Contig 006534:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF032H23+                               TGATATAAAACCTAAATCTAAACACACTCAGACAGTTCAA
JMSF043I17+                                                        ACTCAGACAGTTCAA
                      ____________________________________________________________
consensus                                 TGATATAAAACCTAAATCTAAACACACTCAGACAGTTCAA
 
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JMSF032H23+           ATATTGACAGTTTCACTTTTACAACACAGAAAAATTGCACTCAGTAATCATGCATTAAAT
JMSF043I17+           ATATTGACAGTTTCACTTTTACAACACAGAAAAATTGCACTCAGTAATCATGCATTAAAT
JMSF037I21+                                                CACTCAGTAATCATGCATTAAAT
JMSF024M21+                                          AAATTGCACTCAGTAATCATGCATTAAAT
                      ____________________________________________________________
consensus             ATATTGACAGTTTCACTTTTACAACACAGAAAAATTGCACTCAGTAATCATGCATTAAAT
 
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JMSF032H23+           ACTCAGTTCTACAATTATAGGTAGCAAAAGGAAGCAGCCAATTAACACTCCAGATAACAT
JMSF043I17+           ACTCAGTTCTACAATTATAGGTAGCAAAAGGAAGCAGCCAATTAACACTCCAGATAACAT
JMSF037I21+           ACTCAGTTCTACAATTATAGGTAGCAAAAGGAAGCAGCCAATTAACACTCCAGATAACAT
JMSF024M21+           ACTCAGTTCTACAATTATAGGTAGCAAAAGGAAGCAGCCAATTAACACTCCAGATAACAT
                      ____________________________________________________________
consensus             ACTCAGTTCTACAATTATAGGTAGCAAAAGGAAGCAGCCAATTAACACTCCAGATAACAT
 
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JMSF032H23+           ACGCACATTAAGATTTTAGTATTTAAGCATTACCTTTGCCAAATGTTGTTGTATGTACAT
JMSF043I17+           ACGCACATTAAGATTTTAGTATTTAAGCATTACCTTTGCCAAATGTTGTTGTATGTACAT
JMSF037I21+           ACGCACATTAAGATTTTAGTATTTAAGCATTACCTTTGCCAAATGTTGTTGTATGTACAT
JMSF024M21+           ACGCACATTAAGATTTTAGTATTTAAGCATTACCTTTGCCAAATGTTGTTGTATGTACAT
                      ____________________________________________________________
consensus             ACGCACATTAAGATTTTAGTATTTAAGCATTACCTTTGCCAAATGTTGTTGTATGTACAT
 
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JMSF032H23+           TGTTGAGACAATTTTTACATCTTTACGCCATTGTTAAACTGTAAACTTAGTGTTATTGTT
JMSF043I17+           TGTTGAGACAATTTTTACATCTTTACGCCATTGTTAAACTGTAAACTTAGTGTTATTGTT
JMSF037I21+           TGTTGAGACAATTTTTACATCTTTACGCCATTGTTAAACTGTAAACTTAGTGTTATTGTT
JMSF024M21+           TGTTGAGACAATTTTTACATCTTTACGCCATTGTTAAACTGTAAACTTAGTGTTATTGTT
                      ____________________________________________________________
consensus             TGTTGAGACAATTTTTACATCTTTACGCCATTGTTAAACTGTAAACTTAGTGTTATTGTT
 
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JMSF032H23+           CACAAAATACCTTGATATTAGGTTTCTCGACACCGTGTAGAATCCACAGATATTAGACTG
JMSF043I17+           CACAAAATACCTTGATATTAGGTTTCTCGACACCGTGTAGAATCCACAGATATTAGACTG
JMSF037I21+           CACAAAATACCTTGATATTAGGTTTCTCGACACCGTGTAGAATCCACAGATATTAGACTG
JMSF024M21+           CACAAAATACCTTGATATTAGGTTTCTCGACACCGTGTAGAATCCACAGATATTAGACTG
                      ____________________________________________________________
consensus             CACAAAATACCTTGATATTAGGTTTCTCGACACCGTGTAGAATCCACAGATATTAGACTG
 
