAAACTCGGCACTCAAACCACCAATACCTAATGACTCCAGGTTGAACTCTT
                      ____________________________________________________________
consensus             ATATATCAGCAAACTCGGCACTCAAACCACCAATACCTAATGACTCCAGGTTGAACTCTT
 
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JMSF043B01+           TCTGCCTGAAAATGCTGCTACTAGCAGCTTCACGCTGGTTGGTTATCTTTATTCCACTTC
                      ____________________________________________________________
consensus             TCTGCCTGAAAATGCTGCTACTAGCAGCTTCACGCTGGTTGGTTATCTTTATTCCACTTC
 
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JMFS032C08+               TGCAGCTTCAAAAATAATATATGTCTCCGAAGAAAGTAGCCCTCTTTCAATTTTAT
JMSF043B01+           CATTTGCAGCTTCAAAAATAATATATGTCTCCGAAGAAAGTAGCCCTCTTTCAATTTTAT
JMFS003H08+                 CAGCTTCAAAAATAATATATGTCTCCGAAGAAAGTAGCCCTCTTTCAATTTTAT
JMSF027O20+               TGCAGCTTCAAAAATAATATATGTCTCCGAAGAAAGTAGCCCTCTTTCAATTTTAT
                      ____________________________________________________________
consensus             CATTTGCAGCTTCAAAAATAATATATGTCTCCGAAGAAAGTAGCCCTCTTTCAATTTTAT
 
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JMFS032C08+           TTGATTTTGAATGTCCCTCAATTTGAGCTTGATTAACAGTGAAGATATAACCATTGCCAT
JMSF043B01+           TTGATTTTGAATGTCCCTCAATTTGAGCTTGATTAACAGTGAAGATATAACCATTGCCAT
JMFS003H08+           TTGATTTTGAATGTCCCTCAATTTGAGCTTGATTAACAGTGAAGATATAACCATTGCCAT
JMSF027O20+           TTGATTTTGAATGTCGCTCAATTTGAGCTTGATTAACAGTGAAGATATAACCATTGCCAT
                      ____________________________________________________________
consensus             TTGATTTTGAATGTCCCTCAATTTGAGCTTGATTAACAGTGAAGATATAACCATTGCCAT
 
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JMFS032C08+           GGTATTCAAATGTCACCTTTTGTCCAGCTGTCATAACCTGATTTACAAATCTCTTTCGAA
JMSF043B01+           GGTATTCAAATGTCACCTTTTGTCCAGCTGTCATAACCTGATTTACAAATCTCTTTCGAA
JMFS003H08+           GGTATTCAAATGTCACCTTTTGTCCAGCTGTCATAACCTGATTTACAAATCTCTTTCGAA
JMSF027O20+           GGTATTCAAATGTCACCTTTTGTCCAGCTGTCATAACCTGATTTACAAATCTCTTTCGAA
                      ____________________________________________________________
consensus             GGTATTCAAATGTCACCTTTTGTCCAGCTGTCATAACCTGATTTACAAATCTCTTTCGAA
 
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JMFS032C08+           TTTGATTACCCATCTGAACAGCATCAACCTGCTCATCTTTTGTTCCCTTTCTTACAAAGT
JMSF043B01+           TTTGATTACCCATCTGAACAGCATCAACCTGCTCATCTTTTGTTCCCTTTCTTACAAAGT
JMFS003H08+           TTTGATTACCCATCTGAACAGCATCAACCTGCTCATCTTTTGTTCCCTTTCTTACAAAGT
JMSF027O20+           TTTGATTACCCATCTAAACAGCATCAACCTGCTCATCTTTTGTTCCCTTTCTTACAAAGT
                      ____________________________________________________________
consensus             TTTGATTACCCATCTGAACAGCATCAACCTGCTCATCTTTTGTTCCCTTTCTTACAAAGT
 
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JMFS032C08+           CCAATTCAAGGGTCAACAAAGCAAGATTGAAATCTTCAGGTGGGATGAATCTGCTCACAG
JMSF043B01+           CCAATTCAAGGGTCAACAAAGCAAGATTGAAATCTTCAGGTGGGATGAATCTGCTCACAG
JMFS003H08+           CCAATTCAAGGGTCAACAAAGCAAGATTGAAATCTTCAGGTGGGATGAATCTGCTCACAG
JMSF027O20+           CCAATTCAAGGGTCAACAAAGCAAGATTGAAATCTTCAGGTGGGATGAATCTGCTCACAG
                      ____________________________________________________________
consensus             CCAATTCAAGGGTCAACAAAGCAAGATTGAAATCTTCAGGTGGGATGAATCTGCTCACAG
 
