Contig 006532:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN002H12Sequence593006532 (3)emb|CDO98221.1|2e-75unnamed protein product [Coffea canephora]
JMFN009N19Sequence614006532 (3)emb|CDO98221.1|2e-75unnamed protein product [Coffea canephora]
JMSF024K16Sequence662006532 (3)emb|CDO98221.1|5e-75unnamed protein product [Coffea canephora]410013915 (4)

Alignment

This contig is upended


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JMFN009N19-                                                        ACTAGTCTCGAGXXX
                      ____________________________________________________________
consensus                                                          ACTAGTCTCGAGNNN
 
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JMFN009N19-           XXXXXXXXXXXXXXXXXXAAGTGTAATCATCAAAACCCGTGAATATTATTGGTCAATGGT
JMSF024K16+                             AAGTGTAATCATCAAAACCCGTGAATATTATTGGTCAATGGT
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNNAAGTGTAATCATCAAAACCCGTGAATATTATTGGTCAATGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN009N19-           GCTCGGGCTATCAATAGATTCTTAGGAAGTCTCAAACAAAATGCCAAATTGGCCATCACT
JMSF024K16+           GCTCGGGCTATCAATAGATTCTTAGGAAGTCTCAAACAAAATGCCAAATTGGCCATCACT
                      ____________________________________________________________
consensus             GCTCGGGCTATCAATAGATTCTTAGGAAGTCTCAAACAAAATGCCAAATTGGCCATCACT
 
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JMFN009N19-           ATAGATAATCTGCAAACAAGTCTACAACTACAAAGCCAGTACTAGTCAGTGAGATTTCAC
JMFN002H12+                                                          AGTGAGATTTCAC
JMSF024K16+           ATAGATAATCTGCAAACAAGTCTACAACTACAAAGCCAGTACTAGTCAGTGAGATTTCAC
                      ____________________________________________________________
consensus             ATAGATAATCTGCAAACAAGTCTACAACTACAAAGCCAGTACTAGTCAGTGAGATTTCAC
 
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JMFN009N19-           ATACTCCTGAACAACATGGAGACCTTCGGTTTCCTCTCCAAAATCCTTCACAACAACACA
JMFN002H12+           ATACTCCTGAACAACATGGAGACCTTCGGTTTCCTCTCCAAAATCCTTCACAACAACACA
JMSF024K16+           ATACTCCTGAACAACATGGAGACCTTCGGTTTCCTCTCCAAAATCCTTCACAACAACACA
                      ____________________________________________________________
consensus             ATACTCCTGAACAACATGGAGACCTTCGGTTTCCTCTCCAAAATCCTTCACAACAACACA
 
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JMFN009N19-           AGAACATCCGACCACCTTCCTAGCTTTCCCCTCTGAATCAATCTTGCACAGACCGGCCCA
JMFN002H12+           AGAACATCCGACCACCTTCCTAGCTTTCCCCTCTGAATCAATCTTGCACAGACCGGCCCA
JMSF024K16+           AGAACATCCGACCACCTTCCTAGCTTTCCCCTCTGAATCAATCTTGCACAGACCGGCCCA
                      ____________________________________________________________
consensus             AGAACATCCGACCACCTTCCTAGCTTTCCCCTCTGAATCAATCTTGCACAGACCGGCCCA
 
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JMFN009N19-           CTCTCCGAGTGTCTTTGCACTAGGAACGGTAATTAGGTTCACGTTGTGGTCTGTACAAAG
JMFN002H12+           CTCTCCGAGTGTCTTTGCACTAGGAACGGTAATTAGGTTCACGTTGTGGTCTGTACAAAG
JMSF024K16+           CTCTCCGAGTGTCTTTGCACTAGGAACGGTAATTAGGTTCACGTTGTGGTCTGTACAAAG
                      ____________________________________________________________
consensus             CTCTCCGAGTGTCTTTGCACTAGGAACGGTAATTAGGTTCACGTTGTGGTCTGTACAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN009N19-           TGCTTTGACCAACTTAACATAATCTGGCTGATCACAGTCCTCTGCTAACACGCACAACTG
JMFN002H12+           TGCTTTGACCAACTTAACATAATCTGGCTGATCACAGTCCTCTGCTAACACGCACAACTG
JMSF024K16+           TGCTTTGACCAACTTAACATAATCTGGCTGATCACAGTCCTCTGCTAACACGCACAACTG
                      ____________________________________________________________
consensus             TGCTTTGACCAACTTAACATAATCTGGCTGATCACAGTCCTCTGCTAACACGCACAACTG
 
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JMFN009N19-           GGCAGCATGCTTCTCAATCACTTTGGCACCTTCATGAAGACCTCGAGTCAACCCACCATG
JMFN002H12+           GGCAGCATGCTTCTCAATCACTTTGGCACCTTCATGAAGACCTCGAGTCAACCCACCATG
JMSF024K16+           GGCAGCATGCTTCTCAATCACTTTGGCACCTTCATGAAGACCTCGAGTCAACCCACCATG
                      ____________________________________________________________
consensus             GGCAGCATGCTTCTCAATCACTTTGGCACCTTCATGAAGACCTCGAGTCAACCCACCATG
 
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JMFN009N19-           GGCCAAGGATTTCCTCAATACAAGCTGCAATGCTGTCATTGTATCCATGGGCTCACCGAG
JMFN002H12+           GGCCAAGGATTTCCTCAATACAAGCTGCAATGCTGTCATTGTATCCATGGGCTCACCGAG
JMSF024K16+           GGCCAAGGATTTCCTCAATACAAGCTGCAATGCTGTCATTGTATCCATGGGCTCACCGAG
                      ____________________________________________________________
consensus             GGCCAAGGATTTCCTCAATACAAGCTGCAATGCTGTCATTGTATCCATGGGCTCACCGAG
 
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JMFN009N19-           AGCAGGAGC                                                   
JMFN002H12+           AGCAGGAGC                                                   
JMSF024K16+           AGCAGGAGCAGGAGCAGGTGCCTCAGCAGCAACATTCTCTTCACCTGACATTTTATCTTG
                      ____________________________________________________________
consensus             AGCAGGAGCAGGAGCAGGTGCCTCAGCAGCAACATTCTCTTCACCTGACATTTTATCTTG
 
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JMSF024K16+           TTATTTCAGCTCTTTGCCTTAATCCTGTAATGAATGCACTGAAGAAACTGTGAGCGACCC
                      ____________________________________________________________
consensus             TTATTTCAGCTCTTTGCCTTAATCCTGTAATGAATGCACTGAAGAAACTGTGAGCGACCC