| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN003H05 | Sequence | 620 | 006555 (8) | ref|XP_011093406.1| | 2e-98 | PREDICTED: 50S ribosomal protein L3, chloroplastic-like [Sesamum indicum] | |||||
| JMFN005P17 | Sequence | 618 | 006555 (8) | ref|XP_011093406.1| | 1e-97 | PREDICTED: 50S ribosomal protein L3, chloroplastic-like [Sesamum indicum] | |||||
| JMFN007C17 | Sequence | 580 | 006555 (8) | ref|XP_011093406.1| | 4e-91 | PREDICTED: 50S ribosomal protein L3, chloroplastic-like [Sesamum indicum] | |||||
| JMSF005K14 | Sequence | 400 | 006555 (8) | gb|EYU42243.1| | 4e-45 | hypothetical protein MIMGU_mgv1a011536mg [Erythranthe guttata] | 251 | 007027 (5) | |||
| JMSF017I07 | Sequence | 254 | 006555 (8) | ref|XP_009794197.1| | 8e-11 | PREDICTED: 50S ribosomal protein L3, chloroplastic [Nicotiana sylvestris] | |||||
| JMSF027K07 | Sequence | 665 | 006555 (8) | ref|XP_011093406.1| | 4e-107 | PREDICTED: 50S ribosomal protein L3, chloroplastic-like [Sesamum indicum] | 771 | 006555 (8) | ref|XP_011093406.1| | 7e-141 | PREDICTED: 50S ribosomal protein L3, chloroplastic-like [Sesamum indicum] |
| JMSF048L04 | Sequence | 677 | 006555 (8) | ref|XP_011093406.1| | 2e-110 | PREDICTED: 50S ribosomal protein L3, chloroplastic-like [Sesamum indicum] | |||||
This contig is upended
. : . : . : . : . : . :
JMFN007C17+ A
____________________________________________________________
consensus A
. : . : . : . : . : . :
JMFN007C17+ TATAATTATATATCTTTCAAATTGAAAATATTGTTTCCATCAGAGCACCAAAAGAAGACG
rJMSF027K07- TATTGTTTCCATCAGAGCACCAAAAGAAGACG
____________________________________________________________
consensus TATAATTATATATCTTTCAAATTGAAAATATTGTTTCCATCAGAGCACCAAAAGAAGACG
. : . : . : . : . : . :
JMFN007C17+ AAAACGCTACTGGTTGAAAGAATACATTACATCAAATTCCGACAGTTGAGTACAAAAACG
rJMSF027K07- AAAACGCTACTGGTTGAAAGAATACATTACATCAAATTCCGACAGTTGAGTACAAAAACG
____________________________________________________________
consensus AAAACGCTACTGGTTGAAAGAATACATTACATCAAATTCCGACAGTTGAGTACAAAAACG
. : . : . : . : . : . :
JMFN007C17+ GGCTAGTTCTTTGGGATGTTTTTCCCTACAATCTTGGCGGGAGCGATTCTTAGAAGGTTT
rJMSF027K07- GGCTAGTTCTTTGGGATGTTTTTCCCTACAATCTTGGCGGGAGCGATTCTTAGAAGGTTT
____________________________________________________________
consensus GGCTAGTTCTTTGGGATGTTTTTCCCTACAATCTTGGCGGGAGCGATTCTTAGAAGGTTT
. : . : . : . : . : . :
JMFN007C17+ CCCGGCTTACCAGGAACAGCCCCTTTCACCATTACAATCCTAAGCTCATCATCAATCTTG
