| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012B18 | Sequence | 531 | 006538 (7) | ref|XP_011031957.1| | 8e-89 | PREDICTED: GTP-binding protein YPTM2 [Populus euphratica] | 762 | 006538 (7) | ref|XP_003552490.1| | 2e-120 | PREDICTED: ras-related protein RABD2a [Glycine max] |
| JMSF004D18 | Sequence | 365 | 002067 (3) | ref|XP_004245078.1| | 1e-10 | PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 [Solan | 446 | 006538 (7) | ref|XP_003552490.1| | 7e-51 | PREDICTED: ras-related protein RABD2a [Glycine max] |
| JMSF004F20 | Sequence | 437 | 006538 (7) | gb|EYU19463.1| | 5e-69 | hypothetical protein MIMGU_mgv1a012444mg [Erythranthe guttata] | |||||
| JMSF024P21 | Sequence | 629 | 006538 (7) | gb|ACU17433.1| | 6e-114 | unknown [Glycine max] | 726 | 006538 (7) | ref|XP_003552490.1| | 1e-122 | PREDICTED: ras-related protein RABD2a [Glycine max] |
| JMSF049E23 | Sequence | 672 | 006538 (7) | ref|XP_007139647.1| | 3e-123 | hypothetical protein PHAVU_008G047400g, partial [Phaseolus vulgaris] gb|ESW11641 | 726 | 020531 | ref|XP_003552490.1| | 1e-114 | PREDICTED: ras-related protein RABD2a [Glycine max] |
This contig is upended
. : . : . : . : . : . :
rJMSF004D18- ATCATTCCATTATCACATGAAGAAAAAAGAAAGAAAACA
rJMFF012B18- ATTTCACCAGTTTTTACAATCATTCCATTATCACATGAAGAAAAAAGAAAGAAAACA
rJMSF024P21- ATCATTCCATTATCACATGAAGAAAAAAGAAAGAAAACA
____________________________________________________________
consensus ATTTCACCAGTTTTTACAATCATTCCATTATCACATGAAGAAAAAAGAAAGAAAACA
. : . : . : . : . : . :
rJMSF004D18- TTGGAGTGACAAAGATATTGAAGAATTAATGAATCCATGAAGTGGACAGCTATAGATTTA
rJMFF012B18- TTGGAGTGACAAAGATATTGAAGAATTAATGAATCCATGAAGTGGACAGCTATAGATTTA
rJMSF024P21- TTGGAGTGACAAAGATATTGAAGAATTAATGAATCCATGAAGTGGACAGCTATAGATTTA
____________________________________________________________
consensus TTGGAGTGACAAAGATATTGAAGAATTAATGAATCCATGAAGTGGACAGCTATAGATTTA
. : . : . : . : . : . :
rJMSF004D18- GCCATAACACATACAAATAAACTGAGCAACTGTCTACCCCTCAGGAAGAGCAGCAGCCAC
rJMFF012B18- GCCATAACACATACAAATAAACTGAGCAACTGTCTACCCCTCAGGAAGAGCAGCAGCCAC
rJMSF024P21- GCCATAACACATACAAATAAACTGAGCAACTGTCTACCCCTCAGGAAGAGCAGCAGCCAC
____________________________________________________________
consensus GCCATAACACATACAAATAAACTGAGCAACTGTCTACCCCTCAGGAAGAGCAGCAGCCAC
. : . : . : . : . : . :
rJMSF004D18- TACTATTCTGTGCAACTGGCTGTCCTTTAATATTAACAGTTGGAGGCTTCATTGCATTAG
rJMFF012B18- TACTATTCTGTGCAACTGGCTGTCCTTTAATATTAACAGTTGGAGGCTTCATTGCATTAG
rJMSF024P21- TACTATTCTGTGCAACTGGCTGTCCTTTAATATTAACAGTTGGAGGCTTCATTGCATTAG
JMSF049E23+ GGCTTCATTGCATTAG
____________________________________________________________
consensus TACTATTCTGTGCAACTGGCTGTCCTTTAATATTAACAGTTGGAGGCTTCATTGCATTAG
. : . : . : . : . : . :
rJMSF004D18- CTGGTTGGCTTGCCATCTTATTCTTTATTGAAGCAGACATAGCCATGAAAGCTTGCTCTA
rJMFF012B18- CTGGTTGGCTTGCCATCTTATTCTTTATTGAAGCAGACATAGCCATGAAAGCTTGCTCTA
rJMSF024P21- CTGGTTGGCTTGCCATCTTATTCTTTATTGAAGCAGACATAGCCATGAAAGCTTGCTCTA