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JMFS032C08+           GTATGGAGTCCCCAGTAGAAACCTTCGCATATCGGCGATGAATAACATTAAGACCAATTT
JMSF043B01+           GTATGGAGTCCCCAGTAGAAACCTTCGCATATCGGCGATGAATAACATTAAGACCAATTT
JMFS003H08+           GTATGGAGTCCCCAGTAGAAACCTTCGCATATCGGCGATGAATAACATTAAGACCAATTT
JMSF027O20+           GTATGGAGTCCCCAGTAGAAACCTTCGCATATCGGCGATGAATAACATTAAGACCAATTT
                      ____________________________________________________________
consensus             GTATGGAGTCCCCAGTAGAAACCTTCGCATATCGGCGATGAATAACATTAAGACCAATTT
 
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JMFS032C08+           GGCCATTGGAAATAGAATCATGCGCAGAAATGGAAAGAACGTAAGCATCGGCCACGATAG
JMSF043B01+           GGCCATTGGAAATAGAATCATGCGCAGAAATGGAAAGAACGTAAGCATCGGCCACGATAG
JMFS003H08+           GGCCATTGGAAATAGAATCATGCGCAGAAATGGAAAGAACGTAAGCATCGGCCACGATAG
JMSF027O20+           GGCCATNGGAAATAGAATCATGCGCAGAAATGGAAAGAACGTAAGCATCGGCCACGATAG
                      ____________________________________________________________
consensus             GGCCATTGGAAATAGAATCATGCGCAGAAATGGAAAGAACGTAAGCATCGGCCACGATAG
 
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JMFS032C08+           CGTAGGCCATTTTCGTCCCCGGAACGACAAAGTTCCGGAGATCTGCCTGGGAGCAATATG
JMSF043B01+           CGTAGGCCATTTTCGTCCCCGGAACGACAAAGTTCCGGAGATCTGCCTGGGAGCAATATG
JMFS003H08+           CGTAGGCCATTTTCGTCCCCGGAACGACAAAGTTCCGGAGATCTGCCTGGGAGCAATATG
JMSF027O20+           CGTAGGCCATTTTCGTCCCCGGAACGACAAAGTTCCGGAGATCTGCCTGGGAGCAATATG
                      ____________________________________________________________
consensus             CGTAGGCCATTTTCGTCCCCGGAACGACAAAGTTCCGGAGATCTGCCTGGGAGCAATATG
 
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JMFS032C08+           CGAAGTTGGTGTAGGCGAGATCTTTCGCCGGCGTGTTGGTCACGATCATCTCTAACGATG
JMSF043B01+           CGAAGTTGGTGTAGGCGAGATCTTTCGCCGGCGTGTTGGTCACGATCATCTCTAACGATG
JMFS003H08+           CGAAGTTGGTGTAGGCGAGATCTTTCGCCGGCGTGTTGGTCACGATCATCTCTAACGATG
JMSF027O20+           CGAAGTTGGTGTAGGCGAGATCTTTCGCCGGCGTGTTGGTCACGATCATCTCTAACGATG
                      ____________________________________________________________
consensus             CGAAGTTGGTGTAGGCGAGATCTTTCGCCGGCGTGTTGGTCACGATCATCTCTAACGATG
 
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JMFS032C08+           ACATCCGTGCCATTTCTGAAACTC                                    
JMSF043B01+           ACATCCGTGCCATTTCTGAAACTC                                    
JMFS003H08+           ACATCCGTGCCATTTCTGAAACTCGCTCTCAACCGAGATCA                   
JMSF027O20+           ACATCCGTGCCATTTCTGAAACTCGCTCTCAACCGAGATCAATCAACCGAAATCAGGAAT
                      ____________________________________________________________
consensus             ACATCCGTGCCATTTCTGAAACTCGCTCTCAACCGAGATCAATCAACCGAAATCAGGAAT
 
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JMSF027O20+           AGAATTTGAATATTGGAAACTTTTCGATTTGGATTTAAAATCTTTTTAGCTTTGATGCCC
                      ____________________________________________________________
consensus             AGAATTTGAATATTGGAAACTTTTCGATTTGGATTTAAAATCTTTTTAGCTTTGATGCCC