rJMSF027K07- CCCGGCTTACCAGGAACAGCCCCTTTCACCATTACAATCCTAAGCTCATCATCAATCTTG
____________________________________________________________
consensus CCCGGCTTACCAGGAACAGCCCCTTTCACCATTACAATCCTAAGCTCATCATCAATCTTG
. : . : . : . : . : . :
JMFN007C17+ ACAATCTTCAGCTTTCGGATCTTTGTCTTCGTCCCTCCCATTCTTCCAGGCATTTTCTTG
rJMSF027K07- ACAATCTTCAGCTTTCGGATCTTTGTCTTCGTCCCTCCCATTCTTCCAGGCATTTTCTTG
JMSF048L04+ TTCCAGGCATTTTCTTG
JMSF027K07+ TCTTG
____________________________________________________________
consensus ACAATCTTCAGCTTTCGGATCTTTGTCTTCGTCCCTCCCATTCTTCCAGGCATTTTCTTG
. : . : . : . : . : . :
JMFN007C17+ CCTTTATACACACGTCCAGGAGTCGTTCCAGCACCAATTGAACCGAGCTGTCTATGACTC
rJMSF027K07- CCTTTATACACACGTCCAGGAGTCGTTCCAGCACCAATTGAACCGAGCTGTCTATGACTC
JMSF048L04+ CCTTTATACACACGTCCAGGAGTCGTTCCAGCACCAATTGAACCGAGCTGTCTATGACTC
JMFN003H05+ GTCGTTCCAGCACCAATTGAACCGAGCTGTCTATGACTC
JMFN005P17+ TTCCAGCACCAATTGAACCGAGCTGTCTATGACTC
JMSF027K07+ CCTTTATACACACGTCCAGGAGTCGTTCCAGCACCAATTGAACCGAGCTGTCTATGACTC
____________________________________________________________
consensus CCTTTATACACACGTCCAGGAGTCGTTCCAGCACCAATTGAACCGAGCTGTCTATGACTC
. : . : . : . : . : . :
JMFN007C17+ TTCGATCCATGAGTCATAAGACCTCTCTTGAAATTATGTCTTTTGATTCCACCTTGAAAC
rJMSF027K07- TTCGATCCATGAGTCATAAGACCTCTCTTGAAATTATGTCTTTTGATTCCACCTTGAAAC
JMSF048L04+ TTCGATCCATGAGTCATAAGACCTCTCTTGAAATTATGTCTTTTGATTCCACCTTGAAAC
JMFN003H05+ TTCGATCCATGAGTCATAAGACCTCTCTTGAAATTATGTCTTTTGATTCCACCTTGAAAC
JMFN005P17+ TTCGATCCATGAGTCATAAGACCTCTCTTGAAATTATGTCTTTTGATTCCACCTTGAAAC
JMSF027K07+ TTCGATCCATGAGTCATAAGACCTCTCTTGAAATTATGTCTTTTGATTCCACCTTGAAAC
____________________________________________________________
consensus TTCGATCCATGAGTCATAAGACCTCTCTTGAAATTATGTCTTTTGATTCCACCTTGAAAC
. : . : . : . : . : . :
JMFN007C17+ CCTTTTCCAATGGTGGTACCGGAGACATCAACTAGGTCACCTTCGTTGAAGAGCTCGCTG
rJMSF027K07- CCTTTTCCAATGGTGGTACCGGAGACATCAACTAGGTCACCTTCGTTGAAGAGCTCGCTG
JMSF048L04+ CCTTTTCCAATGGTGGTACCGGAGACATCAACTAGGTCACCTTCGTTGAAGAGCTCGCTG
JMFN003H05+ CCTTTTCCAATGGTGGTACCGGAGACATCAACTAGGTCACCTTCGTTGAAGAGCTCGCTG
JMFN005P17+ CCTTTTCCAATGGTGGTACCGGAGACATCAACTAGGTCACCTTCGTTGAAGAGCTCGCTG
JMSF027K07+ CCTTTTCCAATGGTGGTACCGGAGACATCAACTAGGTCACCTTCGTTGAAGAGCTCGCTG
____________________________________________________________
consensus CCTTTTCCAATGGTGGTACCGGAGACATCAACTAGGTCACCTTCGTTGAAGAGCTCGCTG
. : . : . : . : . : . :
JMFN007C17+ AAGACCAGCTGCTGGTTGGGCTCGAAGCTGTCGACGGACGGGAGCCGGAACTCCTGCAGA
