Contig 006550:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMCP007G02+                                                       TGATGAATCCCAGATA
                      ____________________________________________________________
consensus                                                         TGATGAATCCCAGATA
 
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JMCP007G02+           GAGGTTGCAGAAGAAGGGGTAGCACATGAAGGAATAGTAGACAGGAGGGTAAAACGAAGT
                      ____________________________________________________________
consensus             GAGGTTGCAGAAGAAGGGGTAGCACATGAAGGAATAGTAGACAGGAGGGTAAAACGAAGT
 
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JMCP007G02+           TGATATCAGAGCAGCAATGCCAGCATAGTCGAGCCTTAGCATTATGTACGATAGGCGTTC
                      ____________________________________________________________
consensus             TGATATCAGAGCAGCAATGCCAGCATAGTCGAGCCTTAGCATTATGTACGATAGGCGTTC
 
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JMCP007G02+           TGAATGGCAGGATAGTAAGTGGCATGTGCTGCTCGCTAGCAAGCAAAACATTGCCCCGCC
                      ____________________________________________________________
consensus             TGAATGGCAGGATAGTAAGTGGCATGTGCTGCTCGCTAGCAAGCAAAACATTGCCCCGCC
 
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JMCP007G02+           CAAGAATGCAAAGAATGGCCACCGTGTGATTGGTCTGGTCGTCAATGGCGCTATTATGTT
                      ____________________________________________________________
consensus             CAAGAATGCAAAGAATGGCCACCGTGTGATTGGTCTGGTCGTCAATGGCGCTATTATGTT
 
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JMCP007G02+           CACCAGATCTTCCTTCATGCTACTCAGAACACAAACATTGGTATGGTTGCTGTTAGAAAA
                      ____________________________________________________________
consensus             CACCAGATCTTCCTTCATGCTACTCAGAACACAAACATTGGTATGGTTGCTGTTAGAAAA
 
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JMCP007G02+           ACACTCGGGTAGGCAGTTAGTGAGAAGTTGTACAATATGCCAATTAGAAAGTGATGGAAA
                      ____________________________________________________________
consensus             ACACTCGGGTAGGCAGTTAGTGAGAAGTTGTACAATATGCCAATTAGAAAGTGATGGAAA
 
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JMCP007G02+           TGCAGTCTTCAGTTCTTCCCGAAGCCTGTGCAGATCAGGAATGTGCAGCAGGGATGGTAG
JMSF026P13+                                           GATCAGGAATGTGCAGCAGGGATGGTAG
                      ____________________________________________________________
consensus             TGCAGTCTTCAGTTCTTCCCGAAGCCTGTGCAGATCAGGAATGTGCAGCAGGGATGGTAG
 
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JMCP007G02+           ACAAGCGTGCAGATCAGCTTTTCTAAGCACATCAGGAAGATTTTGTAAAGTTGGAAAGTC
JMSF026P13+           ACAAGCGTGCAGATCAGCTTTTCTAAGCACATCAGGAAGATTTTGTAAAGTTGGAAAGTC
                      ____________________________________________________________
consensus             ACAAGCGTGCAGATCAGCTTTTCTAAGCACATCAGGAAGATTTTGTAAAGTTGGAAAGTC
 
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JMCP007G02+           TACAACATCTGGAATCTTCATTGCAGTATATATAGTCAATGAAAGGAAGAGAAAGAACCC
JMSF026P13+           TACAACATCTGGAATCTTCATTGCAGTATATATAGTCAATGAAAGGAAGAGAAAGAACCC
                      ____________________________________________________________
consensus             TACAACATCTGGAATCTTCATTGCAGTATATATAGTCAATGAAAGGAAGAGAAAGAACCC
 
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JMCP007G02+           CACCAAATGCGTCCAAACATTGAGGGTCTCATTGTGAATGGTGAAGACGCTGAGCAAGGC
JMSF026P13+           CACCAAATGCGTCCAAACATTGAGGGTCTCATTGTGAATGGTGAAGACGCTGAGCAAGGC
                      ____________________________________________________________
consensus             CACCAAATGCGTCCAAACATTGAGGGTCTCATTGTGAATGGTGAAGACGCTGAGCAAGGC
 
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JMCP007G02+           CTGCTTCAAG                                                  
JMFS165C07+                                    TAATGGCCAAGAATAAACTCGTTGTCCTTCAAATA
JMSF026P13+           CTGCTTCAAGGGCCACTCGGAGCGGTAATGGCCAAGAATAAACTCGTTGTCCTTCAAATA
                      ____________________________________________________________
consensus             CTGCTTCAAGGGCCACTCGGAGCGGTAATGGCCAAGAATAAACTCGTTGTCCTTCAAATA
 