JMSF049E23+ CTGGTTGGCTTGCCATCTTATTCTTTATTGAAGCAGACATAGCCATGAAAGCTTGCTCTA
JMSF024P21+ AGCAGACATAGCCATGAAAGCTTGCTCTA
____________________________________________________________
consensus CTGGTTGGCTTGCCATCTTATTCTTTATTGAAGCAGACATAGCCATGAAAGCTTGCTCTA
. : . : . : . : . : . :
rJMSF004D18- CATTAGTAGCATCTTTTGCACTGGTTTCCATGAATGGAATGCCTATTTCATCAGCAAATG
rJMFF012B18- CATTAGTAGCATCTTTTGCACTGGTTTCCATGAATGGAATGCCTATTTCATCAGCAAATG
rJMSF024P21- CATTAGTAGCATCTTTTGCACTGGTTTCCATGAATGGAATGCCTATTTCATCAGCAAATG
JMSF049E23+ CATTAGTAGCATCTTTTGCACTGGTTTCCATGAATGGAATGCCTATTTCATCAGCAAATG
JMSF024P21+ CATTAGTAGCATCTTTTGCACTGGTTTCCATGAATGGAATGCCTATTTCATCAGCAAATG
____________________________________________________________
consensus CATTAGTAGCATCTTTTGCACTGGTTTCCATGAATGGAATGCCTATTTCATCAGCAAATG
. : . : . : . : . : . :
rJMSF004D18- CCTTAGCTGTTTCATACGAGACAGCTCTGTTTGCTGCAAGATCACATTTGTTCCCAACAA
rJMFF012B18- CCTTAGCTGTTTCATACGAGACAGCTCTGTTTGCTGCAAGATCACATTTGTTCCCAACAA
rJMSF024P21- CCTTAGCTGTTTCATACGAGACAGCTCTGTTTGCTGCAAGATCACATTTGTTCCCAACAA
JMSF049E23+ CCTTAGCTGTTTCATACGAGACAGCTCTGTTTGCTGCAAGATCACATTTGTTCCCAACAA
JMFF012B18+ GTTTCATACGAGACAGCTCTGTTTGCTGCAAGATCACATTTGTTCCCAACAA
JMSF024P21+ CCTTAGCTGTTTCATACGAGACAGCTCTGTTTGCTGCAAGATCACATTTGTTCCCAACAA
____________________________________________________________
consensus CCTTAGCTGTTTCATACGAGACAGCTCTGTTTGCTGCAAGATCACATTTGTTCCCAACAA
. : . : . : . : . : . :
rJMSF004D18- GAAGTTTGTTGACATTTTCACTAGCATATCTATCGATTTCACTAA
rJMFF012B18- GAAGTTTGTTGACATTTTCACTAGCATATCTATCGATTTCACTAAGCCATTGCTTGACAT
rJMSF024P21- GAAGTTTGTTGACATTTTCACTAGCATATCTATCGATTTCACTAAGCCATTGCTTGACAT
JMSF049E23+ GAAGTTTGTTGACATTTTCACTAGCATATCTATCGATTTCACTAAGCCATTGCTTGACAT
JMFF012B18+ GAAGTTTGTTGACATTTTCACTAGCATATCTATCGATTTCACTAAGCCATTGCTTGACAT
JMSF004F20+ AAGCCATTGCTTGACAT
JMSF024P21+ GAAGTTTGTTGACATTTTCACTAGCATATCTATCGATTTCACTAAGCCATTGCTTGACAT
____________________________________________________________
consensus GAAGTTTGTTGACATTTTCACTAGCATATCTATCGATTTCACTAAGCCATTGCTTGACAT
. : . : . : . : . : . :
rJMFF012B18- TGTTGAAGCTCTCAAGGTCCGTCACATCATATACAACTATTATGCCGTGGGCTCCACGAT
rJMSF024P21- TGTTGAAGCTCTCAAGGTCCGTCACATCATATACAACTATTATGCCGTGGGCTCCACGAT
JMSF049E23+ TGTTGAAGCTCTCAAGGTCCGTCACATCATATACAACTATTATGCCGTGGGCTCCACGAT
JMFF012B18+ TGTTGAAGCTCTCAAGGTCCGTCACATCATATACAACTATTATGCCGTGGGCTCCACGAT
JMSF004F20+ TGTTGAAGCTCTCAAGGTCCGTCACATCATATACAACTATTATGCCGTGGGCTCCACGAT
JMSF024P21+ TGTTGAAGCTCTCAAGGTCCGTCACATCATATACAACTATTATGCCGTGGGCTCCACGAT
____________________________________________________________
consensus TGTTGAAGCTCTCAAGGTCCGTCACATCATATACAACTATTATGCCGTGGGCTCCACGAT
. : . : . : . : . : . :
rJMFF012B18- AGTAGCTGCTAGTAATAGTCCTAAACCGTTCTTGTCCAGCAGTATCCCAAATTTGAAGTT
rJMSF024P21- AGTAGCTGCTAGTAATAGTCCTAAACCGTTCTTGTCCAGCAGTATCCCAAATTTGAAGTT
JMSF049E23+ AGTAGCTGCTAGTAATAGTCCTAAACCGTTCTTGTCCAGCAGTATCCCAAATTTGAAGTT
JMFF012B18+ AGTAGCTGCTAGTAATAGTCCTAAACCGTTCTTGTCCAGCAGTATCCCAAATTTGAAGTT
