Contig 006545:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF021C15+                                                   TCTCTATGTAATTGATAACA
                      ____________________________________________________________
consensus                                                     TCTCTATGTAATTGATAACA
 
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JMSF021C15+           TAAATAATTAAGCACACTTTAGTGTCTTCCAAGACAAACTCATGTAACTGCTCTATAAAT
JMSF034E14+                                          AGACAAACCCATGTAACTGCTCTATAAAT
JMSF025M17+                                          AGACAAACCCANGTAACTGCTCTATAAAT
                      ____________________________________________________________
consensus             TAAATAATTAAGCACACTTTAGTGTCTTCCAAGACAAACCCATGTAACTGCTCTATAAAT
 
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JMSF021C15+           ACCAAACCATGGACAACAATATTTGATTTACAACAGTTGCCTGAATATAATAAACTCAAA
JMSF034E14+           ACCAAACCATGGACAACAATATTTGATTTACAACAGTTGCCTGAATATAATAAACTCAAA
JMSF025M17+           ACCAAACCATGGACAACAATATTTGATTTACAACAGTTGCCTGAATACAATAAACTCAAA
                      ____________________________________________________________
consensus             ACCAAACCATGGACAACAATATTTGATTTACAACAGTTGCCTGAATATAATAAACTCAAA
 
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JMSF021C15+           TCATAAAAAACACAGTAGGTAAAGCATTGCTATTGCAGACCATGAAGAAGATTACATCTT
JMSF034E14+           TCATAAAAAACACAGTAGGTAAAGCATTGCTATTGCAGACCATGAAGAAGATTACATCTT
JMSF025M17+           TCATAAAAAACACAGTAGGTAAAGCATTGCTATTGCAGACCATGAAGAAGATTACATCTT
                      ____________________________________________________________
consensus             TCATAAAAAACACAGTAGGTAAAGCATTGCTATTGCAGACCATGAAGAAGATTACATCTT
 
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JMSF021C15+           CATGCGCGATTGGATCCAAGAGGAAACATTGTCGTCCAACAAAAGGTATTTCTTCAAGAA
JMSF034E14+           CATGCACGATTGGATCCAAGAGGAAACATTGTCGTCCAACAAAAGGTATTTCTTCAAGAA
JMSF025M17+           CATGCACGATTGGATCCAAGAGGAAACATTGTCGTCCAACAAAATGTATTTCTTCAAGAA
                      ____________________________________________________________
consensus             CATGCACGATTGGATCCAAGAGGAAACATTGTCGTCCAACAAAAGGTATTTCTTCAAGAA
 
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JMSF021C15+           ATTCATTAAATACACTATCAAAGCATGTAATCAATCATCTACTGCAATCATCTAATCATG
JMSF034E14+           ATTCATTAAATACACTATCAAAGCATGTAATCAATCATCTACTGCAATCATCTAATCATG
JMSF025M17+           ATTCATTAAATACACTATCAAAGCATGTAATCAATCATCTACTGCAATCATCTAATCATG
                      ____________________________________________________________
consensus             ATTCATTAAATACACTATCAAAGCATGTAATCAATCATCTACTGCAATCATCTAATCATG
 
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JMSF021C15+           TCATGATGCATCTAATATTACATATTCAACTGTTAGAATAGGAAAACTTAGCTTTCTTCG
JMSF034E14+           TAATGATGCATCTAATATTACATATTCAACTGTTAGAATAGGAAAACTTAGCTTTCTTCG
JMSF025M17+           TAATGATGCATCTAATATTACATATTCAACTGTTAGAATAGGAAAACTTAGCTTTCTTCG
                      ____________________________________________________________
consensus             TAATGATGCATCTAATATTACATATTCAACTGTTAGAATAGGAAAACTTAGCTTTCTTCG
 
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JMSF021C15+           AAACTGTATCCAAAACTGTGAAACCCTCCTGTCAAGGTCTAAGAATAGCAGAAGAT    
JMSF034E14+           AAACTGTATCCAAAACTGTGAAACCCTCCTGTCAAGGTCTAAGAATAGCAGAAG---ATA
JMSF025M17+           AAACTGTATCCAAAACTGTGAAACCCTCCTGTCAAGGTCTAAGAATAGCAGAAGATCATA
                      ____________________________________________________________
consensus             AAACTGTATCCAAAACTGTGAAACCCTCCTGTCAAGGTCTAAGAATAGCAGAAGATCATA
 
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JMSF034E14+           TAAATCTGAAAACTATGGGAAATCCGAAGCTATTGTAGCTAAAAGCGACGATTTCCACGA
JMSF025M17+           TAAATCTGAAAACTATGGGAAATCCGAAGCTATTGTAGCTAAAAGCGGCGATTTCCACGA
                      ____________________________________________________________
consensus             TAAATCTGAAAACTATGGGAAATCCGAAGCTATTGTAGCTAAAAGCGGCGATTTCCACGA
 
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JMSF034E14+           ATTCAATTCTTACACTCAGATTCCCACATTCCAGCCGCAGCTGTAAGCTTTCTATCGCGA
JMSF025M17+           ATTCAATTCTTACACTCAAATTCCCACATTCCAGCCGCAGCTGTAAGCTTTCTATCGCGA
                      ____________________________________________________________
consensus             ATTCAATTCTTACACTCAGATTCCCACATTCCAGCCGCAGCTGTAAGCTTTCTATCGCGA
 
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JMSF034E14+           CACAGCGGCAGGGTTTCTTCATCGTGAATATGTTAGAGAGATAGAAATTGCGTGAAAATG
JMSF025M17+           CACAGCGGCAGGGTTTCTTCATCGTGAATATGTTAGAGAGATAGAAATTGCGTGAAAATG
                      ____________________________________________________________
consensus             CACAGCGGCAGGGTTTCTTCATCGTGAATATGTTAGAGAGATAGAAATTGCGTGAAAATG
 
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JMSF034E14+           GCGAACGGTGGCATAGATCACACCCTCTAATTTTGTAGGAGATAAGGCCAACACATGAAT
JMSF025M17+           GCGAACGGTGGCATAGATCACACCCTCTAATTTTGTAGGAGATAAGGTCAACACATGAAT
                      ____________________________________________________________
consensus             GCGAACGGTGGCATAGATCACACCCTCTAATTTTGTAGGAGATAAGGTCAACACATGAAT
 
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JMSF034E14+           TGTGCTAAACCAAGGCTTCCCGGTGTGTATGTATCGTACAATAGAAATGGAAAGCT    
JMSF025M17+           TGTGCTAAACCAAGGCTTCCCGGTGTGTATGTATCGTACAATAGAAATGGAAAGCTAACC
                      ____________________________________________________________
consensus             TGTGCTAAACCAAGGCTTCCCGGTGTGTATGTATCGTACAATAGAAATGGAAAGCTAACC