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JMFS165C07+           TCCAGGCAACGAATGATACTCCACCAACTGATACTTCACCTTCTTCCACAACCTCTTCCC
JMSF026P13+           TCCAGGCAACGAATGATACTCCACCAACTGATACTTCACCTTCTTCCACAACCTCTTCCC
                      ____________________________________________________________
consensus             TCCAGGCAACGAATGATACTCCACCAACTGATACTTCACCTTCTTCCACAACCTCTTCCC
 
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JMFS165C07+           TTTTCCTCCCCGCGAATCACGCCCGTATTTGCCGTCATTTGACCNACAATNGCCGCCCAT
JMSF006E07+                         AATCACGCCCGTATTTGCCGTCATTTGACCTACAATCGCCGCCCAT
JMSF026P13+           TTTTCCTCCCCGCGAATCACGCCCGTATTTGCCGTCATTTGACCTACAATCGCCGCCCAT
                      ____________________________________________________________
consensus             TTTTCCTCCCCGCGAATCACGCCCGTATTTGCCGTCATTTGACCTACAATCGCCGCCCAT
 
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JMFS165C07+           CNCNNCAATATTCCCTTGATCCTTCTCCATCCTATCTCCACTGGAAAACAAGAGAGAATG
JMSF006E07+           CACCTCAATATTCCCTTGATCCTTCTCCATCCTATCTCCACTGGAAAACAAGAGAGAATG
JMSF026P13+           CACCTCAATATTCCCTTGATCCTTCTCCATCCTATCTCCACTGGAAAACAAGAGAGAATG
                      ____________________________________________________________
consensus             CACCTCAATATTCCCTTGATCCTTCTCCATCCTATCTCCACTGGAAAACAAGAGAGAATG
 
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JMFS165C07+           GAATGACGTGCGGGAGTCTGCGAGCGCAAGGAAATGGAGGAAATGAGCCAAGAAAGACGG
JMSF006E07+           GAATGACGTGCGGGAGTCTGCGAGCGCAAGGAAATGGAGGAAATGAGCCAAGAAAGACGG
JMSF026P13+           GAATGACGTGCGGGAGTCTGCGAGCGCAAGGAAATGGAGGAAATGAGCCAAGAAAGACGG
                      ____________________________________________________________
consensus             GAATGACGTGCGGGAGTCTGCGAGCGCAAGGAAATGGAGGAAATGAGCCAAGAAAGACGG
 
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JMFS165C07+           GGAAAACAATGACAAAAGATCTAATCAATCATCCCTCATTTAGTCATAGAGATTGTATGA
JMSF006E07+           GGAAAACAATGACAAAAGATCTAATCAATCATCCCTCATTTAGTCATAGAGATTGTATGA
JMSF026P13+           GGAAAACAATGACAAAAGATCTAATCAATCATCCCTCATTTAGTCATAGAGATTGTATGA
                      ____________________________________________________________
consensus             GGAAAACAATGACAAAAGATCTAATCAATCATCCCTCATTTAGTCATAGAGATTGTATGA
 
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JMFS165C07+           TCTTACAAACCGATTTATTGCTTCTAAATTTCTAATTGAGGGTTATGGGATTGACACGAT
JMSF006E07+           TCTTACAAACCGATTTATTGCTTCTAAATTTCTAATTGAGGGTTATGGGATTGACACGAT
JMSF026P13+           TCTTACAAACCGATTTATTGCTTCTAAATTTCTAATTGAGGGTTATGGGATTGACACGAT
                      ____________________________________________________________
consensus             TCTTACAAACCGATTTATTGCTTCTAAATTTCTAATTGAGGGTTATGGGATTGACACGAT
 
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JMFS165C07+           TCCTGAATTTACAGAATTACAGGA                                    
JMSF006E07+           TCCTGAATTTACAGAATTACAGGAGAAGACATAGAAAATCATTTTAGAGACAACGCTATC
JMSF026P13+           TCCTGAATTTACAGAATTACAGGAGAAGACATAGAAAATCATTTTAGAGACAACGCTATC
                      ____________________________________________________________
consensus             TCCTGAATTTACAGAATTACAGGAGAAGACATAGAAAATCATTTTAGAGACAACGCTATC