Contig 006542:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF016H22+                 AAAACAATTTAGTACGATAAAAACTAGAATGAAACTATTTTTATGNAGAAAGTG
                      ____________________________________________________________
consensus                   AAAACAATTTAGTACGATAAAAACTAGAATGAAACTATTTTTATGNAGAAAGTG
 
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JMSF016H22+           NGTATATATNGACAAACCGTATCGGAGTTGAAAATGTCATCAACAAAANTGNGAATAGAA
JMSF025G10+                            CGTATCGGAGTNGAAAATGTCATCAACAAAATTGAGAATAGAA
                      ____________________________________________________________
consensus             NGTATATATNGACAAACCGTATCGGAGTTGAAAATGTCATCAACAAAATTGAGAATAGAA
 
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JMSF016H22+           CTTGTATCGACATCCATTATTTCACCTCTGGGNTCATGTGTAGCCTTAACATGTTCCATG
JMSF025G10+           CTTGTATCGACATCCATTATTTCACCTCTGGGATCATGTGTAGCCTTAACATGTTCCATG
                      ____________________________________________________________
consensus             CTTGTATCGACATCCATTATTTCACCTCTGGGATCATGTGTAGCCTTAACATGTTCCATG
 
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JMSF016H22+           ATAATCGCGTCCTCAGTATCAATGGCATGGTTNTGTGAAACCATTGNCGTTGATAGAGAT
JMSF025G10+           ATAATCGCGTCCTCAGTATCAATGGCATGGTTTTGTGAAACCATTGTCGTTGATAGAGAT
                      ____________________________________________________________
consensus             ATAATCGCGTCCTCAGTATCAATGGCATGGTTTTGTGAAACCATTGTCGTTGATAGAGAT
 
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JMSF016H22+           AGAACTNGGTTCGACATGTGTAATAGATATGAAGAAGAGAATATTAATTCCTTGCTTGGA
JMSF025G10+           AGAACTTGGTTTGACATGTGTAATAGATATGAAGAAGAGAATATTAATTCCTTGCTTGGA
                      ____________________________________________________________
consensus             AGAACTTGGTTTGACATGTGTAATAGATATGAAGAAGAGAATATTAATTCCTTGCTTGGA
 
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JMSF016H22+           TNGCTNTTGANTATAATAATCNTGAATTTTGTT                           
JMSF025G10+           TTGCTTTTGATTATAATAATCTTGAATTTTGTTTTCAAGGATTGTGTTCATTTAGGTCTT
                      ____________________________________________________________
consensus             TTGCTTTTGATTATAATAATCTTGAATTTTGTTTTCAAGGATTGTGTTCATTTAGGTCTT
 
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JMSF025G10+           GTATATATAGTATATGAATTGATGATCTCTTGTAGAAGAGCTAACTTCAATACCTAGCTT
                      ____________________________________________________________
consensus             GTATATATAGTATATGAATTGATGATCTCTTGTAGAAGAGCTAACTTCAATACCTAGCTT
 
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JMSF025G10+           CGAGATAAGGTAATCATCAAGAGAATCAAAATGAAAAACGTACTCTTCAAGTATCTTAAT
                      ____________________________________________________________
consensus             CGAGATAAGGTAATCATCAAGAGAATCAAAATGAAAAACGTACTCTTCAAGTATCTTAAT
 
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JMSF025G10+           GCTTTAAAAAAGAAGAAAAGAAAAAGGTTTCTACGTACGTACGTAGATGATATGTGCTGC
                      ____________________________________________________________
consensus             GCTTTAAAAAAGAAGAAAAGAAAAAGGTTTCTACGTACGTACGTAGATGATATGTGCTGC
 
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JMSF025G10+           CAGGAATAACTATGGTATATTGCATAAAGATATATACTGATGATTATTGCCAATGACCTT
                      ____________________________________________________________
consensus             CAGGAATAACTATGGTATATTGCATAAAGATATATACTGATGATTATTGCCAATGACCTT
 
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JMSF025G10+           GTGGTCTAATTAAGTCACTGCTGGAAATTATAGAATTTCCGACCACGTGGAAGTGATCTT
                      ____________________________________________________________
consensus             GTGGTCTAATTAAGTCACTGCTGGAAATTATAGAATTTCCGACCACGTGGAAGTGATCTT
 
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JMSF025G10+           AAATCAAGTCGAAAGCAAAAAGTGGTCGGAAATCGCAATAAAGGTTTTTCCGAATACCAA
                      ____________________________________________________________
consensus             AAATCAAGTCGAAAGCAAAAAGTGGTCGGAAATCGCAATAAAGGTTTTTCCGAATACCAA