JMSF004F20+ AGTAGCTGCTAGTAATAGTCCTAAACCGTTCTTGTCCAGCAGTATCCCAAATTTGAAGTT
JMSF024P21+ AGTAGCTGCTAGTAATAGTCCTAAACCGTTCTTGTCCAGCAGTATCCCAAATTTGAAGTT
____________________________________________________________
consensus AGTAGCTGCTAGTAATAGTCCTAAACCGTTCTTGTCCAGCAGTATCCCAAATTTGAAGTT
. : . : . : . : . : . :
rJMFF012B18- TTAGTGTTTTCCCATCTTGCTCCACAGTGCGAATTTTAAAGTCAACTCCGATGGTGCTGA
rJMSF024P21- TTAGTGTTTTCCCATCTTGCTCCACAGTGCGAATTTTAAAGTCAACTCCGATGGTGCTGA
JMSF049E23+ TTAGTGTTTTCCCATCTTGCTCCACAGTGCGAATTTTAAAGTCAACTCCGATGGTGCTGA
JMFF012B18+ TTAGTGTTTTCCCATCTTGCTCCACAGTGCGAATTTTAAAGTCAACTCCGATGGTGCTGA
JMSF004F20+ TTAGTGTTTTCCCATCTTGCTCCACAGTGCGAATTTTAAAGTCAACTCCGATGGTGCTGA
JMSF024P21+ TTAGTGTTTTCCCATCTTGCTCCACAGTGCGAATTTTAAAGTCAACTCCGATGGTGCTGA
____________________________________________________________
consensus TTAGTGTTTTCCCATCTTGCTCCACAGTGCGAATTTTAAAGTCAACTCCGATGGTGCTGA
. : . : . : . : . : . :
rJMFF012B18- TATAACTCTCCAAGTATGTATCATCAGCAAATCTCAATAGAANGCATGATTTCCCAACAC
rJMSF024P21- TATAACTCTCCAAGTATGTATCATCAGCAAATCTCAATAGAAGGCATGATTTCCCAACAC
JMSF049E23+ TATAACTCTCCAAGTATGTATCATCAGCAAATCTCAATAGAAGGCATGATTTCCCAACAC
JMFF012B18+ TATAACTCTCCAAGTATGTATCATCAGCAAATCTCAATAGAAGGCATGATTTCCCAACAC
JMSF004F20+ TATAACTCTCCAAGTATGTATCATCAGCAAATCTCAATAGAAGGCATGATTTCCCAACAC
JMSF024P21+ TATAACTCTCCAAGTATGTATCATCAGCAAATCTCAATAGAAGGCATGATTTCCCAACAC
____________________________________________________________
consensus TATAACTCTCCAAGTATGTATCATCAGCAAATCTCAATAGAAGGCATGATTTCCCAACAC
. : . : . : . : . : . :
rJMFF012B18- CAGAATCTCCNATTAGCAAAA
rJMSF024P21- CAGAATCTCCAATTAGCAAANGTTTGA
JMSF049E23+ CAGAATCTCCAATTAGCAAAAGTTTGAACAAATAGTCATACTCAGGATTCATGGCGACAG
JMFF012B18+ CAGAATCTCCAATTAGCAAAAGTTTGAACAAATAGTCATACTCAGGATTCATGGCGACAG
JMSF004F20+ CAGAATCTCCAATTAGCAAAAGTTTGAACAAATAGTCATACTCAGGATTCATGGCGACAG
JMSF024P21+ CAGAATCTCCAATTAGCAAAAGTTTGAACAAATAGTCATACTCAGGATTCATGGCGACAG
____________________________________________________________
consensus CAGAATCTCCAATTAGCAAAAGTTTGAACAAATAGTCATACTCAGGATTCATGGCGACAG
. : . : . : . : . : . :
JMSF049E23+ AGGAGAAAGGTTAACCGGAAACTGAGGGATTCGCCGGCGTTAAGTGACCGACCGGAATCT
JMFF012B18+ AGGAGAAAGGTTAACCGGAAACTGAGGGATTCGCCGGCGTTAAGTGACCGACCGGAATCT
JMSF004F20+ AGGAGAAAGGTTAACCGGAAACTGAGGGATTCGCCGGCGTTAAGTGACCGACCGGAATCT
JMSF024P21+ AGGAGAAAGGTTAACCGGAAACTGAGGGATTCGCCGGCGTTAAGTGACCGACCGGAATCT
____________________________________________________________
consensus AGGAGAAAGGTTAACCGGAAACTGAGGGATTCGCCGGCGTTAAGTGACCGACCGGAATCT
. : . : . : . : . : . :
JMSF049E23+ GAATCTACGTGGGAGAATTTTAGATGCAAAGGAGATGAGGCAGAGAAACGCACAC
JMFF012B18+ GAATCTACGTGGGAGAATTTTAGATGCAAAGGAGATGAGGCAGAGAAACGCACAC
JMSF004F20+ GAATCTACGTGGGAGAATTTTAGATGCAAAGGAGATGAGGCAGAGAAACGCACAC
JMSF024P21+ GAATCTACGTGGGAGAATTTTAGATGCAAAGGAGATGAGGCAGAGAAACGCACACACGTC
____________________________________________________________
consensus GAATCTACGTGGGAGAATTTTAGATGCAAAGGAGATGAGGCAGAGAAACGCACACACGTC