Contig 006547:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF026I11Sequence627006547 (2)emb|CDO98011.1|2e-103unnamed protein product [Coffea canephora]730006547 (2)emb|CDO98011.1|5e-98unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF026I11-                                            TTCTGTTTTTTGGTTAATATTCTTAC
                      ____________________________________________________________
consensus                                               TTCTGTTTTTTGGTTAATATTCTTAC
 
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rJMSF026I11-          AACCATACATGTTTATTTGGCACATTACAAATAACAACAGTAGTGTTTTCCAGAAGATAC
                      ____________________________________________________________
consensus             AACCATACATGTTTATTTGGCACATTACAAATAACAACAGTAGTGTTTTCCAGAAGATAC
 
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rJMSF026I11-          TTCAAAACATTTTATTTCTCTTTTACAAAACACAAGAGTATTAACAACTGGTGTAGCAGG
                      ____________________________________________________________
consensus             TTCAAAACATTTTATTTCTCTTTTACAAAACACAAGAGTATTAACAACTGGTGTAGCAGG
 
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rJMSF026I11-          AGAGACACTTCCAGCACCAATACTTCTTAGTGTCCGGATTCGCACCATTCCTCAAGTGTG
JMSF026I11+                                            CCGGATTCGCACCATTCCTCAAGTGTG
                      ____________________________________________________________
consensus             AGAGACACTTCCAGCACCAATACTTCTTAGTGTCCGGATTCGCACCATTCCTCAAGTGTG
 
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rJMSF026I11-          GGCGTCATCACTCCAATATTTTTCATGTCAAATATGTTTGAAGTGTGAATTTCTGGTGTT
JMSF026I11+           GGCGTCATCACTCCAATATTTTTCATGTCAAATATGTTTGAAGTGTGAATTTCTGGTGTT
                      ____________________________________________________________
consensus             GGCGTCATCACTCCAATATTTTTCATGTCAAATATGTTTGAAGTGTGAATTTCTGGTGTT
 
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rJMSF026I11-          GCAGCAGCCGTTGCATCAACAATAACAGTTACGGGCTGATAGTTCCATGCAACTGCATCA
JMSF026I11+           GCAGCAGCCGTTGCATCAACAATAACAGTTACGGGCTGATAGTTCCATGCAACTGCATCA
                      ____________________________________________________________
consensus             GCAGCAGCCGTTGCATCAACAATAACAGTTACGGGCTGATAGTTCCATGCAACTGCATCA
 
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rJMSF026I11-          AAAACCGTCTGCCTAATGCAATTTGGCGTTTGAACACCGGTGATGACTAAGCTGGTAATC
JMSF026I11+           AAAACCGTCTGCCTAATGCAATTTGGCGTTTGAACACCGGTGATGACTAAGCTGGTAATC
                      ____________________________________________________________
consensus             AAAACCGTCTGCCTAATGCAATTTGGCGTTTGAACACCGGTGATGACTAAGCTGGTAATC
 
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rJMSF026I11-          CCATTGCTTTGAAGATATGAATGCAGGTTTGTGTTAAAGAAGGCACTGAAACGCGTCTTC
JMSF026I11+           CCATTGCTTTGAAGATATGAATGCAGGTTTGTGTTAAAGAAGGCACTGAAACGCGTCTTC
                      ____________________________________________________________
consensus             CCATTGCTTTGAAGATATGAATGCAGGTTTGTGTTAAAGAAGGCACTGAAACGCGTCTTC
 
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rJMSF026I11-          ACCAATCTGTAATCCCCTTCCTTGATAACAAGCCCATCAACTAGTTCAGCACCCACACTC
JMSF026I11+           ACCAATCTGTAATCCCCTTCCTTGATAACAAGCCCATCAACTAGTTCAGCACCCACACTC
                      ____________________________________________________________
consensus             ACCAATCTGTAATCCCCTTCCTTGATAACAAGCCCATCAACTAGTTCAGCACCCACACTC
 
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rJMSF026I11-          CCCTTAGAAGTCGGTTTTGGCTTCCCGGGGGAATACAAATGCCTTCGAAACAACTCAGCA
JMSF026I11+           CCCTTAGAAGTCGGTTTTGGCTTCCCGGGGGAATACAAATGCCTTCGAAACAACTCAGCA
                      ____________________________________________________________
consensus             CCCTTAGAAGTCGGTTTTGGCTTCCCGGGGGAATACAAATGCCTTCGAAACAACTCAGCA
 
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rJMSF026I11-          TCTCTTCCCGATGGATCATGCTCACGGACGACCCAAATAATGGGGATGCCACGGTTTCTT
JMSF026I11+           TCTCTTCCCGATGGATCATGCTCACGGACGACCCAAATAATGGGGATGCCACGGTTTCTT
                      ____________________________________________________________
consensus             TCTCTTCCCGATGGATCATGCTCACGGACGACCCAAATAATGGGGATGCCACGGTTTCTT
 
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rJMSF026I11-          GCAACCTCAACGGCCTTAATAACGTTGGGGACGATAGCTTGGGCACCCCCAACGTGCATA
JMSF026I11+           GCAACCTCAACGGCCTTAATAACGTTGGGGACGATAGCTTGGGCACCCCCAACGTGCATA
                      ____________________________________________________________
consensus             GCAACCTCAACGGCCTTAATAACGTTGGGGACGATAGCTTGGGCACCCCCAACGTGCATA
 
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rJMSF026I11-          GGGCCACCTGGTAATATGAAATCATTCTGCATATCTATGATGAG                
JMSF026I11+           GGGCCACCTGGTAATATGAAATCATTCTGCATATCTATGATGAGAAGAGCAGTGTTCCTC
                      ____________________________________________________________
consensus             GGGCCACCTGGTAATATGAAATCATTCTGCATATCTATGATGAGAAGAGCAGTGTTCCTC
 
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JMSF026I11+           CATTTCCCGGAGGCCATTGAAGTAAAAGGGGCAGCTCAGGAGAGCTATAAGCTATTCTCC
                      ____________________________________________________________
consensus             CATTTCCCGGAGGCCATTGAAGTAAAAGGGGCAGCTCAGGAGAGCTATAAGCTATTCTCC