Contig 006554:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF027G01-                                                                    AT
                      ____________________________________________________________
consensus                                                                       AT
 
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rJMSF030G04-          CCAACTCAAAATCTGACATAGTATAACCCAAAATTCCCCAGAATGGGTGTAACAAAACTT
rJMSF027G01-          CCAACTCAAAATCTGACATAGTATAACCCAAAATTCCCCAGAATGGGTGTAACAAAACTT
                      ____________________________________________________________
consensus             CCAACTCAAAATCTGACATAGTATAACCCAAAATTCCCCAGAATGGGTGTAACAAAACTT
 
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rJMSF030G04-          TGATCTAATAGGTCTAAGAACTGCATAGAATCGCTTGCGCAATCTAGTGTTTTCACTCAT
rJMSF027G01-          TGATCTAATAGGTCTAAGAACTGCATAGAATCGCTTGCGCAATCTAGTGTTTTCACTCAT
                      ____________________________________________________________
consensus             TGATCTAATAGGTCTAAGAACTGCATAGAATCGCTTGCGCAATCTAGTGTTTTCACTCAT
 
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rJMSF030G04-          CGTCTTCATCTTCGTCTTCGTCTTGTCCTGCTGCAGCGTTAAGAGCATTTAGGCGCTCAA
rJMSF027G01-          CGTCTTCATCTTCGTCTTCGTCTTGTCCTGCTGCAGCGTTAAGAGCATTTAGGCGCTCAA
                      ____________________________________________________________
consensus             CGTCTTCATCTTCGTCTTCGTCTTGTCCTGCTGCAGCGTTAAGAGCATTTAGGCGCTCAA
 
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rJMSF030G04-          TCAGGTTAGCCCTCCTCTCGTCATAGGTGAGTTTCTTCAAATTGAACCTCTTGTGCTCCT
rJMSF027G01-          TCAGGTTAGCCCTCCTCTCGTCATAGGTGAGTTTCTTCAAATTGAACCTCTTGTGCTCCT
                      ____________________________________________________________
consensus             TCAGGTTAGCCCTCCTCTCGTCATAGGTGAGTTTCTTCAAATTGAACCTCTTGTGCTCCT
 
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rJMSF030G04-          TAGGCTGCGGCTTATCTGACTTCTTAGCTGTTGGATCAGCACGAATGGCAGCATGGACTT
rJMSF027G01-          TAGGCTGCGGCTTATCTGACTTCTTAGCTGTTGGATCAGCACGAATGGCAGCATGGACTT
                      ____________________________________________________________
consensus             TAGGCTGCGGCTTATCTGACTTCTTAGCTGTTGGATCAGCACGAATGGCAGCATGGACTT
 
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rJMSF030G04-          TCTTATAAACCTCCTCTATGTTATCTGCCTCGATACCTTTCTTGACATATTCGCTGAAGT
rJMSF027G01-          TCTTATAAACCTCCTCTATGTTATCTGCCTCGATACCTTTCTTGACATATTCGCTGAAGT
                      ____________________________________________________________
consensus             TCTTATAAACCTCCTCTATGTTATCTGCCTCGATACCTTTCTTGACATATTCGCTGAAGT
 
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rJMSF030G04-          GTGACTGATACTTCTCTGGCTCATCTTCCATCAATGTCTTCATATATCCAGCAACATGGC
rJMSF027G01-          GTGACTGATACTTCTCTGGCTCATCTTCCATCAATGTCTTCATATATCCAGCAACATGGC
JMSF027G01+                                                     TATATCCAGCAACATGGC
                      ____________________________________________________________
consensus             GTGACTGATACTTCTCTGGCTCATCTTCCATCAATGTCTTCATATATCCAGCAACATGGC
 
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rJMSF030G04-          CACCATAAATGTATTTCCGATGAAGCTCAGCATCGAGCTGCTTGGAGTCTTTTGAGAATC
rJMSF027G01-          CACCATAAATGTATTTCCGATGAAGCTCAGCATCGAGCTGCTTGGAGTCTTTTGAGAATC
JMSF027G01+           CACCATAAATGTATTTCCGATGAAGCTCAGCATCGAGCTGCTTGGAGTCTTTTGAGAATC
                      ____________________________________________________________
consensus             CACCATAAATGTATTTCCGATGAAGCTCAGCATCGAGCTGCTTGGAGTCTTTTGAGAATC
 