rJMSF027K07- AAGACCAGCTGCTGGTTGGGCTCGAAGCTGTCGACGGACGGGAGCCGGAACTCCTGCAGA
JMSF048L04+ AAGACCAGCTGCTGGTTGGGCTCGAAGCTGTCGACGGACGGGAGCCGGAACTCCTGCAGA
JMFN003H05+ AAGACCAGCTGCTGGTTGGGCTCGAAGCTGTCGACGGACGGGAGCCGGAACTCCTGCAGA
JMFN005P17+ AAGACCAGCTGCTGGTTGGGCTCGAAGCTGTCGACGGACGGGAGCCGGAACTCCTGCAGA
JMSF027K07+ AAGACCAGCTGCTGGTTGGGCTCGAAGCTGTCGACGGACGGGAGCCGGAACTCCTGCAGA
____________________________________________________________
consensus AAGACCAGCTGCTGGTTGGGCTCGAAGCTGTCGACGGACGGGAGCCGGAACTCCTGCAGA
. : . : . : . : . : . :
JMFN007C17+ TGGCGCAAGGGAATTATGCCGGATTTCTGAAGGTGTCCC
rJMSF027K07- TGGCGCAAGGGAATTATGCCGGATTTCTGAAGGTGTCCCATTTCGGGTTTGGTGAGTTTC
JMSF048L04+ TGGCGCAAGGGAATTATGCCGGATTTCTGAAGGTGTCCCATTTCGGGTTTGGTGAGTTTC
JMFN003H05+ TGGCGCAAGGGAATTATGCCGGATTTCTGAAGGTGTCCCATTTCGGGTTTGGTGAGTTTC
JMFN005P17+ TGGCGCAAGGGAATTATGCCGGATTTCTGAAGGTGTCCCATTTCGGGTTTGGTGAGTTTC
JMSF005K14+ TGCCGGATTTCTGAAGGTGTCCCATTTCGGGTTTGGTGAGTTTC
JMSF027K07+ TGGCGCAAGGGAATTATGCCGGATTTCTGAAGGTGTCCCATTTCGGGTTTGGTGAGTTTC
____________________________________________________________
consensus TGGCGCAAGGGAATTATGCCGGATTTCTGAAGGTGTCCCATTTCGGGTTTGGTGAGTTTC
. : . : . : . : . : . :
rJMSF027K07- CGGTCACGGACACGGCGGTACCCTACTTGGACGGCGTTGTAGCCGTCAATAGCATCGGTC
JMSF048L04+ CGGTCACGGACACGGCGGTACCCTACTTGGACGGCGTTGTAGCCGTCAATAGCATCGGTC
JMFN003H05+ CGGTCACGGACACGGCGGTACCCTACTTGGACGGCGTTGTAGCCGTCAATAGCATCGGTC
JMFN005P17+ CGGTCACGGACACGGCGGTACCCTACTTGGACGGCGTTGTAGCCGTCAATAGCATCGGTC
JMSF005K14+ CGGTCACGGACACGGCGGTACCCTACTTGGACGGCGTTGTAGCCGTCAATAGCATCGGTC
JMSF027K07+ CGGTCACGGACACGGCGGTACCCTACTTGGACGGCGTTGTAGCCGTCAATAGCATCGGTC
____________________________________________________________
consensus CGGTCACGGACACGGCGGTACCCTACTTGGACGGCGTTGTAGCCGTCAATAGCATCGGTC
. : . : . : . : . : . :
rJMSF027K07- TTGACCTGAGTGACAATGTTGCCCTCGCGGAATCCGATGACGGTGACGGGAACAACCGTG
JMSF048L04+ TTGACCTGAGTGACAATGTTGCCCTCGCGGAATCCGATGACGGTGACGGGAACAACCGTG
JMFN003H05+ TTGACCTGAGTGACAATGTTGCCCTCGCGGAATCCGATGACGGTGACGGGAACAACCGTG
JMFN005P17+ TTGACCTGAGTGACAATGTTGCCCTCGCGGAATCCGATGACGGTGACGGGAACAACCGTG
JMSF005K14+ TTGACCTGAGTGACAATGTTGCCCTCGCGGAATCCGATGACGGTGACGGGAACAACCGTG
JMSF017I07+ TGACGGGANCANCCGTG
JMSF027K07+ TTGACCTGAGTGACAATGTTGCCCTCGCGGAATCCGATGACGGTGACGGGAACAACCGTG
____________________________________________________________
consensus TTGACCTGAGTGACAATGTTGCCCTCGCGGAATCCGATGACGGTGACGGGAACAACCGTG
. : . : . : . : . : . :