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JMSF032H23+           ACTCATCTCTAACCTCTTACTCTAAAACACCAGAAATGTAACTTTAACAGTAGATCGAAC
JMSF043I17+           ACTCATCTCTAACCTCTTACTCTAAAACACCAGAAATGTAACTTTAACAGTAGATCGAAC
JMSF037I21+           ACTCATCTCTAACCTCTTACTCTAAAACACCAGAAATGTAACTTTAACAGTAGATCGAAC
JMSF024M21+           ACTCATCTCTAACCTCTTACTCTAAAACACCAGAAATGTAACTTTAACAGTAGATCGAAC
                      ____________________________________________________________
consensus             ACTCATCTCTAACCTCTTACTCTAAAACACCAGAAATGTAACTTTAACAGTAGATCGAAC
 
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JMSF032H23+           CTAAATCAGTGAAATCGAACTCATAAAGTGTTTTTTTCCTGGAAATCGGCAACATTGTAG
JMSF043I17+           CTAAATCAGTGAAATCGAACTCATAAAGTGTTTTTTTCCTGGAAATCGGCAACATTGTAG
JMSF037I21+           CTAAATCAGTGAAATCGAACTCATAAAGTGTTTTTTTCCTGGAAATCGGCAACATTGTAG
JMSF024M21+           CTAAATCAGTGAAATCGAACTCATAAAGTGTTTTTTTCCTGGAAATCGGCAACATTGTAG
                      ____________________________________________________________
consensus             CTAAATCAGTGAAATCGAACTCATAAAGTGTTTTTTTCCTGGAAATCGGCAACATTGTAG
 
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JMSF032H23+           GGTGAGGTGTGTGTATAGACGAACAACAGTTACTTCTACANTGAGAGAGAGAGAGTTCGG
JMSF043I17+           GGTGAGGTGTGTGTATAGACGAACAACAGTTACTTCTACATTGAGAGAGAGAGAGTTCGG
JMSF037I21+           GGTGAGGTGTGTGTATAGACGAACAACAGTTACTTCTACATTGAGAGAGAGAGAGTTCGG
JMSF024M21+           GGTGAGGTGTGTGTATAGACGAACAACAGTTACTTCTACATTGAGAGAGAGAGAGTTCGG
                      ____________________________________________________________
consensus             GGTGAGGTGTGTGTATAGACGAACAACAGTTACTTCTACATTGAGAGAGAGAGAGTTCGG
 
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JMSF032H23+           TCAGAATGAAATTCTGCTCGAAATGGAGTTGAAAACCTAAAGAATAGAGCGCCATGAACA
JMSF043I17+           TCAGAATGAAATTCTGCTCGAAATGGAGTTGAAAACCTAAAGAATAGAGCGCCATGAACA
JMSF037I21+           TCAGAATGAAATTCTGCTCGAAATGGAGTTGAAAACCTAAAGAATAGAGCGCCATGAACA
JMSF024M21+           TCAGAATGAAATTCTGCTCGAAATGGAGTTGAAAACCTAAAGAATAGAGCGCCATGAACA
                      ____________________________________________________________
consensus             TCAGAATGAAATTCTGCTCGAAATGGAGTTGAAAACCTAAAGAATAGAGCGCCATGAACA
 
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JMSF032H23+           AGATCGGAGTGATTCTACGCGATCTTAGTGAGTGTTAGAGACAGAGAGAGCTAAGGGATT
JMSF043I17+           AGATCGGAGTGATTCTACGCGATCTTAGTGAGTGTTAGAGACAGAGAGAGCTAAGGGATT
JMSF037I21+           AGATCGGAGTGATTCTACGCGATCTTAGTGAGTGTTAGAGACAGAGAGAGCTAAGGGATT
JMSF024M21+           AGATCGGAGTGATTCTACGCGATCTTAGTGAGTGTTAGAGACAGAGAGAGCTAAGGGATT
                      ____________________________________________________________
consensus             AGATCGGAGTGATTCTACGCGATCTTAGTGAGTGTTAGAGACAGAGAGAGCTAAGGGATT
 
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JMSF032H23+           GACAACGCGATCGGATTGAGTGTTAGAGAGAGAGAGCTAAGGGATTGGTGTTGTTC    
JMSF043I17+           GACAACGCGATCGGATTGAGTGTTAGAGAGAGAGAACTAAGGGATTGGTGTTGTTC    
JMSF037I21+           GACAACGCGATCGGATTGAGTGTTAGAGAGAGAGAGCTAAGGGATTGGTGTTGTTCT   
JMSF024M21+           GACAACGCGATCGGATTGAGTGTTAGAGAGAGAGAGCTAAGGGATTGGTGTTGTTCTACC
                      ____________________________________________________________
consensus             GACAACGCGATCGGATTGAGTGTTAGAGAGAGAGAGCTAAGGGATTGGTGTTGTTCTACC