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rJMSF030G04-          CAGCAAATCTCTTGTCACTGTGAGGAATATCAAGACCACCATCCAATGCTCCCTTAAGTG
rJMSF027G01-          CAGCAAATCTCTTGTCACTGTGAGGAATATCAAGACCACCATCCAATGCTCCCTTAAGTG
JMSF027G01+           CAGCAAATCTCTTGTCACTGTGAGGAATATCAAGACCACCATCCAATGCTCCCTTAAGTG
                      ____________________________________________________________
consensus             CAGCAAATCTCTTGTCACTGTGAGGAATATCAAGACCACCATCCAATGCTCCCTTAAGTG
 
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rJMSF030G04-          CACCAAAAACACGGTTTCCAGTTGTTGTTCTGATTAGACCAACATCAAGGAGAGCACGGA
rJMSF027G01-          CACCAAAAACACGGTTTCCAGTTGTTGTTCTGATTAGACCAACATCAAGGAGAGCACGGA
JMSF027G01+           CACCAAAAACACGGTTTCCAGTTGTTGTTCTGATTAGACCAACATCAAGGAGAGCACGGA
                      ____________________________________________________________
consensus             CACCAAAAACACGGTTTCCAGTTGTTGTTCTGATTAGACCAACATCAAGGAGAGCACGGA
 
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rJMSF030G04-          AGGGTCTTCTGCTCTCACCTGGCTCAACAGAAAAGTCCTCACCGGTAGCCTCCACATTGC
rJMSF027G01-          AGGGTCTTCTGCTCTCACCTGGCTCAACAGAAAAGTCCTCACCGGTAGCCTCCACATTGC
JMSF027G01+           AGGGTCTTCTGCTCTCACCTGGCTCAACAGAAAAGTCCTCACCGGTAGCCTCCACATTGC
                      ____________________________________________________________
consensus             AGGGTCTTCTGCTCTCACCTGGCTCAACAGAAAAGTCCTCACCGGTAGCCTCCACATTGC
 
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rJMSF030G04-          CTTCATA                                                     
rJMSF027G01-          CTTCATAATCATCATCCATCTCAAGCGTTTTCAAGACCCGCCGTGCTAAAAGAAGCCCAG
JMSF027G01+           CTTCATAATCATCATCCATCTCAAGCGTTTTCAAGACCCGCCGTGCTAAAAGAAGCCCAG
                      ____________________________________________________________
consensus             CTTCATAATCATCATCCATCTCAAGCGTTTTCAAGACCCGCCGTGCTAAAAGAAGCCCAG
 
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rJMSF027G01-          TGCAGTAGGCTGCTGCATAATTCGTCAG                                
JMSF027G01+           TGCAGTAGGCTGCTGCATAATTCGTCAGACCTACTTCAAGCCCATATCGAGGCAATTCAT
                      ____________________________________________________________
consensus             TGCAGTAGGCTGCTGCATAATTCGTCAGACCTACTTCAAGCCCATATCGAGGCAATTCAT
 
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JMSF027G01+           GAGAGTATGCTGCAGCAAGGATGATATCACCAGCAATGCTGGCAGACACTATTTGTGCAA
                      ____________________________________________________________
consensus             GAGAGTATGCTGCAGCAAGGATGATATCACCAGCAATGCTGGCAGACACTATTTGTGCAA
 
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JMSF027G01+           CAATATCTTTGTTGGTAAATCGCACAACAAAACGATACTTGGGAGTGTTGTACTTGTTCT
                      ____________________________________________________________
consensus             CAATATCTTTGTTGGTAAATCGCACAACAAAACGATACTTGGGAGTGTTGTACTTGTTCT
 
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JMSF027G01+           TATCTTGGTTAATAAGTCGAACACGGGCACGGTAATCAGTCTTCCCATCTCTTCTTCTCT
                      ____________________________________________________________
consensus             TATCTTGGTTAATAAGTCGAACACGGGCACGGTAATCAGTCTTCCCATCTCTTCTTCTCT
 
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JMSF030G04+                                                                    CCA
JMSF027G01+           TGAACTGAACCTGAAACCTCTTGAAGTATGCCCTCGTCTTCTGAAGCTTGACAAAGGCCA
                      ____________________________________________________________
consensus             TGAACTGAACCTGAAACCTCTTGAAGTATGCCCTCGTCTTCTGAAGCTTGACAAAGGCCA
 
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JMSF030G04+           TTGGAGCTGCGAAAGAGAGACCGCTACAATATTAGCTTTCAGAGCTGCGTCTGAACTCTC
JMSF027G01+           TTGGAGCTGCGAAAGAGAGACCGCTACAATATTAGCTTTCAGAGCTGCGTCTGAACTCTC
                      ____________________________________________________________
consensus             TTGGAGCTGCGAAAGAGAGACCGCTACAATATTAGCTTTCAGAGCTGCGTCTGAACTCTC