rJMSF027K07- CCGGAGGGCTCGAAGAAGCTCATCATGCCGAGTTTCGTCGCCATTACGCCCACGCCGGCC
JMSF048L04+ CCGGAGGGCTCGAAGAAGCTCATCATGCCGAGTTTCGTCGCCATTACGCCCACGCCGGCC
JMFN003H05+ CCGGAGGGCTCGAAGAAGCTCATCATGCCGAGTTTCGTCGCCATTACGCCCACGCCGGCC
JMFN005P17+ CCGGAGGGCTCGAAGAAGCTCATCATGCCGAGTTTCGTCGCCATTACGCCCACGCCGGCC
JMSF005K14+ CCGGAGGGCTCGAAGAAGCTCATCATGCCGAGTTTCGTCGCCATTACGCCCACGCCGGCC
JMSF017I07+ CCNGAGGGCTCGAAGAAGCTCATCATNCCGAGTTTCGTCGCCATTACNCCCACGCCGGCC
JMSF027K07+ CCGGAGGGCTCGAAGAAGCTCATCATGCCGAGTTTCGTCGCCATTACGCCCACGCCGGCC
____________________________________________________________
consensus CCGGAGGGCTCGAAGAAGCTCATCATGCCGAGTTTCGTCGCCATTACGCCCACGCCGGCC
. : . : . : . : . : . :
rJMSF027K07- TCCATGGANGCCGTGATTG
JMSF048L04+ TCCATGGAGGCCGTGATTGGGGAGCAGGGGCGGCGGAGAGAGAGTGGTTTTTGGGGGTTG
JMFN003H05+ TCCATGGAGGCCGTGATTGGGGAGCAGGGGCGGCGGAGAGAGAGTGGTTTTTGGGGGTTG
JMFN005P17+ TCCATGGAGGCCGTGATTGGGGAGCAGGGGCGGCGGAGAGAGAGTGGTTTTTGGGGGTTG
JMSF005K14+ TCCATGGAGGCCGTGATTGGGGAGCAGGGGCGGCGGAGAGAGAGTGGTTTTTGGGGGTTG
JMSF017I07+ TCCATGGAGGCCGTGATTGGGNAGCAGGGGCGGCGGAGAGAGAGTGGTTTTTGGGGGTTG
JMSF027K07+ TCCATGGAGGCCGTGATTGGGGAGCAGGGGCGGCGGAGAGAGAGTGGTTTTTGGGGGTTG
____________________________________________________________
consensus TCCATGGAGGCCGTGATTGGGGAGCAGGGGCGGCGGAGAGAGAGTGGTTTTTGGGGGTTG
. : . : . : . : . : . :
JMSF048L04+ TGCGTGCGGAGAGGTAGGTGGACGAGGAACGAGGAGCGGAAAATCGTGGCGGCATTGGTG
JMFN003H05+ TGCGTGCGGAGAGGTAGGTGGACGAGGAACGAGGAGCGGAAAATCGTGGCGGCATTGGTG
JMFN005P17+ TGCGTGCGGAGAGGTAGGTGGACGAGGAACGAGGAGCGGAAAATCGTGGCGGCATTGGTG
JMSF005K14+ TGCGTGCGGAGAGGTAGGTGGACGAGGAACGAGGAGCGGAAAATCGTGGCGGCATTGGTG
JMSF017I07+ TGCGTGCGGAGAGGTAGGTGGACGAGGAACGAGGAGCGGAAAATCGTGGCGGCATTGGTG
JMSF027K07+ TGCGTGCGGAGAGGTAGGTGGACGAGGAACGAGGAGCGGAAAATCGTGGCGGCATTGGTG
____________________________________________________________
consensus TGCGTGCGGAGAGGTAGGTGGACGAGGAACGAGGAGCGGAAAATCGTGGCGGCATTGGTG
. : . : . : . : . : . :
JMSF048L04+ GCTACGGCGCCGGAGGGCGGCGGCGTTAGGCGGAGAGAAGAGATAGACATGGCGC
JMFN003H05+ GCTACGGCGCCGGAGGGCGGCGGCGTTAGGCGGAGAGAAGA
JMFN005P17+ GCTACGGCGCCGGAGGGCGGCGGCGTTAGGCGGAGAGAAGAGA
JMSF005K14+ GCTACGGCGCCGGAGGGCGGCGGCGTTAGGCGGAGAGAAGAGATAGACGTGGCGC
JMSF017I07+ GCTACGGCGCCGGAGGGCGGCGGCGTTAGGCGGAGAGAAGAGATAGACATGGCGC
JMSF027K07+ GCTACGGCGCCGGAGGGCGGCGGCGTTAGGCGGAGAGAAGAGATAGACATGGCGCTTCCC
____________________________________________________________
consensus GCTACGGCGCCGGAGGGCGGCGGCGTTAGGCGGAGAGAAGAGATAGACATGGCGCTTCCC